RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 CNTNAP5Q8WYK1 1306 aa15.57■□□□□ 0.08
LIMS1-205ENST00000410093 ARFGEF1Q9Y6D6 1849 aa15.57■□□□□ 0.08
LIMS1-205ENST00000410093 IKBKBO14920 756 aa15.56■□□□□ 0.08
LIMS1-205ENST00000410093 PRDM1O75626 825 aa15.56■□□□□ 0.08
LIMS1-205ENST00000410093 SCG2P13521 617 aa15.56■□□□□ 0.08
LIMS1-205ENST00000410093 MARCKSP29966 332 aaPredicted RBP15.56■□□□□ 0.08
LIMS1-205ENST00000410093 TOB1P50616 345 aaPredicted RBP15.56■□□□□ 0.08
LIMS1-205ENST00000410093 TFAP4Q01664 338 aa15.56■□□□□ 0.08
LIMS1-205ENST00000410093 PFKFB3Q16875 520 aaPredicted RBP15.56■□□□□ 0.08
LIMS1-205ENST00000410093 STYK1Q6J9G0 422 aa15.56■□□□□ 0.08
LIMS1-205ENST00000410093 STK11IPQ8N1F8 1099 aa15.56■□□□□ 0.08
LIMS1-205ENST00000410093 ZNF219Q9P2Y4 722 aaPredicted RBP15.56■□□□□ 0.08
LIMS1-205ENST00000410093 V9GY48 417 aaPredicted RBP15.56■□□□□ 0.08
LIMS1-205ENST00000410093 USP17L8P0C7I0 530 aa15.55■□□□□ 0.08
LIMS1-205ENST00000410093 TSPY3P0CV98 308 aa15.55■□□□□ 0.08
LIMS1-205ENST00000410093 TSPY8P0CW00 308 aa15.55■□□□□ 0.08
LIMS1-205ENST00000410093 SRGNP10124 158 aa15.55■□□□□ 0.08
LIMS1-205ENST00000410093 GRM4Q14833 912 aa15.55■□□□□ 0.08
LIMS1-205ENST00000410093 PPP4R3BQ5MIZ7 849 aa15.55■□□□□ 0.08
LIMS1-205ENST00000410093 MFSD14BQ5SR56 506 aa15.55■□□□□ 0.08
LIMS1-205ENST00000410093 SOGA3Q5TF21 947 aa15.55■□□□□ 0.08
LIMS1-205ENST00000410093 RCSD1Q6JBY9 416 aa15.55■□□□□ 0.08
LIMS1-205ENST00000410093 C16orf86Q6ZW13 317 aa15.55■□□□□ 0.08
LIMS1-205ENST00000410093 TRIML1Q8N9V2 468 aa15.55■□□□□ 0.08
LIMS1-205ENST00000410093 DACH1Q9UI36 760 aa15.55■□□□□ 0.08
LIMS1-205ENST00000410093 FBXO2Q9UK22 296 aaPredicted RBP15.55■□□□□ 0.08
LIMS1-205ENST00000410093 KCNJ14Q9UNX9 436 aa15.55■□□□□ 0.08
LIMS1-205ENST00000410093 MYO3BQ8WXR4 1341 aa15.54■□□□□ 0.08
LIMS1-205ENST00000410093 C6orf229H3BNL8 230 aa15.54■□□□□ 0.08
LIMS1-205ENST00000410093 BTDP43251 543 aa15.54■□□□□ 0.08
LIMS1-205ENST00000410093 KRBA2Q6ZNG9 492 aa15.54■□□□□ 0.08
LIMS1-205ENST00000410093 TEX11Q8IYF3 940 aa15.54■□□□□ 0.08
LIMS1-205ENST00000410093 PNMA1Q8ND90 353 aa15.54■□□□□ 0.08
LIMS1-205ENST00000410093 CNNM3Q8NE01 707 aa15.54■□□□□ 0.08
LIMS1-205ENST00000410093 CCDC148Q8NFR7 591 aa15.54■□□□□ 0.08
LIMS1-205ENST00000410093 TGFBRAP1Q8WUH2 860 aa15.54■□□□□ 0.08
LIMS1-205ENST00000410093 EYA3Q99504 573 aa15.54■□□□□ 0.08
LIMS1-205ENST00000410093 POLLQ9UGP5 575 aa15.54■□□□□ 0.08
LIMS1-205ENST00000410093 AP5Z1O43299 807 aa15.53■□□□□ 0.08
LIMS1-205ENST00000410093 C21orf2O43822 256 aa15.53■□□□□ 0.08
LIMS1-205ENST00000410093 LMNB1P20700 586 aa15.53■□□□□ 0.08
LIMS1-205ENST00000410093 FAM47AQ5JRC9 791 aa15.53■□□□□ 0.08
LIMS1-205ENST00000410093 C11orf57Q6ZUT1 292 aaPredicted RBP15.53■□□□□ 0.08
LIMS1-205ENST00000410093 DHX40Q8IX18 779 aaKnown RBP15.53■□□□□ 0.08
LIMS1-205ENST00000410093 DRC7Q8IY82 874 aa15.53■□□□□ 0.08
LIMS1-205ENST00000410093 CCDC82Q8N4S0 544 aa15.53■□□□□ 0.08
LIMS1-205ENST00000410093 ZC3H12CQ9C0D7 883 aaKnown RBP15.53■□□□□ 0.08
LIMS1-205ENST00000410093 CABP5Q9NP86 173 aa15.53■□□□□ 0.08
LIMS1-205ENST00000410093 SPTLC3Q9NUV7 552 aa15.53■□□□□ 0.08
LIMS1-205ENST00000410093 IMPACTQ9P2X3 320 aa15.53■□□□□ 0.08
LIMS1-205ENST00000410093 PLEKHA8P1O95397 391 aa15.53■□□□□ 0.08
LIMS1-205ENST00000410093 TPM2P07951 284 aa15.53■□□□□ 0.08
LIMS1-205ENST00000410093 CYP2D6P10635 497 aa15.53■□□□□ 0.08
LIMS1-205ENST00000410093 FKBP1AP62942 108 aaKnown RBP15.53■□□□□ 0.08
LIMS1-205ENST00000410093 RASSF7Q02833 373 aa15.53■□□□□ 0.08
LIMS1-205ENST00000410093 OLFM4Q6UX06 510 aa15.53■□□□□ 0.08
LIMS1-205ENST00000410093 SRBD1Q8N5C6 995 aaKnown RBP15.53■□□□□ 0.08
LIMS1-205ENST00000410093 NEDD1Q8NHV4 660 aa15.53■□□□□ 0.08
LIMS1-205ENST00000410093 CCDC12Q8WUD4 166 aaPredicted RBP15.53■□□□□ 0.08
LIMS1-205ENST00000410093 TNFRSF25Q93038 417 aa15.53■□□□□ 0.08
LIMS1-205ENST00000410093 MRIQ9BWK5 157 aa15.53■□□□□ 0.08
LIMS1-205ENST00000410093 VPS54Q9P1Q0 977 aa15.53■□□□□ 0.08
LIMS1-205ENST00000410093 PLIN4Q96Q06 1357 aa15.52■□□□□ 0.08
LIMS1-205ENST00000410093 NOVP48745 357 aa15.52■□□□□ 0.07
LIMS1-205ENST00000410093 GSDMDP57764 484 aa15.52■□□□□ 0.07
LIMS1-205ENST00000410093 NLRP5P59047 1200 aa15.52■□□□□ 0.07
LIMS1-205ENST00000410093 DIXDC1Q155Q3 683 aa15.52■□□□□ 0.07
LIMS1-205ENST00000410093 NT5DC1Q5TFE4 455 aa15.52■□□□□ 0.07
LIMS1-205ENST00000410093 MPNDQ8N594 471 aa15.52■□□□□ 0.07
LIMS1-205ENST00000410093 DAGLBQ8NCG7 672 aa15.52■□□□□ 0.07
LIMS1-205ENST00000410093 IL17RBQ9NRM6 502 aa15.52■□□□□ 0.07
LIMS1-205ENST00000410093 SWAP70Q9UH65 585 aa15.52■□□□□ 0.07
LIMS1-205ENST00000410093 MYH8P13535 1937 aa15.52■□□□□ 0.07
LIMS1-205ENST00000410093 FLT1P17948 1338 aa15.51■□□□□ 0.07
LIMS1-205ENST00000410093 hCG_1984214I3L0E3 225 aa15.51■□□□□ 0.07
LIMS1-205ENST00000410093 RASA1P20936 1047 aa15.51■□□□□ 0.07
LIMS1-205ENST00000410093 NR5A1Q13285 461 aa15.51■□□□□ 0.07
LIMS1-205ENST00000410093 ARL6IP4Q66PJ3 421 aaKnown RBP15.51■□□□□ 0.07
LIMS1-205ENST00000410093 CMTR1Q8N1G2 835 aaKnown RBP15.51■□□□□ 0.07
LIMS1-205ENST00000410093 ZNF713Q8N859 430 aaPredicted RBP15.51■□□□□ 0.07
LIMS1-205ENST00000410093 CLIP2Q9UDT6 1046 aa15.51■□□□□ 0.07
LIMS1-205ENST00000410093 PCDHB6Q9Y5E3 794 aa15.51■□□□□ 0.07
LIMS1-205ENST00000410093 PALM3A6NDB9 673 aaPredicted RBP15.5■□□□□ 0.07
LIMS1-205ENST00000410093 SMIM22K7EJ46 135 aa15.5■□□□□ 0.07
LIMS1-205ENST00000410093 SMC2O95347 1197 aa15.5■□□□□ 0.07
LIMS1-205ENST00000410093 TOP1P11387 765 aaKnown RBP15.5■□□□□ 0.07
LIMS1-205ENST00000410093 CDK8P49336 464 aa15.5■□□□□ 0.07
LIMS1-205ENST00000410093 RHBDL3P58872 404 aa15.5■□□□□ 0.07
LIMS1-205ENST00000410093 SEMA3FQ13275 785 aa15.5■□□□□ 0.07
LIMS1-205ENST00000410093 NOLC1Q14978 699 aaKnown RBP eCLIP15.5■□□□□ 0.07
LIMS1-205ENST00000410093 TTC38Q5R3I4 469 aa15.5■□□□□ 0.07
LIMS1-205ENST00000410093 HHIPL2Q6UWX4 724 aa15.5■□□□□ 0.07
LIMS1-205ENST00000410093 MLKLQ8NB16 471 aa15.5■□□□□ 0.07
LIMS1-205ENST00000410093 KIAA1524Q8TCG1 905 aa15.5■□□□□ 0.07
LIMS1-205ENST00000410093 SPZ1Q9BXG8 430 aa15.5■□□□□ 0.07
LIMS1-205ENST00000410093 TAOK3Q9H2K8 898 aa15.5■□□□□ 0.07
LIMS1-205ENST00000410093 JAG2Q9Y219 1238 aa15.5■□□□□ 0.07
LIMS1-205ENST00000410093 ZC3H4Q9UPT8 1303 aaKnown RBP15.5■□□□□ 0.07
LIMS1-205ENST00000410093 UBE2Q2LH0YL09 131 aa15.49■□□□□ 0.07
LIMS1-205ENST00000410093 LAD1O00515 517 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 227.9 ms