RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 PDS5AQ29RF7 1337 aaKnown RBP18.93■□□□□ 0.62
LIMS2-208ENST00000410011 ZBTB22O15209 634 aa18.93■□□□□ 0.62
LIMS2-208ENST00000410011 MFAP3LO75121 409 aa18.93■□□□□ 0.62
LIMS2-208ENST00000410011 PLEKHA8P1O95397 391 aa18.93■□□□□ 0.62
LIMS2-208ENST00000410011 CC2D1AQ6P1N0 951 aaPredicted RBP18.93■□□□□ 0.62
LIMS2-208ENST00000410011 CLEC4GQ6UXB4 293 aa18.93■□□□□ 0.62
LIMS2-208ENST00000410011 FAM177A1Q8N128 213 aaPredicted RBP18.93■□□□□ 0.62
LIMS2-208ENST00000410011 GOLGA1Q92805 767 aa18.93■□□□□ 0.62
LIMS2-208ENST00000410011 MRPL44Q9H9J2 332 aaKnown RBP18.93■□□□□ 0.62
LIMS2-208ENST00000410011 SPAG1Q07617 926 aa18.92■□□□□ 0.62
LIMS2-208ENST00000410011 CAVIN4Q5BKX8 364 aa18.92■□□□□ 0.62
LIMS2-208ENST00000410011 CTR9Q6PD62 1173 aa18.92■□□□□ 0.62
LIMS2-208ENST00000410011 CNTNAP5Q8WYK1 1306 aa18.92■□□□□ 0.62
LIMS2-208ENST00000410011 CCDC66A2RUB6 948 aa18.92■□□□□ 0.62
LIMS2-208ENST00000410011 ATP6V1AP38606 617 aa18.92■□□□□ 0.62
LIMS2-208ENST00000410011 PTGDRQ13258 359 aa18.92■□□□□ 0.62
LIMS2-208ENST00000410011 ARL6IP4Q66PJ3 421 aaKnown RBP18.92■□□□□ 0.62
LIMS2-208ENST00000410011 RAD9BQ6WBX8 426 aa18.92■□□□□ 0.62
LIMS2-208ENST00000410011 RWDD2AQ9UIY3 292 aa18.92■□□□□ 0.62
LIMS2-208ENST00000410011 DOT1LQ8TEK3 1739 aa18.92■□□□□ 0.62
LIMS2-208ENST00000410011 WNK3Q9BYP7 1800 aa18.91■□□□□ 0.62
LIMS2-208ENST00000410011 SOWAHDA6NJG2 315 aa18.91■□□□□ 0.62
LIMS2-208ENST00000410011 SEMA3FQ13275 785 aa18.91■□□□□ 0.62
LIMS2-208ENST00000410011 TMTC1Q8IUR5 882 aa18.91■□□□□ 0.62
LIMS2-208ENST00000410011 ANKRD18AQ8IVF6 992 aa18.91■□□□□ 0.62
LIMS2-208ENST00000410011 TTF2Q9UNY4 1162 aaKnown RBP18.91■□□□□ 0.62
LIMS2-208ENST00000410011 ZNF652Q9Y2D9 606 aa18.91■□□□□ 0.62
LIMS2-208ENST00000410011 MYH2Q9UKX2 1941 aa18.91■□□□□ 0.62
LIMS2-208ENST00000410011 STRCQ7RTU9 1775 aa18.91■□□□□ 0.62
LIMS2-208ENST00000410011 COL1A1P02452 1464 aaPredicted RBP18.91■□□□□ 0.62
LIMS2-208ENST00000410011 RGL2O15211 777 aa18.91■□□□□ 0.62
LIMS2-208ENST00000410011 GTPBP6O43824 516 aaPredicted RBP18.91■□□□□ 0.62
LIMS2-208ENST00000410011 KIF5CO60282 957 aa18.91■□□□□ 0.62
LIMS2-208ENST00000410011 TBC1D8O95759 1140 aa18.91■□□□□ 0.62
LIMS2-208ENST00000410011 TXLNAP40222 546 aa18.91■□□□□ 0.62
LIMS2-208ENST00000410011 TRIM14Q14142 442 aa18.91■□□□□ 0.62
LIMS2-208ENST00000410011 ZNF174Q15697 407 aa18.91■□□□□ 0.62
LIMS2-208ENST00000410011 PDXDC2PQ6P474 469 aa18.91■□□□□ 0.62
LIMS2-208ENST00000410011 CCDC12Q8WUD4 166 aaPredicted RBP18.91■□□□□ 0.62
LIMS2-208ENST00000410011 DESI2Q9BSY9 194 aa18.91■□□□□ 0.62
LIMS2-208ENST00000410011 ZNF335Q9H4Z2 1342 aaPredicted RBP18.91■□□□□ 0.62
LIMS2-208ENST00000410011 LOC102724428A0A0B4J2F2 783 aa18.9■□□□□ 0.62
LIMS2-208ENST00000410011 CCDC151A5D8V7 595 aa18.9■□□□□ 0.62
LIMS2-208ENST00000410011 WNT7AO00755 349 aa18.9■□□□□ 0.62
LIMS2-208ENST00000410011 PRDM1O75626 825 aa18.9■□□□□ 0.62
LIMS2-208ENST00000410011 GYG1P46976 350 aa18.9■□□□□ 0.62
LIMS2-208ENST00000410011 SIK1P57059 783 aa18.9■□□□□ 0.62
LIMS2-208ENST00000410011 MTF1Q14872 753 aa18.9■□□□□ 0.62
LIMS2-208ENST00000410011 BRD3Q15059 726 aa18.9■□□□□ 0.62
LIMS2-208ENST00000410011 SRGAP1Q7Z6B7 1085 aa18.9■□□□□ 0.62
LIMS2-208ENST00000410011 CEP112Q8N8E3 955 aa18.9■□□□□ 0.62
LIMS2-208ENST00000410011 CTCFLQ8NI51 663 aaPredicted RBP18.9■□□□□ 0.62
LIMS2-208ENST00000410011 ARFGAP3Q9NP61 516 aa18.9■□□□□ 0.62
LIMS2-208ENST00000410011 RMND1Q9NWS8 449 aa18.9■□□□□ 0.62
LIMS2-208ENST00000410011 MYO1AQ9UBC5 1043 aa18.9■□□□□ 0.62
LIMS2-208ENST00000410011 XDHP47989 1333 aa18.9■□□□□ 0.62
LIMS2-208ENST00000410011 SCG2P13521 617 aa18.9■□□□□ 0.62
LIMS2-208ENST00000410011 CYP2C19P33261 490 aa18.9■□□□□ 0.62
LIMS2-208ENST00000410011 PFKFB3Q16875 520 aaPredicted RBP18.9■□□□□ 0.62
LIMS2-208ENST00000410011 KLHL10Q6JEL2 608 aa18.9■□□□□ 0.62
LIMS2-208ENST00000410011 SRBD1Q8N5C6 995 aaKnown RBP18.9■□□□□ 0.62
LIMS2-208ENST00000410011 FAM84BQ96KN1 310 aaPredicted RBP18.9■□□□□ 0.62
LIMS2-208ENST00000410011 PARD6BQ9BYG5 372 aa18.9■□□□□ 0.62
LIMS2-208ENST00000410011 CDC23Q9UJX2 597 aa18.9■□□□□ 0.62
LIMS2-208ENST00000410011 POTEB2H3BUK9 544 aa18.89■□□□□ 0.61
LIMS2-208ENST00000410011 GYPCP04921 128 aa18.89■□□□□ 0.61
LIMS2-208ENST00000410011 SBK1Q52WX2 424 aa18.89■□□□□ 0.61
LIMS2-208ENST00000410011 FBXO33Q7Z6M2 555 aa18.89■□□□□ 0.61
LIMS2-208ENST00000410011 ZNF384Q8TF68 577 aa18.89■□□□□ 0.61
LIMS2-208ENST00000410011 HNRNPLLQ8WVV9 542 aaKnown RBP18.89■□□□□ 0.61
LIMS2-208ENST00000410011 ST7Q9NRC1 585 aa18.89■□□□□ 0.61
LIMS2-208ENST00000410011 ATP8A2Q9NTI2 1148 aa18.89■□□□□ 0.61
LIMS2-208ENST00000410011 KAT6BQ8WYB5 2073 aa18.89■□□□□ 0.61
LIMS2-208ENST00000410011 SMIM22K7EJ46 135 aa18.89■□□□□ 0.61
LIMS2-208ENST00000410011 CASP14P31944 242 aa18.89■□□□□ 0.61
LIMS2-208ENST00000410011 LONP1P36776 959 aaKnown RBP18.89■□□□□ 0.61
LIMS2-208ENST00000410011 STX17P56962 302 aa18.89■□□□□ 0.61
LIMS2-208ENST00000410011 DYNLL1P63167 89 aaKnown RBP18.89■□□□□ 0.61
LIMS2-208ENST00000410011 KARSQ15046 597 aaKnown RBP18.89■□□□□ 0.61
LIMS2-208ENST00000410011 TEX35Q5T0J7 233 aa18.89■□□□□ 0.61
LIMS2-208ENST00000410011 MSL3Q8N5Y2 521 aaKnown RBP18.89■□□□□ 0.61
LIMS2-208ENST00000410011 SH3GLB2Q9NR46 395 aa18.89■□□□□ 0.61
LIMS2-208ENST00000410011 THRAP3Q9Y2W1 955 aaKnown RBP18.89■□□□□ 0.61
LIMS2-208ENST00000410011 A0A1B0GUL6 1792 aa18.88■□□□□ 0.61
LIMS2-208ENST00000410011 USP17L12C9JPN9 530 aa18.88■□□□□ 0.61
LIMS2-208ENST00000410011 USP17L21D6R901 530 aa18.88■□□□□ 0.61
LIMS2-208ENST00000410011 CALML3P27482 149 aa18.88■□□□□ 0.61
LIMS2-208ENST00000410011 ZNF658Q5TYW1 1059 aaPredicted RBP18.88■□□□□ 0.61
LIMS2-208ENST00000410011 NSUN4Q96CB9 384 aaKnown RBP18.88■□□□□ 0.61
LIMS2-208ENST00000410011 MINPP1Q9UNW1 487 aa18.88■□□□□ 0.61
LIMS2-208ENST00000410011 ITPK1Q13572 414 aa18.88■□□□□ 0.61
LIMS2-208ENST00000410011 KRT31Q15323 416 aa18.88■□□□□ 0.61
LIMS2-208ENST00000410011 ANKRD20A12PQ8NF67 263 aa18.88■□□□□ 0.61
LIMS2-208ENST00000410011 CASP1P29466 404 aa18.87■□□□□ 0.61
LIMS2-208ENST00000410011 PAK1Q13153 545 aa18.87■□□□□ 0.61
LIMS2-208ENST00000410011 MTRQ99707 1265 aa18.87■□□□□ 0.61
LIMS2-208ENST00000410011 SCN7AQ01118 1682 aa18.87■□□□□ 0.61
LIMS2-208ENST00000410011 CYP2D7A0A087X1C5 515 aa18.86■□□□□ 0.61
LIMS2-208ENST00000410011 hCG_1642624A0A1W2PR95 340 aa18.86■□□□□ 0.61
LIMS2-208ENST00000410011 SASH3O75995 380 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms