RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 CRNKL1Q9BZJ0 848 aaKnown RBP27.17■■□□□ 1.94
PMS1-205ENST00000409985 CABP5Q9NP86 173 aa27.17■■□□□ 1.94
PMS1-205ENST00000409985 BMP6P22004 513 aa27.16■■□□□ 1.94
PMS1-205ENST00000409985 CHRNA5P30532 468 aa27.16■■□□□ 1.94
PMS1-205ENST00000409985 TMTC3Q6ZXV5 915 aa27.16■■□□□ 1.94
PMS1-205ENST00000409985 SERTAD1Q9UHV2 236 aa27.16■■□□□ 1.94
PMS1-205ENST00000409985 MYH2Q9UKX2 1941 aa27.15■■□□□ 1.94
PMS1-205ENST00000409985 SRGNP10124 158 aa27.15■■□□□ 1.94
PMS1-205ENST00000409985 ISM2Q6H9L7 571 aa27.15■■□□□ 1.94
PMS1-205ENST00000409985 OXER1Q8TDS5 423 aa27.15■■□□□ 1.94
PMS1-205ENST00000409985 CELF1Q92879 486 aaKnown RBP27.15■■□□□ 1.94
PMS1-205ENST00000409985 ARPP21Q9UBL0 812 aaPredicted RBP27.15■■□□□ 1.94
PMS1-205ENST00000409985 ZNF18P17022 549 aa27.15■■□□□ 1.94
PMS1-205ENST00000409985 TRAPPC10P48553 1259 aa27.15■■□□□ 1.94
PMS1-205ENST00000409985 DYNLL1P63167 89 aaKnown RBP27.15■■□□□ 1.94
PMS1-205ENST00000409985 CFAP100Q494V2 611 aa27.15■■□□□ 1.94
PMS1-205ENST00000409985 PPP1R13BQ96KQ4 1090 aa27.15■■□□□ 1.94
PMS1-205ENST00000409985 FANCLQ9NW38 375 aa27.15■■□□□ 1.94
PMS1-205ENST00000409985 CGNQ9P2M7 1197 aaKnown RBP27.15■■□□□ 1.94
PMS1-205ENST00000409985 MYH13Q9UKX3 1938 aa27.15■■□□□ 1.94
PMS1-205ENST00000409985 HIBADHP31937 336 aaKnown RBP27.14■■□□□ 1.94
PMS1-205ENST00000409985 CCDC82Q8N4S0 544 aa27.14■■□□□ 1.94
PMS1-205ENST00000409985 TNFRSF25Q93038 417 aa27.14■■□□□ 1.94
PMS1-205ENST00000409985 FEZ1Q99689 392 aa27.14■■□□□ 1.94
PMS1-205ENST00000409985 PYM1Q9BRP8 204 aaKnown RBP27.14■■□□□ 1.94
PMS1-205ENST00000409985 CMTR1Q8N1G2 835 aaKnown RBP27.13■■□□□ 1.93
PMS1-205ENST00000409985 ERO1AQ96HE7 468 aa27.13■■□□□ 1.93
PMS1-205ENST00000409985 CSRNP2Q9H175 543 aa27.13■■□□□ 1.93
PMS1-205ENST00000409985 BAZ2AQ9UIF9 1905 aaKnown RBP27.13■■□□□ 1.93
PMS1-205ENST00000409985 USP17L12C9JPN9 530 aa27.13■■□□□ 1.93
PMS1-205ENST00000409985 USP17L21D6R901 530 aa27.13■■□□□ 1.93
PMS1-205ENST00000409985 TOP1P11387 765 aaKnown RBP27.13■■□□□ 1.93
PMS1-205ENST00000409985 MECOMQ03112 1051 aa27.13■■□□□ 1.93
PMS1-205ENST00000409985 GRIN1Q05586 938 aa27.13■■□□□ 1.93
PMS1-205ENST00000409985 SPTY2D1Q68D10 685 aaPredicted RBP27.13■■□□□ 1.93
PMS1-205ENST00000409985 SH3RF1Q7Z6J0 888 aa27.13■■□□□ 1.93
PMS1-205ENST00000409985 L2HGDHQ9H9P8 463 aa27.13■■□□□ 1.93
PMS1-205ENST00000409985 TRMT1Q9NXH9 659 aaKnown RBP27.13■■□□□ 1.93
PMS1-205ENST00000409985 SLFN14P0C7P3 912 aa27.12■■□□□ 1.93
PMS1-205ENST00000409985 KCNA3P22001 575 aa27.12■■□□□ 1.93
PMS1-205ENST00000409985 PDE6BP35913 854 aa27.12■■□□□ 1.93
PMS1-205ENST00000409985 PDE4BQ07343 736 aa27.12■■□□□ 1.93
PMS1-205ENST00000409985 TBX2Q13207 712 aaPredicted RBP27.12■■□□□ 1.93
PMS1-205ENST00000409985 SHISA4Q96DD7 197 aa27.12■■□□□ 1.93
PMS1-205ENST00000409985 DCP1AQ9NPI6 582 aaPredicted RBP27.12■■□□□ 1.93
PMS1-205ENST00000409985 V9GY48 417 aaPredicted RBP27.12■■□□□ 1.93
PMS1-205ENST00000409985 HOXA10P31260 410 aaPredicted RBP27.11■■□□□ 1.93
PMS1-205ENST00000409985 CTCFLQ8NI51 663 aaPredicted RBP27.11■■□□□ 1.93
PMS1-205ENST00000409985 ZNF592Q92610 1267 aa27.11■■□□□ 1.93
PMS1-205ENST00000409985 DPF2Q92785 391 aa27.11■■□□□ 1.93
PMS1-205ENST00000409985 VPS54Q9P1Q0 977 aa27.11■■□□□ 1.93
PMS1-205ENST00000409985 CCDC88AQ3V6T2 1871 aa27.11■■□□□ 1.93
PMS1-205ENST00000409985 FOXN1O15353 648 aa27.1■■□□□ 1.93
PMS1-205ENST00000409985 PLCD1P51178 756 aa27.1■■□□□ 1.93
PMS1-205ENST00000409985 SPECC1Q5M775 1068 aa27.1■■□□□ 1.93
PMS1-205ENST00000409985 C2CD5Q86YS7 1000 aa27.1■■□□□ 1.93
PMS1-205ENST00000409985 CNTNAP5Q8WYK1 1306 aa27.1■■□□□ 1.93
PMS1-205ENST00000409985 PPP4R3BQ5MIZ7 849 aa27.1■■□□□ 1.93
PMS1-205ENST00000409985 CCDC178Q5BJE1 867 aa27.09■■□□□ 1.93
PMS1-205ENST00000409985 SMAP1Q8IYB5 467 aaPredicted RBP27.09■■□□□ 1.93
PMS1-205ENST00000409985 FAM177A1Q8N128 213 aaPredicted RBP27.09■■□□□ 1.93
PMS1-205ENST00000409985 ANKS1AQ92625 1134 aa27.09■■□□□ 1.93
PMS1-205ENST00000409985 GSDMAQ96QA5 445 aa27.09■■□□□ 1.93
PMS1-205ENST00000409985 ARHGAP6O43182 974 aa27.08■■□□□ 1.93
PMS1-205ENST00000409985 SLU7O95391 586 aaKnown RBP27.08■■□□□ 1.93
PMS1-205ENST00000409985 PLEKHA8P1O95397 391 aa27.08■■□□□ 1.93
PMS1-205ENST00000409985 DPEP1P16444 411 aa27.08■■□□□ 1.93
PMS1-205ENST00000409985 NPY5RQ15761 445 aa27.08■■□□□ 1.93
PMS1-205ENST00000409985 PPP1R1BQ9UD71 204 aaPredicted RBP27.08■■□□□ 1.93
PMS1-205ENST00000409985 TAOK2Q9UL54 1235 aa27.08■■□□□ 1.93
PMS1-205ENST00000409985 NFE2L3Q9Y4A8 694 aa27.08■■□□□ 1.93
PMS1-205ENST00000409985 PRR29P0C7W0 189 aa27.08■■□□□ 1.93
PMS1-205ENST00000409985 KIF5BP33176 963 aa27.08■■□□□ 1.93
PMS1-205ENST00000409985 RPGRQ92834 1020 aaKnown RBP27.08■■□□□ 1.93
PMS1-205ENST00000409985 SH3GLB2Q9NR46 395 aa27.08■■□□□ 1.93
PMS1-205ENST00000409985 PHLPP2Q6ZVD8 1323 aa27.08■■□□□ 1.93
PMS1-205ENST00000409985 IRS2Q9Y4H2 1338 aa27.08■■□□□ 1.93
PMS1-205ENST00000409985 CYP2D7A0A087X1C5 515 aa27.07■■□□□ 1.92
PMS1-205ENST00000409985 GOLGA6L9A6NEM1 432 aa27.07■■□□□ 1.92
PMS1-205ENST00000409985 ZSCAN12O43309 604 aa27.07■■□□□ 1.92
PMS1-205ENST00000409985 ATP2C1P98194 919 aaPredicted RBP27.07■■□□□ 1.92
PMS1-205ENST00000409985 WTIPA6NIX2 430 aaPredicted RBP27.06■■□□□ 1.92
PMS1-205ENST00000409985 NLGN2Q8NFZ4 835 aa27.06■■□□□ 1.92
PMS1-205ENST00000409985 INTS13Q9NVM9 706 aa27.06■■□□□ 1.92
PMS1-205ENST00000409985 H0YIN7 160 aa27.06■■□□□ 1.92
PMS1-205ENST00000409985 STX10O60499 249 aa27.06■■□□□ 1.92
PMS1-205ENST00000409985 SCG2P13521 617 aa27.06■■□□□ 1.92
PMS1-205ENST00000409985 NPR1P16066 1061 aa27.06■■□□□ 1.92
PMS1-205ENST00000409985 ETF1P62495 437 aaKnown RBP27.06■■□□□ 1.92
PMS1-205ENST00000409985 PFKFB3Q16875 520 aaPredicted RBP27.06■■□□□ 1.92
PMS1-205ENST00000409985 TTC38Q5R3I4 469 aa27.06■■□□□ 1.92
PMS1-205ENST00000409985 SPECC1LQ69YQ0 1117 aa27.06■■□□□ 1.92
PMS1-205ENST00000409985 DGKHQ86XP1 1220 aa27.06■■□□□ 1.92
PMS1-205ENST00000409985 MASTLQ96GX5 879 aa27.06■■□□□ 1.92
PMS1-205ENST00000409985 CALML3P27482 149 aa27.05■■□□□ 1.92
PMS1-205ENST00000409985 FMR1Q06787 632 aaKnown RBP eCLIP27.05■■□□□ 1.92
PMS1-205ENST00000409985 GRAPQ13588 217 aa27.05■■□□□ 1.92
PMS1-205ENST00000409985 CCDC93Q567U6 631 aa27.05■■□□□ 1.92
PMS1-205ENST00000409985 SLX4Q8IY92 1834 aa27.05■■□□□ 1.92
PMS1-205ENST00000409985 SRBD1Q8N5C6 995 aaKnown RBP27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms