RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 SLC15A5A6NIM6 579 aa17.71■□□□□ 0.43
CBX3-203ENST00000409747 COG2Q14746 738 aa17.71■□□□□ 0.43
CBX3-203ENST00000409747 LRRFIP1Q32MZ4 808 aaKnown RBP17.71■□□□□ 0.43
CBX3-203ENST00000409747 KBTBD3Q8NAB2 608 aa17.71■□□□□ 0.43
CBX3-203ENST00000409747 PUS7LQ9H0K6 701 aaKnown RBP17.71■□□□□ 0.43
CBX3-203ENST00000409747 A0A0G2JMZ2 1700 aa17.71■□□□□ 0.42
CBX3-203ENST00000409747 ZFYP08048 801 aaPredicted RBP17.7■□□□□ 0.42
CBX3-203ENST00000409747 AKR1B1P15121 316 aa17.7■□□□□ 0.42
CBX3-203ENST00000409747 CDK8P49336 464 aa17.7■□□□□ 0.42
CBX3-203ENST00000409747 CHRDL2Q6WN34 429 aa17.7■□□□□ 0.42
CBX3-203ENST00000409747 MB21D1Q8N884 522 aa17.7■□□□□ 0.42
CBX3-203ENST00000409747 BTBD7Q9P203 1132 aa17.7■□□□□ 0.42
CBX3-203ENST00000409747 OGDHLQ9ULD0 1010 aa17.7■□□□□ 0.42
CBX3-203ENST00000409747 TMX2Q9Y320 296 aa17.7■□□□□ 0.42
CBX3-203ENST00000409747 PTPREP23469 700 aa17.69■□□□□ 0.42
CBX3-203ENST00000409747 NBPF3Q9H094 633 aa17.69■□□□□ 0.42
CBX3-203ENST00000409747 CYP2D7A0A087X1C5 515 aa17.69■□□□□ 0.42
CBX3-203ENST00000409747 CHGBP05060 677 aa17.69■□□□□ 0.42
CBX3-203ENST00000409747 CACNB2Q08289 660 aaPredicted RBP17.69■□□□□ 0.42
CBX3-203ENST00000409747 GRB14Q14449 540 aa17.69■□□□□ 0.42
CBX3-203ENST00000409747 MFSD14CQ5VZR4 134 aa17.69■□□□□ 0.42
CBX3-203ENST00000409747 GIMAP6Q6P9H5 292 aa17.69■□□□□ 0.42
CBX3-203ENST00000409747 CTR9Q6PD62 1173 aa17.69■□□□□ 0.42
CBX3-203ENST00000409747 APPBP2Q92624 585 aa17.69■□□□□ 0.42
CBX3-203ENST00000409747 VCPKMTQ9H867 229 aa17.69■□□□□ 0.42
CBX3-203ENST00000409747 KANSL2Q9H9L4 492 aa17.69■□□□□ 0.42
CBX3-203ENST00000409747 ZNF236Q9UL36 1845 aa17.69■□□□□ 0.42
CBX3-203ENST00000409747 TTC41PQ6P2S7 1318 aa17.68■□□□□ 0.42
CBX3-203ENST00000409747 WDR46O15213 610 aaKnown RBP17.68■□□□□ 0.42
CBX3-203ENST00000409747 HOXC6P09630 235 aa17.68■□□□□ 0.42
CBX3-203ENST00000409747 FXR1P51114 621 aaKnown RBP eCLIP17.68■□□□□ 0.42
CBX3-203ENST00000409747 CCL14Q16627 93 aa17.68■□□□□ 0.42
CBX3-203ENST00000409747 SHCBP1Q8NEM2 672 aa17.68■□□□□ 0.42
CBX3-203ENST00000409747 DIS3LQ8TF46 1054 aaKnown RBP17.68■□□□□ 0.42
CBX3-203ENST00000409747 STRBPQ96SI9 672 aaKnown RBP17.68■□□□□ 0.42
CBX3-203ENST00000409747 ERC2O15083 957 aa17.67■□□□□ 0.42
CBX3-203ENST00000409747 GNAT2P19087 354 aa17.67■□□□□ 0.42
CBX3-203ENST00000409747 C11orf49Q9H6J7 331 aa17.67■□□□□ 0.42
CBX3-203ENST00000409747 RNF113AO15541 343 aaKnown RBP17.67■□□□□ 0.42
CBX3-203ENST00000409747 STRNO43815 780 aa17.67■□□□□ 0.42
CBX3-203ENST00000409747 FLOT1O75955 427 aa17.67■□□□□ 0.42
CBX3-203ENST00000409747 DSG3P32926 999 aa17.67■□□□□ 0.42
CBX3-203ENST00000409747 SBK1Q52WX2 424 aa17.67■□□□□ 0.42
CBX3-203ENST00000409747 CLEC10AQ8IUN9 316 aa17.67■□□□□ 0.42
CBX3-203ENST00000409747 SPATC1LQ9H0A9 340 aa17.67■□□□□ 0.42
CBX3-203ENST00000409747 GOPCQ9HD26 462 aa17.67■□□□□ 0.42
CBX3-203ENST00000409747 RLFQ13129 1914 aa17.66■□□□□ 0.42
CBX3-203ENST00000409747 ATP2B2Q01814 1243 aa17.66■□□□□ 0.42
CBX3-203ENST00000409747 SIAH1Q8IUQ4 282 aa17.66■□□□□ 0.42
CBX3-203ENST00000409747 SPICE1Q8N0Z3 855 aa17.66■□□□□ 0.42
CBX3-203ENST00000409747 MOV10L1Q9BXT6 1211 aaKnown RBP17.66■□□□□ 0.42
CBX3-203ENST00000409747 ROBO3Q96MS0 1386 aa17.66■□□□□ 0.42
CBX3-203ENST00000409747 MSCO60682 206 aa17.65■□□□□ 0.42
CBX3-203ENST00000409747 EEF2P13639 858 aaKnown RBP17.65■□□□□ 0.42
CBX3-203ENST00000409747 CCND3P30281 292 aaPredicted RBP17.65■□□□□ 0.42
CBX3-203ENST00000409747 KIAA1755Q5JYT7 1200 aa17.65■□□□□ 0.42
CBX3-203ENST00000409747 TSHZ3Q63HK5 1081 aa17.65■□□□□ 0.42
CBX3-203ENST00000409747 OSBP2Q969R2 916 aa17.65■□□□□ 0.42
CBX3-203ENST00000409747 MROH8Q9H579 483 aa17.65■□□□□ 0.42
CBX3-203ENST00000409747 ZNF287Q9HBT7 754 aa17.65■□□□□ 0.42
CBX3-203ENST00000409747 SLC5A4Q9NY91 659 aa17.65■□□□□ 0.42
CBX3-203ENST00000409747 RBM27Q9P2N5 1060 aaKnown RBP17.65■□□□□ 0.42
CBX3-203ENST00000409747 ALPK3Q96L96 1907 aa17.65■□□□□ 0.42
CBX3-203ENST00000409747 PARP14Q460N5 1801 aa17.64■□□□□ 0.42
CBX3-203ENST00000409747 GSG1L2A8MUP6 293 aa17.64■□□□□ 0.41
CBX3-203ENST00000409747 GPAA1O43292 621 aa17.64■□□□□ 0.41
CBX3-203ENST00000409747 RRP1P56182 461 aaKnown RBP17.64■□□□□ 0.41
CBX3-203ENST00000409747 DPP9Q86TI2 863 aa17.64■□□□□ 0.41
CBX3-203ENST00000409747 MKNK2Q9HBH9 465 aa17.64■□□□□ 0.41
CBX3-203ENST00000409747 ZBTB47Q9UFB7 747 aaPredicted RBP17.64■□□□□ 0.41
CBX3-203ENST00000409747 PCDHB15Q9Y5E8 787 aa17.64■□□□□ 0.41
CBX3-203ENST00000409747 GREB1LQ9C091 1923 aaPredicted RBP17.64■□□□□ 0.41
CBX3-203ENST00000409747 RANBP2P49792 3224 aaKnown RBP17.64■□□□□ 0.41
CBX3-203ENST00000409747 A0A1W2PPC1 479 aa17.64■□□□□ 0.41
CBX3-203ENST00000409747 SMIM22K7EJ46 135 aa17.64■□□□□ 0.41
CBX3-203ENST00000409747 ERCC3P19447 782 aa17.64■□□□□ 0.41
CBX3-203ENST00000409747 ADORA2AP29274 412 aa17.64■□□□□ 0.41
CBX3-203ENST00000409747 TDO2P48775 406 aa17.64■□□□□ 0.41
CBX3-203ENST00000409747 MNX1P50219 401 aaPredicted RBP17.64■□□□□ 0.41
CBX3-203ENST00000409747 PLS1Q14651 629 aa17.64■□□□□ 0.41
CBX3-203ENST00000409747 ABRAQ8N0Z2 381 aa17.64■□□□□ 0.41
CBX3-203ENST00000409747 ATG4CQ96DT6 458 aa17.64■□□□□ 0.41
CBX3-203ENST00000409747 FRMPD3Q5JV73 1810 aa17.63■□□□□ 0.41
CBX3-203ENST00000409747 MINDY4BA8MYZ0 360 aa17.63■□□□□ 0.41
CBX3-203ENST00000409747 OLFML2BQ68BL8 750 aa17.63■□□□□ 0.41
CBX3-203ENST00000409747 LHX8Q68G74 356 aa17.63■□□□□ 0.41
CBX3-203ENST00000409747 PRO3102Q9H379 93 aa17.63■□□□□ 0.41
CBX3-203ENST00000409747 FLRT1Q9NZU1 646 aa17.63■□□□□ 0.41
CBX3-203ENST00000409747 SLC25A27O95847 323 aa17.62■□□□□ 0.41
CBX3-203ENST00000409747 APPP05067 770 aa17.62■□□□□ 0.41
CBX3-203ENST00000409747 NCAPG2Q86XI2 1143 aa17.62■□□□□ 0.41
CBX3-203ENST00000409747 C7orf61Q8IZ16 206 aa17.62■□□□□ 0.41
CBX3-203ENST00000409747 NPLOC4Q8TAT6 608 aa17.62■□□□□ 0.41
CBX3-203ENST00000409747 NACAP1Q9BZK3 213 aa17.62■□□□□ 0.41
CBX3-203ENST00000409747 TRIOBPQ9H2D6 2365 aa17.61■□□□□ 0.41
CBX3-203ENST00000409747 RAD21O60216 631 aa17.61■□□□□ 0.41
CBX3-203ENST00000409747 MX1P20591 662 aa17.61■□□□□ 0.41
CBX3-203ENST00000409747 RASA1P20936 1047 aa17.61■□□□□ 0.41
CBX3-203ENST00000409747 SAMD1Q6SPF0 538 aaPredicted RBP17.61■□□□□ 0.41
CBX3-203ENST00000409747 PI4K2BQ8TCG2 481 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms