RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 DCAF8Q5TAQ9 597 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 BRAPQ7Z569 592 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 CTAGE6Q86UF2 777 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 CTAGE4Q8IX94 777 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 FAM76AQ8TAV0 307 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 USP28Q96RU2 1077 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 SH3GL2Q99962 352 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 STK31Q9BXU1 1019 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 USP44Q9H0E7 712 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 RFX7Q2KHR2 1363 aa12.02□□□□□ -0.49
NIF3L1-204ENST00000409357 LRRIQ3A6PVS8 624 aaPredicted RBP12.02□□□□□ -0.49
NIF3L1-204ENST00000409357 ATP5J2-PTCD1G3V325 749 aa12.02□□□□□ -0.49
NIF3L1-204ENST00000409357 EIF3HO15372 352 aaKnown RBP eCLIP12.02□□□□□ -0.49
NIF3L1-204ENST00000409357 RTN2O75298 545 aa12.02□□□□□ -0.49
NIF3L1-204ENST00000409357 UBTFL1P0CB47 393 aaPredicted RBP12.02□□□□□ -0.49
NIF3L1-204ENST00000409357 EPB41P11171 864 aaKnown RBP12.02□□□□□ -0.49
NIF3L1-204ENST00000409357 LMNB1P20700 586 aa12.02□□□□□ -0.49
NIF3L1-204ENST00000409357 NF2P35240 595 aa12.02□□□□□ -0.49
NIF3L1-204ENST00000409357 LIG3P49916 1009 aa12.02□□□□□ -0.49
NIF3L1-204ENST00000409357 SLC8A3P57103 927 aa12.02□□□□□ -0.49
NIF3L1-204ENST00000409357 VSNL1P62760 191 aa12.02□□□□□ -0.49
NIF3L1-204ENST00000409357 TCIRG1Q13488 830 aa12.02□□□□□ -0.49
NIF3L1-204ENST00000409357 ANKRD13DQ6ZTN6 518 aa12.02□□□□□ -0.49
NIF3L1-204ENST00000409357 G2E3Q7L622 706 aa12.02□□□□□ -0.49
NIF3L1-204ENST00000409357 TC2NQ8N9U0 490 aa12.02□□□□□ -0.49
NIF3L1-204ENST00000409357 PLBD2Q8NHP8 589 aa12.02□□□□□ -0.49
NIF3L1-204ENST00000409357 COG1Q8WTW3 980 aa12.02□□□□□ -0.49
NIF3L1-204ENST00000409357 ZKSCAN4Q969J2 545 aaPredicted RBP12.02□□□□□ -0.49
NIF3L1-204ENST00000409357 CREBZFQ9NS37 354 aa12.02□□□□□ -0.49
NIF3L1-204ENST00000409357 POLR3EQ9NVU0 708 aa12.02□□□□□ -0.49
NIF3L1-204ENST00000409357 HPCAL4Q9UM19 191 aa12.02□□□□□ -0.49
NIF3L1-204ENST00000409357 PCDHA7Q9UN72 937 aa12.02□□□□□ -0.49
NIF3L1-204ENST00000409357 A0A1B0GUA9 196 aa12.01□□□□□ -0.49
NIF3L1-204ENST00000409357 CTAGE9A4FU28 777 aa12.01□□□□□ -0.49
NIF3L1-204ENST00000409357 MEFVO15553 781 aaPredicted RBP12.01□□□□□ -0.49
NIF3L1-204ENST00000409357 SURF6O75683 361 aaKnown RBP12.01□□□□□ -0.49
NIF3L1-204ENST00000409357 HMGB1P09429 215 aaKnown RBP12.01□□□□□ -0.49
NIF3L1-204ENST00000409357 NBPF7P0C2Y1 421 aaPredicted RBP12.01□□□□□ -0.49
NIF3L1-204ENST00000409357 CMA1P23946 247 aa12.01□□□□□ -0.49
NIF3L1-204ENST00000409357 FLIIQ13045 1269 aa12.01□□□□□ -0.49
NIF3L1-204ENST00000409357 PARP10Q53GL7 1025 aa12.01□□□□□ -0.49
NIF3L1-204ENST00000409357 SLC4A10Q6U841 1118 aa12.01□□□□□ -0.49
NIF3L1-204ENST00000409357 UBE3BQ7Z3V4 1068 aa12.01□□□□□ -0.49
NIF3L1-204ENST00000409357 RNF217Q8TC41 542 aa12.01□□□□□ -0.49
NIF3L1-204ENST00000409357 FAM210AQ96ND0 272 aa12.01□□□□□ -0.49
NIF3L1-204ENST00000409357 BATF3Q9NR55 127 aa12.01□□□□□ -0.49
NIF3L1-204ENST00000409357 SALL1Q9NSC2 1324 aa12.01□□□□□ -0.49
NIF3L1-204ENST00000409357 GOLGA8KD6RF30 607 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 SERPINC1P01008 464 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 ME1P48163 572 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 SPECC1LQ69YQ0 1117 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 RASGRP2Q7LDG7 609 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 PPP1R42Q7Z4L9 355 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 MAB21L3Q8N8X9 362 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 IGSF22Q8N9C0 903 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 LINC00301Q8NCQ3 95 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 CCDC51Q96ER9 411 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 AGXT2Q9BYV1 514 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 TAOK3Q9H2K8 898 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 IL1RAPL2Q9NP60 686 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 TTF2Q9UNY4 1162 aaKnown RBP12□□□□□ -0.49
NIF3L1-204ENST00000409357 COL4A5P29400 1685 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 F6X3S4 739 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 H0YHG0 523 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 GTPBP6O43824 516 aaPredicted RBP12□□□□□ -0.49
NIF3L1-204ENST00000409357 RASSF9O75901 435 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 CCT5P48643 541 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 USP14P54578 494 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 SARNPP82979 210 aaKnown RBP12□□□□□ -0.49
NIF3L1-204ENST00000409357 PPP2R5AQ15172 486 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 CFAP100Q494V2 611 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 FBXW10Q5XX13 1052 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 FBXL16Q8N461 479 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 C3orf20Q8ND61 904 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 CCDC148Q8NFR7 591 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 CLIC6Q96NY7 704 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 JPH2Q9BR39 696 aaPredicted RBP12□□□□□ -0.49
NIF3L1-204ENST00000409357 ISCA1Q9BUE6 129 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 TRIM6Q9C030 488 aaPredicted RBP12□□□□□ -0.49
NIF3L1-204ENST00000409357 TRMT112Q9UI30 125 aaKnown RBP12□□□□□ -0.49
NIF3L1-204ENST00000409357 ADGRG1Q9Y653 693 aa12□□□□□ -0.49
NIF3L1-204ENST00000409357 KIAA0754O94854 1291 aa11.99□□□□□ -0.49
NIF3L1-204ENST00000409357 MAP4K4O95819 1239 aaPredicted RBP11.99□□□□□ -0.49
NIF3L1-204ENST00000409357 LMOD1P29536 600 aaPredicted RBP11.99□□□□□ -0.49
NIF3L1-204ENST00000409357 HOXA10P31260 410 aaPredicted RBP11.99□□□□□ -0.49
NIF3L1-204ENST00000409357 ADCY2Q08462 1091 aa11.99□□□□□ -0.49
NIF3L1-204ENST00000409357 STIM1Q13586 685 aa11.99□□□□□ -0.49
NIF3L1-204ENST00000409357 RCSD1Q6JBY9 416 aa11.99□□□□□ -0.49
NIF3L1-204ENST00000409357 CLASRPQ8N2M8 674 aaKnown RBP11.99□□□□□ -0.49
NIF3L1-204ENST00000409357 C1orf131Q8NDD1 294 aaKnown RBP11.99□□□□□ -0.49
NIF3L1-204ENST00000409357 RPGRQ92834 1020 aaKnown RBP11.99□□□□□ -0.49
NIF3L1-204ENST00000409357 FAM89AQ96GI7 184 aa11.99□□□□□ -0.49
NIF3L1-204ENST00000409357 CAPS2Q9BXY5 557 aa11.99□□□□□ -0.49
NIF3L1-204ENST00000409357 NBPF3Q9H094 633 aa11.99□□□□□ -0.49
NIF3L1-204ENST00000409357 ODF2LQ9ULJ1 636 aa11.99□□□□□ -0.49
NIF3L1-204ENST00000409357 LTBP3Q9NS15 1303 aa11.98□□□□□ -0.49
NIF3L1-204ENST00000409357 JAK2O60674 1132 aa11.98□□□□□ -0.49
NIF3L1-204ENST00000409357 ZNF202O95125 648 aa11.98□□□□□ -0.49
NIF3L1-204ENST00000409357 NDUFA8P51970 172 aa11.98□□□□□ -0.49
NIF3L1-204ENST00000409357 AMPD2Q01433 879 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms