RNA–Protein interactions for RNA: ENST00000409204.4

PCDH20-201, Transcript of protocadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH20, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20-201ENST00000409204 SEMA3EO15041 775 aa13.57□□□□□ -0.24
PCDH20-201ENST00000409204 CETN3O15182 167 aa13.57□□□□□ -0.24
PCDH20-201ENST00000409204 CCNT1O60563 726 aaKnown RBP13.57□□□□□ -0.24
PCDH20-201ENST00000409204 ARID4AP29374 1257 aaPredicted RBP13.57□□□□□ -0.24
PCDH20-201ENST00000409204 TBC1D8BQ0IIM8 1120 aa13.57□□□□□ -0.24
PCDH20-201ENST00000409204 SPECC1LQ69YQ0 1117 aa13.57□□□□□ -0.24
PCDH20-201ENST00000409204 DPH6Q7L8W6 267 aa13.57□□□□□ -0.24
PCDH20-201ENST00000409204 ATG9AQ7Z3C6 839 aa13.57□□□□□ -0.24
PCDH20-201ENST00000409204 LCORLQ8N3X6 602 aa13.57□□□□□ -0.24
PCDH20-201ENST00000409204 ARFGAP3Q9NP61 516 aa13.57□□□□□ -0.24
PCDH20-201ENST00000409204 SPATA31A5Q5VU36 1347 aa13.57□□□□□ -0.24
PCDH20-201ENST00000409204 SPATA31A7Q8IWB4 1347 aa13.57□□□□□ -0.24
PCDH20-201ENST00000409204 CHMP2AO43633 222 aa13.57□□□□□ -0.24
PCDH20-201ENST00000409204 ECM2O94769 699 aaPredicted RBP13.57□□□□□ -0.24
PCDH20-201ENST00000409204 SCRN1Q12765 414 aa13.57□□□□□ -0.24
PCDH20-201ENST00000409204 GPHNQ9NQX3 736 aaPredicted RBP13.57□□□□□ -0.24
PCDH20-201ENST00000409204 NOD1Q9Y239 953 aa13.57□□□□□ -0.24
PCDH20-201ENST00000409204 ZKSCAN5Q9Y2L8 839 aa13.57□□□□□ -0.24
PCDH20-201ENST00000409204 NOP56O00567 594 aaKnown RBP13.56□□□□□ -0.24
PCDH20-201ENST00000409204 WDR44Q5JSH3 913 aa13.56□□□□□ -0.24
PCDH20-201ENST00000409204 PPP1R14CQ8TAE6 165 aa13.56□□□□□ -0.24
PCDH20-201ENST00000409204 CNKSR1Q969H4 720 aa13.56□□□□□ -0.24
PCDH20-201ENST00000409204 EXOC7Q9UPT5 735 aa13.56□□□□□ -0.24
PCDH20-201ENST00000409204 CCDC169A6NNP5 214 aa13.56□□□□□ -0.24
PCDH20-201ENST00000409204 GJC1P36383 396 aa13.56□□□□□ -0.24
PCDH20-201ENST00000409204 BTDP43251 543 aa13.56□□□□□ -0.24
PCDH20-201ENST00000409204 GRAPQ13588 217 aa13.56□□□□□ -0.24
PCDH20-201ENST00000409204 CUL4AQ13619 759 aa13.56□□□□□ -0.24
PCDH20-201ENST00000409204 GRAPLQ8TC17 118 aaPredicted RBP13.56□□□□□ -0.24
PCDH20-201ENST00000409204 CHURC1Q8WUH1 139 aa13.56□□□□□ -0.24
PCDH20-201ENST00000409204 ATP6V0A2Q9Y487 856 aa13.56□□□□□ -0.24
PCDH20-201ENST00000409204 PPEF1O14829 653 aaPredicted RBP13.56□□□□□ -0.24
PCDH20-201ENST00000409204 CYP2E1P05181 493 aaPredicted RBP13.56□□□□□ -0.24
PCDH20-201ENST00000409204 VWA3BQ502W6 1294 aa13.56□□□□□ -0.24
PCDH20-201ENST00000409204 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.56□□□□□ -0.24
PCDH20-201ENST00000409204 FAM107BQ9H098 131 aa13.56□□□□□ -0.24
PCDH20-201ENST00000409204 MINPP1Q9UNW1 487 aa13.56□□□□□ -0.24
PCDH20-201ENST00000409204 MMP10P09238 476 aa13.56□□□□□ -0.24
PCDH20-201ENST00000409204 MYCLP12524 364 aaPredicted RBP13.56□□□□□ -0.24
PCDH20-201ENST00000409204 ITPK1Q13572 414 aa13.56□□□□□ -0.24
PCDH20-201ENST00000409204 RAPGEF1Q13905 1077 aa13.56□□□□□ -0.24
PCDH20-201ENST00000409204 SNX29Q8TEQ0 813 aa13.56□□□□□ -0.24
PCDH20-201ENST00000409204 SREK1Q8WXA9 508 aaKnown RBP13.56□□□□□ -0.24
PCDH20-201ENST00000409204 GPR101Q96P66 508 aaPredicted RBP13.56□□□□□ -0.24
PCDH20-201ENST00000409204 PXDNQ92626 1479 aa13.56□□□□□ -0.24
PCDH20-201ENST00000409204 ZSCAN10Q96SZ4 725 aaPredicted RBP13.55□□□□□ -0.24
PCDH20-201ENST00000409204 NOC4LQ9BVI4 516 aaKnown RBP13.55□□□□□ -0.24
PCDH20-201ENST00000409204 IQCGQ9H095 443 aaKnown RBP13.55□□□□□ -0.24
PCDH20-201ENST00000409204 LARGE1O95461 756 aa13.55□□□□□ -0.24
PCDH20-201ENST00000409204 REXO1Q8N1G1 1221 aaKnown RBP13.55□□□□□ -0.24
PCDH20-201ENST00000409204 FANCBQ8NB91 859 aa13.55□□□□□ -0.24
PCDH20-201ENST00000409204 VPS54Q9P1Q0 977 aa13.55□□□□□ -0.24
PCDH20-201ENST00000409204 GUCA1BQ9UMX6 200 aa13.55□□□□□ -0.24
PCDH20-201ENST00000409204 DYNC1I1O14576 645 aa13.55□□□□□ -0.24
PCDH20-201ENST00000409204 TAF12Q16514 161 aa13.55□□□□□ -0.24
PCDH20-201ENST00000409204 GRIPAP1Q4V328 841 aa13.55□□□□□ -0.24
PCDH20-201ENST00000409204 BARGINQ6ZT62 677 aa13.55□□□□□ -0.24
PCDH20-201ENST00000409204 MLKLQ8NB16 471 aa13.55□□□□□ -0.24
PCDH20-201ENST00000409204 C3P01024 1663 aa13.55□□□□□ -0.24
PCDH20-201ENST00000409204 HARSP12081 509 aaKnown RBP13.55□□□□□ -0.24
PCDH20-201ENST00000409204 SPATA31A6Q5VVP1 1343 aa13.54□□□□□ -0.24
PCDH20-201ENST00000409204 CFBP00751 764 aa13.54□□□□□ -0.24
PCDH20-201ENST00000409204 IRX3P78415 501 aaPredicted RBP13.54□□□□□ -0.24
PCDH20-201ENST00000409204 CBX1P83916 185 aa13.54□□□□□ -0.24
PCDH20-201ENST00000409204 SCARF1Q14162 830 aa13.54□□□□□ -0.24
PCDH20-201ENST00000409204 A0A1W2PRG0 241 aa13.54□□□□□ -0.24
PCDH20-201ENST00000409204 POLR2DO15514 142 aaKnown RBP13.54□□□□□ -0.24
PCDH20-201ENST00000409204 SLU7O95391 586 aaKnown RBP13.54□□□□□ -0.24
PCDH20-201ENST00000409204 NCAPH2Q6IBW4 605 aa13.54□□□□□ -0.24
PCDH20-201ENST00000409204 GSTA5Q7RTV2 222 aa13.54□□□□□ -0.24
PCDH20-201ENST00000409204 ATP8A2Q9NTI2 1148 aa13.54□□□□□ -0.24
PCDH20-201ENST00000409204 DNM3Q9UQ16 869 aa13.54□□□□□ -0.24
PCDH20-201ENST00000409204 RIPOR2Q9Y4F9 1068 aa13.54□□□□□ -0.24
PCDH20-201ENST00000409204 AKR1B15C9JRZ8 316 aaPredicted RBP13.54□□□□□ -0.24
PCDH20-201ENST00000409204 STX10O60499 249 aa13.54□□□□□ -0.24
PCDH20-201ENST00000409204 STRN3Q13033 797 aa13.54□□□□□ -0.24
PCDH20-201ENST00000409204 TRIM14Q14142 442 aa13.54□□□□□ -0.24
PCDH20-201ENST00000409204 HS1BP3Q53T59 392 aa13.54□□□□□ -0.24
PCDH20-201ENST00000409204 CCDC50Q8IVM0 306 aa13.54□□□□□ -0.24
PCDH20-201ENST00000409204 KIFAP3Q92845 792 aa13.54□□□□□ -0.24
PCDH20-201ENST00000409204 TMEM110-MUSTN1A8MSY1 372 aa13.54□□□□□ -0.24
PCDH20-201ENST00000409204 DIXDC1Q155Q3 683 aa13.54□□□□□ -0.24
PCDH20-201ENST00000409204 HERC4Q5GLZ8 1057 aaPredicted RBP13.54□□□□□ -0.24
PCDH20-201ENST00000409204 RNF187Q5TA31 235 aaPredicted RBP13.54□□□□□ -0.24
PCDH20-201ENST00000409204 ZNF34Q8IZ26 560 aa13.54□□□□□ -0.24
PCDH20-201ENST00000409204 CSGALNACT2Q8N6G5 542 aa13.54□□□□□ -0.24
PCDH20-201ENST00000409204 AZI2Q9H6S1 392 aa13.54□□□□□ -0.24
PCDH20-201ENST00000409204 MED23Q9ULK4 1368 aa13.53□□□□□ -0.24
PCDH20-201ENST00000409204 FERP16591 822 aa13.53□□□□□ -0.24
PCDH20-201ENST00000409204 SLC8A3P57103 927 aa13.53□□□□□ -0.24
PCDH20-201ENST00000409204 MCTP2Q6DN12 878 aa13.53□□□□□ -0.24
PCDH20-201ENST00000409204 TMEM63CQ9P1W3 806 aa13.53□□□□□ -0.24
PCDH20-201ENST00000409204 KCNG1Q9UIX4 513 aa13.53□□□□□ -0.24
PCDH20-201ENST00000409204 BCS1LQ9Y276 419 aa13.53□□□□□ -0.24
PCDH20-201ENST00000409204 CALUO43852 315 aaPredicted RBP13.53□□□□□ -0.24
PCDH20-201ENST00000409204 CAMTA2O94983 1202 aa13.53□□□□□ -0.24
PCDH20-201ENST00000409204 TUBBP07437 444 aa13.53□□□□□ -0.24
PCDH20-201ENST00000409204 PRKG1Q13976 671 aa13.53□□□□□ -0.24
PCDH20-201ENST00000409204 MYSM1Q5VVJ2 828 aa13.53□□□□□ -0.24
PCDH20-201ENST00000409204 STRBPQ96SI9 672 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms