RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 TANGO6Q9C0B7 1094 aa21.3■■□□□ 1
PDLIM2-206ENST00000409141 NYAP2Q9P242 653 aa21.3■■□□□ 1
PDLIM2-206ENST00000409141 RBPJLQ9UBG7 517 aa21.3■■□□□ 1
PDLIM2-206ENST00000409141 MORF4L1Q9UBU8 362 aa21.3■■□□□ 1
PDLIM2-206ENST00000409141 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.3■■□□□ 1
PDLIM2-206ENST00000409141 PTCH2Q9Y6C5 1203 aa21.3■■□□□ 1
PDLIM2-206ENST00000409141 ZMYM6O95789 1325 aa21.29■■□□□ 1
PDLIM2-206ENST00000409141 TNPO2O14787 897 aaKnown RBP21.29■■□□□ 1
PDLIM2-206ENST00000409141 RAD21O60216 631 aa21.29■■□□□ 1
PDLIM2-206ENST00000409141 NEDD1Q8NHV4 660 aa21.29■■□□□ 1
PDLIM2-206ENST00000409141 PAGR1Q9BTK6 254 aa21.29■■□□□ 1
PDLIM2-206ENST00000409141 GOPCQ9HD26 462 aa21.29■■□□□ 1
PDLIM2-206ENST00000409141 TXNRD2Q9NNW7 524 aa21.29■■□□□ 1
PDLIM2-206ENST00000409141 CLIP2Q9UDT6 1046 aa21.29■■□□□ 1
PDLIM2-206ENST00000409141 IGKV6D-41A0A0C4DH26 115 aa21.28■■□□□ 1
PDLIM2-206ENST00000409141 PEX10O60683 326 aa21.28■■□□□ 1
PDLIM2-206ENST00000409141 HAND2P61296 217 aa21.28■■□□□ 1
PDLIM2-206ENST00000409141 COG2Q14746 738 aa21.28■■□□□ 1
PDLIM2-206ENST00000409141 RUFY2Q8WXA3 655 aa21.28■■□□□ 1
PDLIM2-206ENST00000409141 CEP95Q96GE4 821 aa21.28■■□□□ 1
PDLIM2-206ENST00000409141 TOMM22Q9NS69 142 aa21.28■■□□□ 1
PDLIM2-206ENST00000409141 MTMR4Q9NYA4 1195 aa21.28■■□□□ 1
PDLIM2-206ENST00000409141 HOXC10Q9NYD6 342 aa21.28■■□□□ 1
PDLIM2-206ENST00000409141 ZSWIM8A7E2V4 1837 aa21.28■■□□□ 1
PDLIM2-206ENST00000409141 MYPNQ86TC9 1320 aa21.28■■□□□ 1
PDLIM2-206ENST00000409141 TSPY2A6NKD2 308 aa21.27■■□□□ 1
PDLIM2-206ENST00000409141 RANBP6O60518 1105 aaKnown RBP21.27■■□□□ 1
PDLIM2-206ENST00000409141 CHMLP26374 656 aa21.27■■□□□ 1
PDLIM2-206ENST00000409141 COA7Q96BR5 231 aa21.27■■□□□ 1
PDLIM2-206ENST00000409141 TACC3Q9Y6A5 838 aa21.27■■□□□ 1
PDLIM2-206ENST00000409141 WDR46O15213 610 aaKnown RBP21.26■□□□□ 0.99
PDLIM2-206ENST00000409141 ORC4O43929 436 aa21.26■□□□□ 0.99
PDLIM2-206ENST00000409141 Q3C1V9 767 aa21.26■□□□□ 0.99
PDLIM2-206ENST00000409141 POTEEQ6S8J3 1075 aa21.26■□□□□ 0.99
PDLIM2-206ENST00000409141 SKAP1Q86WV1 359 aa21.26■□□□□ 0.99
PDLIM2-206ENST00000409141 RAET1EQ8TD07 263 aa21.26■□□□□ 0.99
PDLIM2-206ENST00000409141 DSCC1Q9BVC3 393 aa21.26■□□□□ 0.99
PDLIM2-206ENST00000409141 RABGAP1Q9Y3P9 1069 aa21.26■□□□□ 0.99
PDLIM2-206ENST00000409141 ZNF213O14771 459 aa21.26■□□□□ 0.99
PDLIM2-206ENST00000409141 TTLL1O95922 423 aa21.26■□□□□ 0.99
PDLIM2-206ENST00000409141 FGRP09769 529 aa21.26■□□□□ 0.99
PDLIM2-206ENST00000409141 ERVK-9P63128 1117 aa21.26■□□□□ 0.99
PDLIM2-206ENST00000409141 ERVK-24P63145 666 aa21.26■□□□□ 0.99
PDLIM2-206ENST00000409141 PRKCZQ05513 592 aa21.26■□□□□ 0.99
PDLIM2-206ENST00000409141 SLC9C1Q4G0N8 1177 aa21.26■□□□□ 0.99
PDLIM2-206ENST00000409141 RRP12Q5JTH9 1297 aaKnown RBP21.26■□□□□ 0.99
PDLIM2-206ENST00000409141 CCAR1Q8IX12 1150 aaKnown RBP21.26■□□□□ 0.99
PDLIM2-206ENST00000409141 MKL1Q969V6 931 aa21.26■□□□□ 0.99
PDLIM2-206ENST00000409141 IL25Q9H293 177 aa21.26■□□□□ 0.99
PDLIM2-206ENST00000409141 GABRQQ9UN88 632 aa21.26■□□□□ 0.99
PDLIM2-206ENST00000409141 PLIN4Q96Q06 1357 aa21.25■□□□□ 0.99
PDLIM2-206ENST00000409141 SPDYE16A6NNV3 312 aaPredicted RBP21.25■□□□□ 0.99
PDLIM2-206ENST00000409141 FLOT1O75955 427 aa21.25■□□□□ 0.99
PDLIM2-206ENST00000409141 LBX2Q6XYB7 198 aa21.25■□□□□ 0.99
PDLIM2-206ENST00000409141 MFSD6Q6ZSS7 791 aa21.25■□□□□ 0.99
PDLIM2-206ENST00000409141 NBPF11Q86T75 865 aa21.25■□□□□ 0.99
PDLIM2-206ENST00000409141 CTNNA3Q9UI47 895 aa21.25■□□□□ 0.99
PDLIM2-206ENST00000409141 RAD50Q92878 1312 aa21.24■□□□□ 0.99
PDLIM2-206ENST00000409141 GREB1LQ9C091 1923 aaPredicted RBP21.24■□□□□ 0.99
PDLIM2-206ENST00000409141 F5H6K3 240 aa21.24■□□□□ 0.99
PDLIM2-206ENST00000409141 CNMDO75829 334 aa21.24■□□□□ 0.99
PDLIM2-206ENST00000409141 FLT3LGP49771 235 aa21.24■□□□□ 0.99
PDLIM2-206ENST00000409141 KLRC3Q07444 240 aa21.24■□□□□ 0.99
PDLIM2-206ENST00000409141 PPP4R3BQ5MIZ7 849 aa21.24■□□□□ 0.99
PDLIM2-206ENST00000409141 AKNAD1Q5T1N1 836 aa21.24■□□□□ 0.99
PDLIM2-206ENST00000409141 SAMD1Q6SPF0 538 aaPredicted RBP21.24■□□□□ 0.99
PDLIM2-206ENST00000409141 DSG3P32926 999 aa21.23■□□□□ 0.99
PDLIM2-206ENST00000409141 FAM83BQ5T0W9 1011 aa21.23■□□□□ 0.99
PDLIM2-206ENST00000409141 ARMC5Q96C12 935 aa21.23■□□□□ 0.99
PDLIM2-206ENST00000409141 RNF41Q9H4P4 317 aaPredicted RBP21.23■□□□□ 0.99
PDLIM2-206ENST00000409141 BTBD7Q9P203 1132 aa21.23■□□□□ 0.99
PDLIM2-206ENST00000409141 NDUFB10O96000 172 aa21.22■□□□□ 0.99
PDLIM2-206ENST00000409141 PCP11498 1178 aaKnown RBP21.22■□□□□ 0.99
PDLIM2-206ENST00000409141 MAPK4P31152 587 aa21.22■□□□□ 0.99
PDLIM2-206ENST00000409141 SOX10P56693 466 aa21.22■□□□□ 0.99
PDLIM2-206ENST00000409141 CCNA1P78396 465 aa21.22■□□□□ 0.99
PDLIM2-206ENST00000409141 IMMTQ16891 758 aaKnown RBP21.22■□□□□ 0.99
PDLIM2-206ENST00000409141 TBC1D10CQ8IV04 446 aa21.22■□□□□ 0.99
PDLIM2-206ENST00000409141 LRRC47Q8N1G4 583 aaKnown RBP21.22■□□□□ 0.99
PDLIM2-206ENST00000409141 SH3TC2Q8TF17 1288 aa21.22■□□□□ 0.99
PDLIM2-206ENST00000409141 STAG1Q8WVM7 1258 aa21.22■□□□□ 0.99
PDLIM2-206ENST00000409141 NUP88Q99567 741 aaPredicted RBP21.22■□□□□ 0.99
PDLIM2-206ENST00000409141 NBPF3Q9H094 633 aa21.22■□□□□ 0.99
PDLIM2-206ENST00000409141 IL17RBQ9NRM6 502 aa21.22■□□□□ 0.99
PDLIM2-206ENST00000409141 SYNPO2Q9UMS6 1093 aa21.22■□□□□ 0.99
PDLIM2-206ENST00000409141 STX8Q9UNK0 236 aa21.22■□□□□ 0.99
PDLIM2-206ENST00000409141 MGAMO43451 1857 aa21.22■□□□□ 0.99
PDLIM2-206ENST00000409141 NMT2O60551 498 aa21.21■□□□□ 0.99
PDLIM2-206ENST00000409141 GRK4P32298 578 aa21.21■□□□□ 0.99
PDLIM2-206ENST00000409141 ATG4CQ96DT6 458 aa21.21■□□□□ 0.99
PDLIM2-206ENST00000409141 PORCNQ9H237 461 aa21.21■□□□□ 0.99
PDLIM2-206ENST00000409141 CWC22Q9HCG8 908 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-206ENST00000409141 ADCY3O60266 1144 aa21.2■□□□□ 0.98
PDLIM2-206ENST00000409141 MB21D1Q8N884 522 aa21.2■□□□□ 0.98
PDLIM2-206ENST00000409141 GMCL1P1Q8NEA9 526 aa21.2■□□□□ 0.98
PDLIM2-206ENST00000409141 ZNF333Q96JL9 665 aa21.2■□□□□ 0.98
PDLIM2-206ENST00000409141 FBXO28Q9NVF7 368 aa21.2■□□□□ 0.98
PDLIM2-206ENST00000409141 BIN2Q9UBW5 565 aaPredicted RBP21.2■□□□□ 0.98
PDLIM2-206ENST00000409141 SGSM2O43147 1006 aa21.2■□□□□ 0.98
PDLIM2-206ENST00000409141 IRF5Q13568 498 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms