RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 USP17L17D6RBQ6 530 aa11.14□□□□□ -0.63
NIF3L1-203ENST00000409129 USP17L19D6RCP7 530 aa11.14□□□□□ -0.63
NIF3L1-203ENST00000409129 USP17L20D6RJB6 530 aa11.14□□□□□ -0.63
NIF3L1-203ENST00000409129 COL6A1P12109 1028 aa11.14□□□□□ -0.63
NIF3L1-203ENST00000409129 USP17L24Q0WX57 530 aa11.14□□□□□ -0.63
NIF3L1-203ENST00000409129 PDE3AQ14432 1141 aa11.14□□□□□ -0.63
NIF3L1-203ENST00000409129 CERKLQ49MI3 558 aaPredicted RBP11.14□□□□□ -0.63
NIF3L1-203ENST00000409129 HSP90AB4PQ58FF6 505 aa11.14□□□□□ -0.63
NIF3L1-203ENST00000409129 C9orf50Q5SZB4 431 aa11.14□□□□□ -0.63
NIF3L1-203ENST00000409129 MAP3K21Q5TCX8 1036 aa11.14□□□□□ -0.63
NIF3L1-203ENST00000409129 POTEEQ6S8J3 1075 aa11.14□□□□□ -0.63
NIF3L1-203ENST00000409129 PANK1Q8TE04 598 aa11.14□□□□□ -0.63
NIF3L1-203ENST00000409129 USP6NLQ92738 828 aa11.14□□□□□ -0.63
NIF3L1-203ENST00000409129 SYMPKQ92797 1274 aaKnown RBP11.14□□□□□ -0.63
NIF3L1-203ENST00000409129 C12orf42Q96LP6 360 aa11.14□□□□□ -0.63
NIF3L1-203ENST00000409129 PAGR1Q9BTK6 254 aa11.14□□□□□ -0.63
NIF3L1-203ENST00000409129 PORCNQ9H237 461 aa11.14□□□□□ -0.63
NIF3L1-203ENST00000409129 PLXNA1Q9UIW2 1896 aa11.14□□□□□ -0.63
NIF3L1-203ENST00000409129 GBF1Q92538 1859 aa11.13□□□□□ -0.63
NIF3L1-203ENST00000409129 MAGEB6P1A0A0J9YX57 407 aa11.13□□□□□ -0.63
NIF3L1-203ENST00000409129 RGS2P41220 211 aa11.13□□□□□ -0.63
NIF3L1-203ENST00000409129 PLCD1P51178 756 aa11.13□□□□□ -0.63
NIF3L1-203ENST00000409129 USP14P54578 494 aa11.13□□□□□ -0.63
NIF3L1-203ENST00000409129 PLCB2Q00722 1185 aa11.13□□□□□ -0.63
NIF3L1-203ENST00000409129 RAB3GAP1Q15042 981 aa11.13□□□□□ -0.63
NIF3L1-203ENST00000409129 TTF1Q15361 905 aaPredicted RBP11.13□□□□□ -0.63
NIF3L1-203ENST00000409129 SHHQ15465 462 aa11.13□□□□□ -0.63
NIF3L1-203ENST00000409129 ZYXQ15942 572 aaKnown RBP11.13□□□□□ -0.63
NIF3L1-203ENST00000409129 ABCB5Q2M3G0 1257 aa11.13□□□□□ -0.63
NIF3L1-203ENST00000409129 MORN1Q5T089 497 aa11.13□□□□□ -0.63
NIF3L1-203ENST00000409129 CATSPERGQ6ZRH7 1159 aa11.13□□□□□ -0.63
NIF3L1-203ENST00000409129 GPR142Q7Z601 462 aa11.13□□□□□ -0.63
NIF3L1-203ENST00000409129 PLEKHH3Q7Z736 793 aa11.13□□□□□ -0.63
NIF3L1-203ENST00000409129 RHPN1Q8TCX5 695 aa11.13□□□□□ -0.63
NIF3L1-203ENST00000409129 FEZ1Q99689 392 aa11.13□□□□□ -0.63
NIF3L1-203ENST00000409129 RIOK1Q9BRS2 568 aaKnown RBP11.13□□□□□ -0.63
NIF3L1-203ENST00000409129 KIAA1683Q9H0B3 1180 aa11.13□□□□□ -0.63
NIF3L1-203ENST00000409129 IL1RAPL2Q9NP60 686 aa11.13□□□□□ -0.63
NIF3L1-203ENST00000409129 CABP5Q9NP86 173 aa11.13□□□□□ -0.63
NIF3L1-203ENST00000409129 RABGAP1Q9Y3P9 1069 aa11.13□□□□□ -0.63
NIF3L1-203ENST00000409129 CNMDO75829 334 aa11.12□□□□□ -0.63
NIF3L1-203ENST00000409129 POLR3DP05423 398 aaPredicted RBP11.12□□□□□ -0.63
NIF3L1-203ENST00000409129 MS4A1P11836 297 aa11.12□□□□□ -0.63
NIF3L1-203ENST00000409129 ZKSCAN1P17029 563 aaPredicted RBP11.12□□□□□ -0.63
NIF3L1-203ENST00000409129 SHMT1P34896 483 aa11.12□□□□□ -0.63
NIF3L1-203ENST00000409129 CACNB2Q08289 660 aaPredicted RBP11.12□□□□□ -0.63
NIF3L1-203ENST00000409129 TJAP1Q5JTD0 557 aa11.12□□□□□ -0.63
NIF3L1-203ENST00000409129 SLC9C2Q5TAH2 1124 aa11.12□□□□□ -0.63
NIF3L1-203ENST00000409129 ACER1Q8TDN7 264 aa11.12□□□□□ -0.63
NIF3L1-203ENST00000409129 BBXQ8WY36 941 aaPredicted RBP11.12□□□□□ -0.63
NIF3L1-203ENST00000409129 CWC22Q9HCG8 908 aaKnown RBP11.12□□□□□ -0.63
NIF3L1-203ENST00000409129 GLRX3O76003 335 aaKnown RBP11.11□□□□□ -0.63
NIF3L1-203ENST00000409129 PDE6AP16499 860 aa11.11□□□□□ -0.63
NIF3L1-203ENST00000409129 CCND3P30281 292 aaPredicted RBP11.11□□□□□ -0.63
NIF3L1-203ENST00000409129 GUCY1A2P33402 732 aa11.11□□□□□ -0.63
NIF3L1-203ENST00000409129 CCNA1P78396 465 aa11.11□□□□□ -0.63
NIF3L1-203ENST00000409129 CCL14Q16627 93 aa11.11□□□□□ -0.63
NIF3L1-203ENST00000409129 RPAP2Q8IXW5 612 aaPredicted RBP11.11□□□□□ -0.63
NIF3L1-203ENST00000409129 CLASRPQ8N2M8 674 aaKnown RBP11.11□□□□□ -0.63
NIF3L1-203ENST00000409129 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.11□□□□□ -0.63
NIF3L1-203ENST00000409129 KIF1BPQ96EK5 621 aa11.11□□□□□ -0.63
NIF3L1-203ENST00000409129 EDC3Q96F86 508 aaKnown RBP11.11□□□□□ -0.63
NIF3L1-203ENST00000409129 APBA2Q99767 749 aa11.11□□□□□ -0.63
NIF3L1-203ENST00000409129 LBHD1Q9BQE6 289 aaPredicted RBP11.11□□□□□ -0.63
NIF3L1-203ENST00000409129 CRNKL1Q9BZJ0 848 aaKnown RBP11.11□□□□□ -0.63
NIF3L1-203ENST00000409129 MYH1P12882 1939 aa11.11□□□□□ -0.63
NIF3L1-203ENST00000409129 ZBED9Q6R2W3 1325 aa11.1□□□□□ -0.63
NIF3L1-203ENST00000409129 IFIT2P09913 472 aaKnown RBP11.1□□□□□ -0.63
NIF3L1-203ENST00000409129 VCAM1P19320 739 aa11.1□□□□□ -0.63
NIF3L1-203ENST00000409129 PTPREP23469 700 aa11.1□□□□□ -0.63
NIF3L1-203ENST00000409129 ATN1P54259 1190 aaPredicted RBP11.1□□□□□ -0.63
NIF3L1-203ENST00000409129 GABPAQ06546 454 aa11.1□□□□□ -0.63
NIF3L1-203ENST00000409129 MAP2K5Q13163 448 aa11.1□□□□□ -0.63
NIF3L1-203ENST00000409129 LBX2Q6XYB7 198 aa11.1□□□□□ -0.63
NIF3L1-203ENST00000409129 MCM9Q9NXL9 1143 aa11.1□□□□□ -0.63
NIF3L1-203ENST00000409129 ZNF532Q9HCE3 1301 aa11.09□□□□□ -0.63
NIF3L1-203ENST00000409129 TCRBV5S4A2TA0A5A2 114 aa11.09□□□□□ -0.63
NIF3L1-203ENST00000409129 SLC15A5A6NIM6 579 aa11.09□□□□□ -0.63
NIF3L1-203ENST00000409129 APBB1O00213 710 aa11.09□□□□□ -0.63
NIF3L1-203ENST00000409129 GOLIM4O00461 696 aa11.09□□□□□ -0.63
NIF3L1-203ENST00000409129 HMMRO75330 724 aa11.09□□□□□ -0.63
NIF3L1-203ENST00000409129 SEPT2Q15019 361 aa11.09□□□□□ -0.63
NIF3L1-203ENST00000409129 WDR78Q5VTH9 848 aa11.09□□□□□ -0.63
NIF3L1-203ENST00000409129 DIEXFQ68CQ4 756 aaKnown RBP11.09□□□□□ -0.63
NIF3L1-203ENST00000409129 SIRT2Q8IXJ6 389 aa11.09□□□□□ -0.63
NIF3L1-203ENST00000409129 HS6ST3Q8IZP7 471 aa11.09□□□□□ -0.63
NIF3L1-203ENST00000409129 DNAJC2Q99543 621 aaKnown RBP11.09□□□□□ -0.63
NIF3L1-203ENST00000409129 RPAP3Q9H6T3 665 aaPredicted RBP11.09□□□□□ -0.63
NIF3L1-203ENST00000409129 DCP1AQ9NPI6 582 aaPredicted RBP11.09□□□□□ -0.63
NIF3L1-203ENST00000409129 BTBD7Q9P203 1132 aa11.09□□□□□ -0.63
NIF3L1-203ENST00000409129 A0A1W2PRG0 241 aa11.08□□□□□ -0.64
NIF3L1-203ENST00000409129 SPDYE16A6NNV3 312 aaPredicted RBP11.08□□□□□ -0.64
NIF3L1-203ENST00000409129 MPHOSPH10O00566 681 aaKnown RBP11.08□□□□□ -0.64
NIF3L1-203ENST00000409129 RAB11FIP3O75154 756 aa11.08□□□□□ -0.64
NIF3L1-203ENST00000409129 HOXC6P09630 235 aa11.08□□□□□ -0.64
NIF3L1-203ENST00000409129 CD44P16070 742 aaKnown RBP11.08□□□□□ -0.64
NIF3L1-203ENST00000409129 COG2Q14746 738 aa11.08□□□□□ -0.64
NIF3L1-203ENST00000409129 GRIN2CQ14957 1233 aa11.08□□□□□ -0.64
NIF3L1-203ENST00000409129 MFSD14CQ5VZR4 134 aa11.08□□□□□ -0.64
NIF3L1-203ENST00000409129 LCORLQ8N3X6 602 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms