RNA–Protein interactions for RNA: ENST00000409057.5

PBRM1-205, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-205ENST00000409057 ERVV-2B6SEH9 535 aa11.86□□□□□ -0.51
PBRM1-205ENST00000409057 MYCNP04198 464 aaPredicted RBP11.86□□□□□ -0.51
PBRM1-205ENST00000409057 PSMC4P43686 418 aa11.86□□□□□ -0.51
PBRM1-205ENST00000409057 UAP1Q16222 522 aaPredicted RBP11.86□□□□□ -0.51
PBRM1-205ENST00000409057 WDR44Q5JSH3 913 aa11.86□□□□□ -0.51
PBRM1-205ENST00000409057 CERS3Q8IU89 383 aa11.86□□□□□ -0.51
PBRM1-205ENST00000409057 RASEFQ8IZ41 740 aa11.86□□□□□ -0.51
PBRM1-205ENST00000409057 ARHGAP24Q8N264 748 aa11.86□□□□□ -0.51
PBRM1-205ENST00000409057 PABPN1LA6NDY0 278 aaKnown RBP11.85□□□□□ -0.51
PBRM1-205ENST00000409057 PHKG2P15735 406 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 SPATA1Q5VX52 437 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 CABP7Q86V35 215 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 PPP1R13BQ96KQ4 1090 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 CDC23Q9UJX2 597 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 KRT5P13647 590 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 ARID4AP29374 1257 aaPredicted RBP11.85□□□□□ -0.51
PBRM1-205ENST00000409057 CTNNA1P35221 906 aaKnown RBP11.85□□□□□ -0.51
PBRM1-205ENST00000409057 NDUFA8P51970 172 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 CCDC38Q502W7 563 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 DENND2CQ68D51 928 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 RBM17Q96I25 401 aaKnown RBP11.85□□□□□ -0.51
PBRM1-205ENST00000409057 LZTS2Q9BRK4 669 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 LSG1Q9H089 658 aaKnown RBP11.85□□□□□ -0.51
PBRM1-205ENST00000409057 COPRSQ9NQ92 184 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 PARP3Q9Y6F1 533 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 CEP170Q5SW79 1584 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 DYMQ7RTS9 669 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 SRGAP1Q7Z6B7 1085 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 CCNL1Q9UK58 526 aaPredicted RBP11.85□□□□□ -0.51
PBRM1-205ENST00000409057 SSX2IPQ9Y2D8 614 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 STK24Q9Y6E0 443 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 H7C1D1 291 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 ADD1P35611 737 aaKnown RBP11.85□□□□□ -0.51
PBRM1-205ENST00000409057 MORC3Q14149 939 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 HHATQ5VTY9 493 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 TTLL7Q6ZT98 887 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 UNC5CLQ8IV45 518 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 CACTINQ8WUQ7 758 aaKnown RBP11.85□□□□□ -0.51
PBRM1-205ENST00000409057 ARHGEF2Q92974 986 aaKnown RBP11.85□□□□□ -0.51
PBRM1-205ENST00000409057 MAK16Q9BXY0 300 aaKnown RBP11.85□□□□□ -0.51
PBRM1-205ENST00000409057 VCX3BQ9H321 246 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 PARP2Q9UGN5 583 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 GGA1Q9UJY5 639 aa11.85□□□□□ -0.51
PBRM1-205ENST00000409057 PPP2R5EQ16537 467 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 LIN9Q5TKA1 542 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 CCDC105Q8IYK2 499 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 FBXO18Q8NFZ0 1043 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 MAP4K1Q92918 833 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 VCXQ9H320 206 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 PDE11AQ9HCR9 933 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 NLRC4Q9NPP4 1024 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 RTEL1Q9NZ71 1219 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 ERBB4Q15303 1308 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 RNF40O75150 1001 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 PDE6AP16499 860 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 ZNF131P52739 623 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 TFAP4Q01664 338 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 BIRC3Q13489 604 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 CCDC62Q6P9F0 684 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 FNBP1Q96RU3 617 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 NDC80O14777 642 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 BACH1O14867 736 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 HGSO14964 777 aaPredicted RBP11.84□□□□□ -0.51
PBRM1-205ENST00000409057 RGS16O15492 202 aaPredicted RBP11.84□□□□□ -0.51
PBRM1-205ENST00000409057 ARL1P40616 181 aaPredicted RBP11.84□□□□□ -0.51
PBRM1-205ENST00000409057 SARNPP82979 210 aaKnown RBP11.84□□□□□ -0.51
PBRM1-205ENST00000409057 GKAP1Q5VSY0 366 aaPredicted RBP11.84□□□□□ -0.51
PBRM1-205ENST00000409057 PSMD1Q99460 953 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 EPN1Q9Y6I3 576 aaPredicted RBP11.84□□□□□ -0.51
PBRM1-205ENST00000409057 B4DLN1 442 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 GNA14O95837 355 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 GUCY2FP51841 1108 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 CTSWP56202 376 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 APBA1Q02410 837 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 PPARAQ07869 468 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 SEPT6Q14141 434 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.84□□□□□ -0.51
PBRM1-205ENST00000409057 FAM212AQ96EL1 285 aa11.84□□□□□ -0.51
PBRM1-205ENST00000409057 KDM6BO15054 1643 aa11.83□□□□□ -0.52
PBRM1-205ENST00000409057 FGAP02671 866 aa11.83□□□□□ -0.52
PBRM1-205ENST00000409057 RASSF2P50749 326 aa11.83□□□□□ -0.52
PBRM1-205ENST00000409057 ADCK5Q3MIX3 580 aa11.83□□□□□ -0.52
PBRM1-205ENST00000409057 SH2D4AQ9H788 454 aa11.83□□□□□ -0.52
PBRM1-205ENST00000409057 HOMER3Q9NSC5 361 aa11.83□□□□□ -0.52
PBRM1-205ENST00000409057 AGTPBP1Q9UPW5 1226 aa11.83□□□□□ -0.52
PBRM1-205ENST00000409057 ADCY7P51828 1080 aa11.83□□□□□ -0.52
PBRM1-205ENST00000409057 ZNF827Q17R98 1081 aa11.83□□□□□ -0.52
PBRM1-205ENST00000409057 SYNMO15061 1565 aa11.83□□□□□ -0.52
PBRM1-205ENST00000409057 USP17L12C9JPN9 530 aa11.83□□□□□ -0.52
PBRM1-205ENST00000409057 USP17L21D6R901 530 aa11.83□□□□□ -0.52
PBRM1-205ENST00000409057 IKBKBO14920 756 aa11.83□□□□□ -0.52
PBRM1-205ENST00000409057 LIG3P49916 1009 aa11.83□□□□□ -0.52
PBRM1-205ENST00000409057 SMTNP53814 917 aa11.83□□□□□ -0.52
PBRM1-205ENST00000409057 SP4Q02446 784 aa11.83□□□□□ -0.52
PBRM1-205ENST00000409057 CALCRLQ16602 461 aa11.83□□□□□ -0.52
PBRM1-205ENST00000409057 DPH6Q7L8W6 267 aa11.83□□□□□ -0.52
PBRM1-205ENST00000409057 DDX17Q92841 729 aaKnown RBP11.83□□□□□ -0.52
PBRM1-205ENST00000409057 AMFRQ9UKV5 643 aa11.83□□□□□ -0.52
PBRM1-205ENST00000409057 DNM3Q9UQ16 869 aa11.83□□□□□ -0.52
PBRM1-205ENST00000409057 GAS8O95995 478 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms