RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 FEZ1Q99689 392 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 PAGR1Q9BTK6 254 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 UNC93B1Q9H1C4 597 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 PORCNQ9H237 461 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 ATP8A2Q9NTI2 1148 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 MORF4L1Q9UBU8 362 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 SALL3Q9BXA9 1300 aa11.58□□□□□ -0.56
NIF3L1-202ENST00000409020 DOCK3Q8IZD9 2030 aa11.58□□□□□ -0.56
NIF3L1-202ENST00000409020 INHAP05111 366 aa11.58□□□□□ -0.56
NIF3L1-202ENST00000409020 UTP14CQ5TAP6 766 aaKnown RBP11.58□□□□□ -0.56
NIF3L1-202ENST00000409020 ANP32BQ92688 251 aaKnown RBP11.58□□□□□ -0.56
NIF3L1-202ENST00000409020 C12orf42Q96LP6 360 aa11.58□□□□□ -0.56
NIF3L1-202ENST00000409020 KIAA1683Q9H0B3 1180 aa11.58□□□□□ -0.56
NIF3L1-202ENST00000409020 EPB41L4AQ9HCS5 686 aaPredicted RBP11.58□□□□□ -0.56
NIF3L1-202ENST00000409020 BIN2Q9UBW5 565 aaPredicted RBP11.58□□□□□ -0.56
NIF3L1-202ENST00000409020 GJD2Q9UKL4 321 aa11.58□□□□□ -0.56
NIF3L1-202ENST00000409020 GSG1L2A8MUP6 293 aa11.57□□□□□ -0.56
NIF3L1-202ENST00000409020 RNF113AO15541 343 aaKnown RBP11.57□□□□□ -0.56
NIF3L1-202ENST00000409020 CDK8P49336 464 aa11.57□□□□□ -0.56
NIF3L1-202ENST00000409020 ZSCAN25Q6NSZ9 544 aa11.57□□□□□ -0.56
NIF3L1-202ENST00000409020 SLAIN1Q8ND83 568 aa11.57□□□□□ -0.56
NIF3L1-202ENST00000409020 GPATCH3Q96I76 525 aa11.57□□□□□ -0.56
NIF3L1-202ENST00000409020 MAP7D2Q96T17 732 aa11.57□□□□□ -0.56
NIF3L1-202ENST00000409020 CABP5Q9NP86 173 aa11.57□□□□□ -0.56
NIF3L1-202ENST00000409020 PPP4R2Q9NY27 417 aa11.57□□□□□ -0.56
NIF3L1-202ENST00000409020 PLXNB2O15031 1838 aa11.57□□□□□ -0.56
NIF3L1-202ENST00000409020 GPAA1O43292 621 aa11.56□□□□□ -0.56
NIF3L1-202ENST00000409020 ERVK-9P63128 1117 aa11.56□□□□□ -0.56
NIF3L1-202ENST00000409020 ERVK-24P63145 666 aa11.56□□□□□ -0.56
NIF3L1-202ENST00000409020 IRF5Q13568 498 aa11.56□□□□□ -0.56
NIF3L1-202ENST00000409020 TPRNQ4KMQ1 711 aa11.56□□□□□ -0.56
NIF3L1-202ENST00000409020 CATSPERGQ6ZRH7 1159 aa11.56□□□□□ -0.56
NIF3L1-202ENST00000409020 C16orf86Q6ZW13 317 aa11.56□□□□□ -0.56
NIF3L1-202ENST00000409020 GPRC5AQ8NFJ5 357 aa11.56□□□□□ -0.56
NIF3L1-202ENST00000409020 COA7Q96BR5 231 aa11.56□□□□□ -0.56
NIF3L1-202ENST00000409020 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.56□□□□□ -0.56
NIF3L1-202ENST00000409020 RNF208Q9H0X6 261 aa11.56□□□□□ -0.56
NIF3L1-202ENST00000409020 RPAP3Q9H6T3 665 aaPredicted RBP11.56□□□□□ -0.56
NIF3L1-202ENST00000409020 TTC41PQ6P2S7 1318 aa11.56□□□□□ -0.56
NIF3L1-202ENST00000409020 USP17L15C9J2P7 530 aa11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 USP17L13C9JLJ4 530 aa11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 USP17L11C9JVI0 530 aa11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 USP17L18D6R9N7 530 aa11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 USP17L22D6RA61 530 aa11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 USP17L17D6RBQ6 530 aa11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 USP17L19D6RCP7 530 aa11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 USP17L20D6RJB6 530 aa11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 MX1P20591 662 aa11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 USP17L24Q0WX57 530 aa11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 ANKRD45Q5TZF3 282 aa11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 PRPF38BQ5VTL8 546 aaKnown RBP11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 SPICE1Q8N0Z3 855 aa11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 EXOC6Q8TAG9 804 aa11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 APPBP2Q92624 585 aa11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 BTBD7Q9P203 1132 aa11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 SWAP70Q9UH65 585 aa11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 SPDYE16A6NNV3 312 aaPredicted RBP11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 CYP2B6P20813 491 aa11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 USP14P54578 494 aa11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 ICA1Q05084 483 aa11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 HDAC1Q13547 482 aaPredicted RBP11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 TMEM179Q6ZVK1 233 aa11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 PXYLP1Q8TE99 480 aa11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 TRIB2Q92519 343 aa11.55□□□□□ -0.56
NIF3L1-202ENST00000409020 MINDY4BA8MYZ0 360 aa11.54□□□□□ -0.56
NIF3L1-202ENST00000409020 FOXP2O15409 715 aa11.54□□□□□ -0.56
NIF3L1-202ENST00000409020 GJB1P08034 283 aa11.54□□□□□ -0.56
NIF3L1-202ENST00000409020 CLCN1P35523 988 aa11.54□□□□□ -0.56
NIF3L1-202ENST00000409020 GJA8P48165 433 aa11.54□□□□□ -0.56
NIF3L1-202ENST00000409020 UBXN2AP68543 259 aa11.54□□□□□ -0.56
NIF3L1-202ENST00000409020 CCDC129Q6ZRS4 1044 aa11.54□□□□□ -0.56
NIF3L1-202ENST00000409020 GPR142Q7Z601 462 aa11.54□□□□□ -0.56
NIF3L1-202ENST00000409020 U2AF1L4Q8WU68 220 aaKnown RBP11.54□□□□□ -0.56
NIF3L1-202ENST00000409020 FSD1Q9BTV5 496 aa11.54□□□□□ -0.56
NIF3L1-202ENST00000409020 PRDM1O75626 825 aa11.53□□□□□ -0.56
NIF3L1-202ENST00000409020 GLRX3O76003 335 aaKnown RBP11.53□□□□□ -0.56
NIF3L1-202ENST00000409020 IGHDP01880 384 aa11.53□□□□□ -0.56
NIF3L1-202ENST00000409020 EEF2P13639 858 aaKnown RBP11.53□□□□□ -0.56
NIF3L1-202ENST00000409020 RASA1P20936 1047 aa11.53□□□□□ -0.56
NIF3L1-202ENST00000409020 ATP2B2Q01814 1243 aa11.53□□□□□ -0.56
NIF3L1-202ENST00000409020 CCL14Q16627 93 aa11.53□□□□□ -0.56
NIF3L1-202ENST00000409020 B4GALNT3Q6L9W6 998 aa11.53□□□□□ -0.56
NIF3L1-202ENST00000409020 UBE2Q1Q7Z7E8 422 aa11.53□□□□□ -0.56
NIF3L1-202ENST00000409020 TICAM2Q86XR7 235 aa11.53□□□□□ -0.56
NIF3L1-202ENST00000409020 USP6NLQ92738 828 aa11.53□□□□□ -0.56
NIF3L1-202ENST00000409020 DEFB118Q96PH6 123 aa11.53□□□□□ -0.56
NIF3L1-202ENST00000409020 ARPP21Q9UBL0 812 aaPredicted RBP11.53□□□□□ -0.56
NIF3L1-202ENST00000409020 RLFQ13129 1914 aa11.53□□□□□ -0.56
NIF3L1-202ENST00000409020 SBK1Q52WX2 424 aa11.52□□□□□ -0.56
NIF3L1-202ENST00000409020 MORN1Q5T089 497 aa11.52□□□□□ -0.56
NIF3L1-202ENST00000409020 TANGO6Q9C0B7 1094 aa11.52□□□□□ -0.56
NIF3L1-202ENST00000409020 LNPKQ9C0E8 428 aa11.52□□□□□ -0.56
NIF3L1-202ENST00000409020 PAK6Q9NQU5 681 aaPredicted RBP11.52□□□□□ -0.56
NIF3L1-202ENST00000409020 TMX2Q9Y320 296 aa11.52□□□□□ -0.56
NIF3L1-202ENST00000409020 RABGAP1Q9Y3P9 1069 aa11.52□□□□□ -0.56
NIF3L1-202ENST00000409020 CDH23Q9H251 3354 aa11.52□□□□□ -0.56
NIF3L1-202ENST00000409020 MYH8P13535 1937 aa11.52□□□□□ -0.57
NIF3L1-202ENST00000409020 ROBO3Q96MS0 1386 aa11.52□□□□□ -0.57
NIF3L1-202ENST00000409020 COL6A3P12111 3177 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms