RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 TBC1D8O95759 1140 aa14.3□□□□□ -0.12
RNF43-201ENST00000407977 IWS1Q96ST2 819 aa14.3□□□□□ -0.12
RNF43-201ENST00000407977 EFCC1Q9HA90 598 aa14.3□□□□□ -0.12
RNF43-201ENST00000407977 PFDN4Q9NQP4 134 aa14.3□□□□□ -0.12
RNF43-201ENST00000407977 HGSO14964 777 aaPredicted RBP14.3□□□□□ -0.12
RNF43-201ENST00000407977 AKNAD1Q5T1N1 836 aa14.3□□□□□ -0.12
RNF43-201ENST00000407977 NOSTRINQ8IVI9 506 aa14.3□□□□□ -0.12
RNF43-201ENST00000407977 ANKRD42Q8N9B4 389 aa14.3□□□□□ -0.12
RNF43-201ENST00000407977 EPN1Q9Y6I3 576 aaPredicted RBP14.3□□□□□ -0.12
RNF43-201ENST00000407977 ITSN2Q9NZM3 1697 aa14.3□□□□□ -0.12
RNF43-201ENST00000407977 TCOF1Q13428 1488 aaKnown RBP14.3□□□□□ -0.12
RNF43-201ENST00000407977 STMN1P16949 149 aa14.3□□□□□ -0.12
RNF43-201ENST00000407977 STRN3Q13033 797 aa14.3□□□□□ -0.12
RNF43-201ENST00000407977 CALCRLQ16602 461 aa14.3□□□□□ -0.12
RNF43-201ENST00000407977 RPAINQ86UA6 219 aa14.3□□□□□ -0.12
RNF43-201ENST00000407977 CCDC89Q8N998 374 aa14.3□□□□□ -0.12
RNF43-201ENST00000407977 PPP4R1Q8TF05 950 aa14.3□□□□□ -0.12
RNF43-201ENST00000407977 KCNK3O14649 394 aa14.3□□□□□ -0.12
RNF43-201ENST00000407977 PSMD6Q15008 389 aa14.3□□□□□ -0.12
RNF43-201ENST00000407977 GDAP1L1Q96MZ0 367 aa14.3□□□□□ -0.12
RNF43-201ENST00000407977 USP28Q96RU2 1077 aa14.3□□□□□ -0.12
RNF43-201ENST00000407977 IKBKBO14920 756 aa14.29□□□□□ -0.12
RNF43-201ENST00000407977 PARP10Q53GL7 1025 aa14.29□□□□□ -0.12
RNF43-201ENST00000407977 HELBQ8NG08 1087 aaPredicted RBP14.29□□□□□ -0.12
RNF43-201ENST00000407977 TRIM35Q9UPQ4 493 aa14.29□□□□□ -0.12
RNF43-201ENST00000407977 MCTP2Q6DN12 878 aa14.29□□□□□ -0.12
RNF43-201ENST00000407977 PPP1R13BQ96KQ4 1090 aa14.29□□□□□ -0.12
RNF43-201ENST00000407977 DESI2Q9BSY9 194 aa14.29□□□□□ -0.12
RNF43-201ENST00000407977 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.29□□□□□ -0.12
RNF43-201ENST00000407977 ABCC4O15439 1325 aa14.29□□□□□ -0.12
RNF43-201ENST00000407977 GAS2L3Q86XJ1 694 aa14.29□□□□□ -0.12
RNF43-201ENST00000407977 CCDC197Q8NCU1 140 aa14.29□□□□□ -0.12
RNF43-201ENST00000407977 ZNF622Q969S3 477 aaKnown RBP eCLIP14.29□□□□□ -0.12
RNF43-201ENST00000407977 CCT5P48643 541 aa14.29□□□□□ -0.12
RNF43-201ENST00000407977 ATP1A2P50993 1020 aa14.29□□□□□ -0.12
RNF43-201ENST00000407977 EPHB4P54760 987 aa14.29□□□□□ -0.12
RNF43-201ENST00000407977 PHKBQ93100 1093 aa14.29□□□□□ -0.12
RNF43-201ENST00000407977 HVCN1Q96D96 273 aa14.29□□□□□ -0.12
RNF43-201ENST00000407977 ARMT1Q9H993 441 aa14.29□□□□□ -0.12
RNF43-201ENST00000407977 RNF14Q9UBS8 474 aa14.29□□□□□ -0.12
RNF43-201ENST00000407977 GTPBP6O43824 516 aaPredicted RBP14.28□□□□□ -0.12
RNF43-201ENST00000407977 TEX11Q8IYF3 940 aa14.28□□□□□ -0.12
RNF43-201ENST00000407977 SIRT1Q96EB6 747 aa14.28□□□□□ -0.12
RNF43-201ENST00000407977 XRCC5P13010 732 aaKnown RBP14.28□□□□□ -0.12
RNF43-201ENST00000407977 IRX5P78411 483 aaPredicted RBP14.28□□□□□ -0.12
RNF43-201ENST00000407977 CCDC13Q8IYE1 715 aa14.28□□□□□ -0.12
RNF43-201ENST00000407977 EYA3Q99504 573 aa14.28□□□□□ -0.12
RNF43-201ENST00000407977 MAGEF1Q9HAY2 307 aa14.28□□□□□ -0.12
RNF43-201ENST00000407977 TNRQ92752 1358 aa14.28□□□□□ -0.12
RNF43-201ENST00000407977 TRPM2O94759 1503 aa14.28□□□□□ -0.12
RNF43-201ENST00000407977 PNMA6EA0A0J9YXQ4 647 aa14.28□□□□□ -0.12
RNF43-201ENST00000407977 SH3BP5O60239 455 aa14.28□□□□□ -0.12
RNF43-201ENST00000407977 ZBTB21Q9ULJ3 1066 aa14.28□□□□□ -0.12
RNF43-201ENST00000407977 PYCARDQ9ULZ3 195 aa14.28□□□□□ -0.12
RNF43-201ENST00000407977 F8W031 263 aaPredicted RBP14.28□□□□□ -0.12
RNF43-201ENST00000407977 RBM26Q5T8P6 1007 aaKnown RBP14.28□□□□□ -0.12
RNF43-201ENST00000407977 MYOCDQ8IZQ8 938 aa14.28□□□□□ -0.12
RNF43-201ENST00000407977 NLRC4Q9NPP4 1024 aa14.28□□□□□ -0.12
RNF43-201ENST00000407977 N4BP1O75113 896 aaKnown RBP14.28□□□□□ -0.12
RNF43-201ENST00000407977 CLTAP09496 248 aa14.28□□□□□ -0.12
RNF43-201ENST00000407977 IL13P35225 146 aa14.28□□□□□ -0.12
RNF43-201ENST00000407977 CHRNA2Q15822 529 aa14.28□□□□□ -0.12
RNF43-201ENST00000407977 RASIP1Q5U651 963 aa14.28□□□□□ -0.12
RNF43-201ENST00000407977 CDAN1Q8IWY9 1227 aa14.28□□□□□ -0.12
RNF43-201ENST00000407977 MGARPQ8TDB4 240 aa14.28□□□□□ -0.12
RNF43-201ENST00000407977 LPIN2Q92539 896 aa14.28□□□□□ -0.12
RNF43-201ENST00000407977 ACTR5Q9H9F9 607 aaPredicted RBP14.28□□□□□ -0.12
RNF43-201ENST00000407977 FANCLQ9NW38 375 aa14.28□□□□□ -0.12
RNF43-201ENST00000407977 YWHAEP62258 255 aaKnown RBP14.27□□□□□ -0.12
RNF43-201ENST00000407977 RETREG2Q8NC44 543 aa14.27□□□□□ -0.12
RNF43-201ENST00000407977 TTC16Q8NEE8 873 aa14.27□□□□□ -0.12
RNF43-201ENST00000407977 LSM14BQ9BX40 385 aaKnown RBP14.27□□□□□ -0.12
RNF43-201ENST00000407977 TRIM4Q9C037 500 aa14.27□□□□□ -0.12
RNF43-201ENST00000407977 BZW2Q9Y6E2 419 aaKnown RBP14.27□□□□□ -0.12
RNF43-201ENST00000407977 OPHN1O60890 802 aa14.27□□□□□ -0.12
RNF43-201ENST00000407977 MAN1A1P33908 653 aa14.27□□□□□ -0.12
RNF43-201ENST00000407977 DYMQ7RTS9 669 aa14.27□□□□□ -0.12
RNF43-201ENST00000407977 IP6K1Q92551 441 aa14.27□□□□□ -0.12
RNF43-201ENST00000407977 UHRF1BP1LA0JNW5 1464 aa14.27□□□□□ -0.13
RNF43-201ENST00000407977 MGEA5O60502 916 aa14.27□□□□□ -0.13
RNF43-201ENST00000407977 IL2RBP14784 551 aa14.27□□□□□ -0.13
RNF43-201ENST00000407977 ARHGAP4P98171 946 aa14.27□□□□□ -0.13
RNF43-201ENST00000407977 TRIM68Q6AZZ1 485 aa14.27□□□□□ -0.13
RNF43-201ENST00000407977 GALNT17Q6IS24 598 aa14.27□□□□□ -0.13
RNF43-201ENST00000407977 MIER3Q7Z3K6 550 aa14.27□□□□□ -0.13
RNF43-201ENST00000407977 PALM2Q8IXS6 379 aa14.27□□□□□ -0.13
RNF43-201ENST00000407977 U2AF1L4Q8WU68 220 aaKnown RBP14.27□□□□□ -0.13
RNF43-201ENST00000407977 KRT12Q99456 494 aa14.27□□□□□ -0.13
RNF43-201ENST00000407977 METTL14Q9HCE5 456 aaKnown RBP14.27□□□□□ -0.13
RNF43-201ENST00000407977 TRAPPC8Q9Y2L5 1435 aa14.27□□□□□ -0.13
RNF43-201ENST00000407977 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.27□□□□□ -0.13
RNF43-201ENST00000407977 ARHGAP42A6NI28 874 aa14.27□□□□□ -0.13
RNF43-201ENST00000407977 DAPK3O43293 454 aa14.27□□□□□ -0.13
RNF43-201ENST00000407977 H2AFZP0C0S5 128 aa14.27□□□□□ -0.13
RNF43-201ENST00000407977 ITGA6P23229 1130 aa14.27□□□□□ -0.13
RNF43-201ENST00000407977 H2AFVQ71UI9 128 aa14.27□□□□□ -0.13
RNF43-201ENST00000407977 SSH3Q8TE77 659 aa14.27□□□□□ -0.13
RNF43-201ENST00000407977 DDX27Q96GQ7 796 aaKnown RBP14.27□□□□□ -0.13
RNF43-201ENST00000407977 MRPL44Q9H9J2 332 aaKnown RBP14.27□□□□□ -0.13
RNF43-201ENST00000407977 HAUS2Q9NVX0 235 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms