RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 TBC1D9BQ66K14 1250 aa18.88■□□□□ 0.61
COL23A1-202ENST00000407622 STAMQ92783 540 aa18.88■□□□□ 0.61
COL23A1-202ENST00000407622 BAG1Q99933 345 aaPredicted RBP18.88■□□□□ 0.61
COL23A1-202ENST00000407622 DACH1Q9UI36 760 aa18.88■□□□□ 0.61
COL23A1-202ENST00000407622 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.88■□□□□ 0.61
COL23A1-202ENST00000407622 ARHGAP6O43182 974 aa18.87■□□□□ 0.61
COL23A1-202ENST00000407622 TEX33O43247 280 aa18.87■□□□□ 0.61
COL23A1-202ENST00000407622 ZNF772Q68DY9 489 aaPredicted RBP18.87■□□□□ 0.61
COL23A1-202ENST00000407622 KANK3Q6NY19 840 aa18.87■□□□□ 0.61
COL23A1-202ENST00000407622 CLEC4GQ6UXB4 293 aa18.87■□□□□ 0.61
COL23A1-202ENST00000407622 APTXQ7Z2E3 356 aaKnown RBP18.87■□□□□ 0.61
COL23A1-202ENST00000407622 SH3RF1Q7Z6J0 888 aa18.87■□□□□ 0.61
COL23A1-202ENST00000407622 FBXO33Q7Z6M2 555 aa18.87■□□□□ 0.61
COL23A1-202ENST00000407622 ZNF446Q9NWS9 450 aa18.87■□□□□ 0.61
COL23A1-202ENST00000407622 SLFN14P0C7P3 912 aa18.86■□□□□ 0.61
COL23A1-202ENST00000407622 PRDX5P30044 214 aa18.86■□□□□ 0.61
COL23A1-202ENST00000407622 KRT27Q7Z3Y8 459 aa18.86■□□□□ 0.61
COL23A1-202ENST00000407622 DCP1AQ9NPI6 582 aaPredicted RBP18.86■□□□□ 0.61
COL23A1-202ENST00000407622 RBM28Q9NW13 759 aaKnown RBP18.86■□□□□ 0.61
COL23A1-202ENST00000407622 MORC2Q9Y6X9 1032 aaPredicted RBP18.86■□□□□ 0.61
COL23A1-202ENST00000407622 CNTNAP4Q9C0A0 1308 aa18.86■□□□□ 0.61
COL23A1-202ENST00000407622 CCP110O43303 1012 aa18.86■□□□□ 0.61
COL23A1-202ENST00000407622 COBLO75128 1261 aa18.86■□□□□ 0.61
COL23A1-202ENST00000407622 NR1I3Q14994 352 aa18.86■□□□□ 0.61
COL23A1-202ENST00000407622 SLC51AQ86UW1 340 aa18.86■□□□□ 0.61
COL23A1-202ENST00000407622 CCNL1Q9UK58 526 aaPredicted RBP18.86■□□□□ 0.61
COL23A1-202ENST00000407622 CUL4BQ13620 913 aa18.85■□□□□ 0.61
COL23A1-202ENST00000407622 TTC38Q5R3I4 469 aa18.85■□□□□ 0.61
COL23A1-202ENST00000407622 SBF2Q86WG5 1849 aa18.85■□□□□ 0.61
COL23A1-202ENST00000407622 ERCC5P28715 1186 aaPredicted RBP18.85■□□□□ 0.61
COL23A1-202ENST00000407622 GTF2E1P29083 439 aaPredicted RBP18.85■□□□□ 0.61
COL23A1-202ENST00000407622 DPYDQ12882 1025 aa18.85■□□□□ 0.61
COL23A1-202ENST00000407622 PTGDRQ13258 359 aa18.85■□□□□ 0.61
COL23A1-202ENST00000407622 MTF1Q14872 753 aa18.85■□□□□ 0.61
COL23A1-202ENST00000407622 RC3H1Q5TC82 1133 aaKnown RBP18.85■□□□□ 0.61
COL23A1-202ENST00000407622 FAM196AQ6ZSG2 479 aa18.85■□□□□ 0.61
COL23A1-202ENST00000407622 FCHSD1Q86WN1 690 aa18.85■□□□□ 0.61
COL23A1-202ENST00000407622 WDR24Q96S15 920 aa18.85■□□□□ 0.61
COL23A1-202ENST00000407622 DESI2Q9BSY9 194 aa18.85■□□□□ 0.61
COL23A1-202ENST00000407622 PARP3Q9Y6F1 533 aa18.85■□□□□ 0.61
COL23A1-202ENST00000407622 A0A1B0GTH6 734 aa18.84■□□□□ 0.61
COL23A1-202ENST00000407622 DDAH1O94760 285 aa18.84■□□□□ 0.61
COL23A1-202ENST00000407622 URI1O94763 535 aaPredicted RBP18.84■□□□□ 0.61
COL23A1-202ENST00000407622 ZHX1Q9UKY1 873 aaPredicted RBP18.84■□□□□ 0.61
COL23A1-202ENST00000407622 TUBB4AP04350 444 aa18.84■□□□□ 0.61
COL23A1-202ENST00000407622 H2AFXP16104 143 aaPredicted RBP18.84■□□□□ 0.61
COL23A1-202ENST00000407622 PIK3AP1Q6ZUJ8 805 aa18.84■□□□□ 0.61
COL23A1-202ENST00000407622 TXNRD3Q86VQ6 643 aa18.84■□□□□ 0.61
COL23A1-202ENST00000407622 SRP68Q9UHB9 627 aaKnown RBP18.84■□□□□ 0.61
COL23A1-202ENST00000407622 LAMB1P07942 1786 aa18.84■□□□□ 0.61
COL23A1-202ENST00000407622 SYNRGQ9UMZ2 1314 aa18.83■□□□□ 0.61
COL23A1-202ENST00000407622 ZSCAN12O43309 604 aa18.83■□□□□ 0.61
COL23A1-202ENST00000407622 STX10O60499 249 aa18.83■□□□□ 0.61
COL23A1-202ENST00000407622 CALM1P0DP23 149 aa18.83■□□□□ 0.61
COL23A1-202ENST00000407622 CALM2P0DP24 149 aa18.83■□□□□ 0.61
COL23A1-202ENST00000407622 CALM3P0DP25 149 aa18.83■□□□□ 0.61
COL23A1-202ENST00000407622 IL17AQ16552 155 aa18.83■□□□□ 0.61
COL23A1-202ENST00000407622 UTP14CQ5TAP6 766 aaKnown RBP18.83■□□□□ 0.61
COL23A1-202ENST00000407622 FERMT2Q96AC1 680 aa18.83■□□□□ 0.61
COL23A1-202ENST00000407622 BLZF1Q9H2G9 400 aa18.83■□□□□ 0.61
COL23A1-202ENST00000407622 XDHP47989 1333 aa18.83■□□□□ 0.6
COL23A1-202ENST00000407622 EP400Q96L91 3159 aa18.83■□□□□ 0.6
COL23A1-202ENST00000407622 PPP1R3GB7ZBB8 358 aa18.83■□□□□ 0.6
COL23A1-202ENST00000407622 ORC4O43929 436 aa18.83■□□□□ 0.6
COL23A1-202ENST00000407622 ATP2C1P98194 919 aaPredicted RBP18.83■□□□□ 0.6
COL23A1-202ENST00000407622 ARHGAP29Q52LW3 1261 aa18.83■□□□□ 0.6
COL23A1-202ENST00000407622 KIAA1551Q9HCM1 1747 aa18.82■□□□□ 0.6
COL23A1-202ENST00000407622 RPS8P62241 208 aaKnown RBP18.82■□□□□ 0.6
COL23A1-202ENST00000407622 SPATA1Q5VX52 437 aa18.82■□□□□ 0.6
COL23A1-202ENST00000407622 CTCFLQ8NI51 663 aaPredicted RBP18.82■□□□□ 0.6
COL23A1-202ENST00000407622 MTRQ99707 1265 aa18.82■□□□□ 0.6
COL23A1-202ENST00000407622 NOL10Q9BSC4 688 aaKnown RBP18.82■□□□□ 0.6
COL23A1-202ENST00000407622 CARD6Q9BX69 1037 aa18.82■□□□□ 0.6
COL23A1-202ENST00000407622 BRMS1Q9HCU9 246 aa18.82■□□□□ 0.6
COL23A1-202ENST00000407622 E2F4Q16254 413 aa18.82■□□□□ 0.6
COL23A1-202ENST00000407622 RCSD1Q6JBY9 416 aa18.82■□□□□ 0.6
COL23A1-202ENST00000407622 A0A0U1RQJ8 604 aa18.81■□□□□ 0.6
COL23A1-202ENST00000407622 SOWAHDA6NJG2 315 aa18.81■□□□□ 0.6
COL23A1-202ENST00000407622 RPS6KA4O75676 772 aa18.81■□□□□ 0.6
COL23A1-202ENST00000407622 PCP11498 1178 aaKnown RBP18.81■□□□□ 0.6
COL23A1-202ENST00000407622 SCG2P13521 617 aa18.81■□□□□ 0.6
COL23A1-202ENST00000407622 HIBADHP31937 336 aaKnown RBP18.81■□□□□ 0.6
COL23A1-202ENST00000407622 MCM7P33993 719 aa18.81■□□□□ 0.6
COL23A1-202ENST00000407622 CLCN6P51797 869 aa18.81■□□□□ 0.6
COL23A1-202ENST00000407622 NLRP5P59047 1200 aa18.81■□□□□ 0.6
COL23A1-202ENST00000407622 SLC10A5Q5PT55 438 aa18.81■□□□□ 0.6
COL23A1-202ENST00000407622 CDKAL1Q5VV42 579 aa18.81■□□□□ 0.6
COL23A1-202ENST00000407622 ATRIPQ8WXE1 791 aa18.81■□□□□ 0.6
COL23A1-202ENST00000407622 GTPBP4Q9BZE4 634 aaKnown RBP18.81■□□□□ 0.6
COL23A1-202ENST00000407622 CRNKL1Q9BZJ0 848 aaKnown RBP18.81■□□□□ 0.6
COL23A1-202ENST00000407622 MRPL44Q9H9J2 332 aaKnown RBP18.81■□□□□ 0.6
COL23A1-202ENST00000407622 FAM53CQ9NYF3 392 aa18.81■□□□□ 0.6
COL23A1-202ENST00000407622 USP17L8P0C7I0 530 aa18.8■□□□□ 0.6
COL23A1-202ENST00000407622 GNG11P61952 73 aa18.8■□□□□ 0.6
COL23A1-202ENST00000407622 KARSQ15046 597 aaKnown RBP18.8■□□□□ 0.6
COL23A1-202ENST00000407622 CPLX3Q8WVH0 158 aa18.8■□□□□ 0.6
COL23A1-202ENST00000407622 ADD3Q9UEY8 706 aaKnown RBP18.8■□□□□ 0.6
COL23A1-202ENST00000407622 CTNND2Q9UQB3 1225 aa18.8■□□□□ 0.6
COL23A1-202ENST00000407622 BRWD3Q6RI45 1802 aa18.8■□□□□ 0.6
COL23A1-202ENST00000407622 TADA3O75528 432 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms