RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 DNAJC18Q9H819 358 aa9.86□□□□□ -0.83
GPC3-203ENST00000406757 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.86□□□□□ -0.836e-8■■■□□ 17
GPC3-203ENST00000406757 MKNK2Q9HBH9 465 aa9.86□□□□□ -0.83
GPC3-203ENST00000406757 PI4KBQ9UBF8 816 aa9.86□□□□□ -0.83
GPC3-203ENST00000406757 CIZ1Q9ULV3 898 aaPredicted RBP9.86□□□□□ -0.83
GPC3-203ENST00000406757 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.86□□□□□ -0.83
GPC3-203ENST00000406757 CSADQ9Y600 493 aa9.86□□□□□ -0.83
GPC3-203ENST00000406757 DDX60LQ5H9U9 1706 aaKnown RBP9.85□□□□□ -0.83
GPC3-203ENST00000406757 NMT2O60551 498 aa9.85□□□□□ -0.83
GPC3-203ENST00000406757 GDF11O95390 407 aa9.85□□□□□ -0.83
GPC3-203ENST00000406757 SLC3A2P08195 630 aaKnown RBP9.85□□□□□ -0.83
GPC3-203ENST00000406757 AKR1B1P15121 316 aa9.85□□□□□ -0.83
GPC3-203ENST00000406757 RASA1P20936 1047 aa9.85□□□□□ -0.83
GPC3-203ENST00000406757 SHMT1P34896 483 aa9.85□□□□□ -0.83
GPC3-203ENST00000406757 GTF2A2P52657 109 aa9.85□□□□□ -0.83
GPC3-203ENST00000406757 ANTXR2P58335 489 aa9.85□□□□□ -0.83
GPC3-203ENST00000406757 ANAPC15P60006 121 aa9.85□□□□□ -0.83
GPC3-203ENST00000406757 JAG1P78504 1218 aa9.85□□□□□ -0.83
GPC3-203ENST00000406757 TFAP4Q01664 338 aa9.85□□□□□ -0.83
GPC3-203ENST00000406757 GABPAQ06546 454 aa9.85□□□□□ -0.83
GPC3-203ENST00000406757 PDE4BQ07343 736 aa9.85□□□□□ -0.83
GPC3-203ENST00000406757 TRDNQ13061 729 aa9.85□□□□□ -0.83
GPC3-203ENST00000406757 BLOC1S2Q6QNY1 142 aa9.85□□□□□ -0.83
GPC3-203ENST00000406757 C16orf86Q6ZW13 317 aa9.85□□□□□ -0.83
GPC3-203ENST00000406757 RALYLQ86SE5 291 aaKnown RBP9.85□□□□□ -0.83
GPC3-203ENST00000406757 FOXP4Q8IVH2 680 aaPredicted RBP9.85□□□□□ -0.83
GPC3-203ENST00000406757 MB21D2Q8IYB1 491 aaPredicted RBP9.85□□□□□ -0.83
GPC3-203ENST00000406757 ZNF444Q8N0Y2 327 aaPredicted RBP9.85□□□□□ -0.83
GPC3-203ENST00000406757 NCOA7Q8NI08 942 aa9.85□□□□□ -0.83
GPC3-203ENST00000406757 CHMP4CQ96CF2 233 aa9.85□□□□□ -0.83
GPC3-203ENST00000406757 ZFYVE28Q9HCC9 887 aa9.85□□□□□ -0.83
GPC3-203ENST00000406757 ZSWIM6Q9HCJ5 1215 aa9.85□□□□□ -0.83
GPC3-203ENST00000406757 ZSWIM5Q9P217 1185 aa9.85□□□□□ -0.83
GPC3-203ENST00000406757 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.85□□□□□ -0.83
GPC3-203ENST00000406757 SERPINB13Q9UIV8 391 aa9.85□□□□□ -0.83
GPC3-203ENST00000406757 PTCH2Q9Y6C5 1203 aa9.85□□□□□ -0.83
GPC3-203ENST00000406757 SIPA1L1O43166 1804 aa9.84□□□□□ -0.83
GPC3-203ENST00000406757 LAMA4Q16363 1823 aa9.84□□□□□ -0.83
GPC3-203ENST00000406757 SPDYE5A6NIY4 337 aa9.84□□□□□ -0.83
GPC3-203ENST00000406757 MPHOSPH10O00566 681 aaKnown RBP9.84□□□□□ -0.83
GPC3-203ENST00000406757 PRC1O43663 620 aa9.84□□□□□ -0.83
GPC3-203ENST00000406757 CD2BP2O95400 341 aaKnown RBP9.84□□□□□ -0.83
GPC3-203ENST00000406757 MYCP01106 439 aaPredicted RBP9.84□□□□□ -0.83
GPC3-203ENST00000406757 RPS6KB1P23443 525 aa9.84□□□□□ -0.83
GPC3-203ENST00000406757 PSMA5P28066 241 aa9.84□□□□□ -0.83
GPC3-203ENST00000406757 KRT32Q14532 448 aa9.84□□□□□ -0.83
GPC3-203ENST00000406757 SLC9C1Q4G0N8 1177 aa9.84□□□□□ -0.83
GPC3-203ENST00000406757 Q6ZUG5 572 aa9.84□□□□□ -0.83
GPC3-203ENST00000406757 RUFY3Q7L099 469 aa9.84□□□□□ -0.83
GPC3-203ENST00000406757 CLEC10AQ8IUN9 316 aa9.84□□□□□ -0.83
GPC3-203ENST00000406757 PDCD7Q8N8D1 485 aaKnown RBP9.84□□□□□ -0.83
GPC3-203ENST00000406757 ZKSCAN4Q969J2 545 aaPredicted RBP9.84□□□□□ -0.83
GPC3-203ENST00000406757 ZNF333Q96JL9 665 aa9.84□□□□□ -0.83
GPC3-203ENST00000406757 WRNIP1Q96S55 665 aa9.84□□□□□ -0.83
GPC3-203ENST00000406757 RNF41Q9H4P4 317 aaPredicted RBP9.84□□□□□ -0.83
GPC3-203ENST00000406757 SENP2Q9HC62 589 aa9.84□□□□□ -0.83
GPC3-203ENST00000406757 PDRG1Q9NUG6 133 aa9.84□□□□□ -0.83
GPC3-203ENST00000406757 CYP46A1Q9Y6A2 500 aa9.84□□□□□ -0.83
GPC3-203ENST00000406757 SNCAIPQ9Y6H5 919 aa9.84□□□□□ -0.83
GPC3-203ENST00000406757 ATRNL1Q5VV63 1379 aa9.84□□□□□ -0.83
GPC3-203ENST00000406757 TSPY2A6NKD2 308 aa9.83□□□□□ -0.84
GPC3-203ENST00000406757 IRF6O14896 467 aa9.83□□□□□ -0.84
GPC3-203ENST00000406757 ORC4O43929 436 aa9.83□□□□□ -0.84
GPC3-203ENST00000406757 DTNBO60941 627 aa9.83□□□□□ -0.84
GPC3-203ENST00000406757 ECM2O94769 699 aaPredicted RBP9.83□□□□□ -0.84
GPC3-203ENST00000406757 FGRP09769 529 aa9.83□□□□□ -0.84
GPC3-203ENST00000406757 EXOSC10Q01780 885 aaKnown RBP9.83□□□□□ -0.84
GPC3-203ENST00000406757 RABEP1Q15276 862 aa9.83□□□□□ -0.84
GPC3-203ENST00000406757 CERKLQ49MI3 558 aaPredicted RBP9.83□□□□□ -0.84
GPC3-203ENST00000406757 HABP4Q5JVS0 413 aaKnown RBP9.83□□□□□ -0.84
GPC3-203ENST00000406757 DHX32Q7L7V1 743 aaKnown RBP9.83□□□□□ -0.84
GPC3-203ENST00000406757 ZNF467Q7Z7K2 595 aaPredicted RBP9.83□□□□□ -0.84
GPC3-203ENST00000406757 CCDC84Q86UT8 332 aaPredicted RBP9.83□□□□□ -0.84
GPC3-203ENST00000406757 RAB11FIP4Q86YS3 637 aa9.83□□□□□ -0.84
GPC3-203ENST00000406757 ESR2Q92731 530 aa9.83□□□□□ -0.84
GPC3-203ENST00000406757 IL17RAQ96F46 866 aa9.83□□□□□ -0.84
GPC3-203ENST00000406757 TM6SF1Q9BZW5 370 aa9.83□□□□□ -0.84
GPC3-203ENST00000406757 KRT23Q9C075 422 aa9.83□□□□□ -0.84
GPC3-203ENST00000406757 ARHGAP39Q9C0H5 1083 aa9.83□□□□□ -0.84
GPC3-203ENST00000406757 EHD4Q9H223 541 aa9.83□□□□□ -0.84
GPC3-203ENST00000406757 ROBO3Q96MS0 1386 aa9.83□□□□□ -0.84
GPC3-203ENST00000406757 BTBD19C9JJ37 291 aa9.82□□□□□ -0.84
GPC3-203ENST00000406757 IFIT3O14879 490 aaKnown RBP9.82□□□□□ -0.84
GPC3-203ENST00000406757 TLR2O60603 784 aa9.82□□□□□ -0.84
GPC3-203ENST00000406757 TSPY3P0CV98 308 aa9.82□□□□□ -0.84
GPC3-203ENST00000406757 TSPY8P0CW00 308 aa9.82□□□□□ -0.84
GPC3-203ENST00000406757 CETPP11597 493 aa9.82□□□□□ -0.84
GPC3-203ENST00000406757 INPP5BP32019 993 aa9.82□□□□□ -0.84
GPC3-203ENST00000406757 MCM5P33992 734 aa9.82□□□□□ -0.84
GPC3-203ENST00000406757 SLC4A3P48751 1232 aa9.82□□□□□ -0.84
GPC3-203ENST00000406757 AK2P54819 239 aa9.82□□□□□ -0.84
GPC3-203ENST00000406757 FGD1P98174 961 aa9.82□□□□□ -0.84
GPC3-203ENST00000406757 TOB2Q14106 344 aaPredicted RBP9.82□□□□□ -0.84
GPC3-203ENST00000406757 ARHGEF6Q15052 776 aa9.82□□□□□ -0.84
GPC3-203ENST00000406757 TATDN1Q6P1N9 297 aa9.82□□□□□ -0.84
GPC3-203ENST00000406757 NBPF11Q86T75 865 aa9.82□□□□□ -0.84
GPC3-203ENST00000406757 METTL16Q86W50 562 aaKnown RBP9.82□□□□□ -0.84
GPC3-203ENST00000406757 ERO1BQ86YB8 467 aa9.82□□□□□ -0.84
GPC3-203ENST00000406757 SH3TC2Q8TF17 1288 aa9.82□□□□□ -0.84
GPC3-203ENST00000406757 TTC14Q96N46 770 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms