RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 REC8O95072 547 aa12.52□□□□□ -0.41
RPAIN-204ENST00000405578 HMGCRP04035 888 aa12.52□□□□□ -0.41
RPAIN-204ENST00000405578 C12orf60Q5U649 245 aa12.52□□□□□ -0.41
RPAIN-204ENST00000405578 VPS53Q5VIR6 699 aa12.52□□□□□ -0.41
RPAIN-204ENST00000405578 CTR9Q6PD62 1173 aa12.52□□□□□ -0.41
RPAIN-204ENST00000405578 FASTKD5Q7L8L6 764 aaKnown RBP12.52□□□□□ -0.41
RPAIN-204ENST00000405578 PRRT2Q7Z6L0 340 aaPredicted RBP12.52□□□□□ -0.41
RPAIN-204ENST00000405578 ANO2Q9NQ90 1003 aa12.52□□□□□ -0.41
RPAIN-204ENST00000405578 LTBP2Q14767 1821 aa12.52□□□□□ -0.41
RPAIN-204ENST00000405578 ZMYM6O95789 1325 aa12.52□□□□□ -0.41
RPAIN-204ENST00000405578 PRUNE2Q8WUY3 3088 aa12.51□□□□□ -0.41
RPAIN-204ENST00000405578 FGAP02671 866 aa12.51□□□□□ -0.41
RPAIN-204ENST00000405578 PLCD1P51178 756 aa12.51□□□□□ -0.41
RPAIN-204ENST00000405578 MDM2Q00987 491 aaPredicted RBP12.51□□□□□ -0.41
RPAIN-204ENST00000405578 MAP3K10Q02779 954 aa12.51□□□□□ -0.41
RPAIN-204ENST00000405578 PDE4BQ07343 736 aa12.51□□□□□ -0.41
RPAIN-204ENST00000405578 TRIM32Q13049 653 aa12.51□□□□□ -0.41
RPAIN-204ENST00000405578 IMMTQ16891 758 aaKnown RBP12.51□□□□□ -0.41
RPAIN-204ENST00000405578 FAM109BQ6ICB4 259 aaPredicted RBP12.51□□□□□ -0.41
RPAIN-204ENST00000405578 ANKRD13CQ8N6S4 541 aa12.51□□□□□ -0.41
RPAIN-204ENST00000405578 EPB41L4AQ9HCS5 686 aaPredicted RBP12.51□□□□□ -0.41
RPAIN-204ENST00000405578 HMX1Q9NP08 348 aaPredicted RBP12.51□□□□□ -0.41
RPAIN-204ENST00000405578 PICK1Q9NRD5 415 aa12.51□□□□□ -0.41
RPAIN-204ENST00000405578 ZHX2Q9Y6X8 837 aa12.51□□□□□ -0.41
RPAIN-204ENST00000405578 U3KPZ7 1027 aaPredicted RBP12.51□□□□□ -0.41
RPAIN-204ENST00000405578 PFASO15067 1338 aa12.51□□□□□ -0.41
RPAIN-204ENST00000405578 SPTBN5Q9NRC6 3674 aaKnown RBP12.5□□□□□ -0.41
RPAIN-204ENST00000405578 POTEB2H3BUK9 544 aa12.5□□□□□ -0.41
RPAIN-204ENST00000405578 ZNF213O14771 459 aa12.5□□□□□ -0.41
RPAIN-204ENST00000405578 CTNND1O60716 968 aaKnown RBP12.5□□□□□ -0.41
RPAIN-204ENST00000405578 PPARAQ07869 468 aa12.5□□□□□ -0.41
RPAIN-204ENST00000405578 METTL16Q86W50 562 aaKnown RBP12.5□□□□□ -0.41
RPAIN-204ENST00000405578 SCYL3Q8IZE3 742 aa12.5□□□□□ -0.41
RPAIN-204ENST00000405578 RNF41Q9H4P4 317 aaPredicted RBP12.5□□□□□ -0.41
RPAIN-204ENST00000405578 MKNK2Q9HBH9 465 aa12.5□□□□□ -0.41
RPAIN-204ENST00000405578 GINM1Q9NU53 330 aa12.5□□□□□ -0.41
RPAIN-204ENST00000405578 SLC45A1Q9Y2W3 748 aa12.5□□□□□ -0.41
RPAIN-204ENST00000405578 CYP2D6P10635 497 aa12.49□□□□□ -0.41
RPAIN-204ENST00000405578 PCP11498 1178 aaKnown RBP12.49□□□□□ -0.41
RPAIN-204ENST00000405578 FAM110CQ1W6H9 321 aa12.49□□□□□ -0.41
RPAIN-204ENST00000405578 CERKLQ49MI3 558 aaPredicted RBP12.49□□□□□ -0.41
RPAIN-204ENST00000405578 ZNF697Q5TEC3 545 aa12.49□□□□□ -0.41
RPAIN-204ENST00000405578 RNF20Q5VTR2 975 aa12.49□□□□□ -0.41
RPAIN-204ENST00000405578 CABP5Q9NP86 173 aa12.49□□□□□ -0.41
RPAIN-204ENST00000405578 OGDHLQ9ULD0 1010 aa12.49□□□□□ -0.41
RPAIN-204ENST00000405578 AFG3L2Q9Y4W6 797 aa12.49□□□□□ -0.41
RPAIN-204ENST00000405578 CYP2D7A0A087X1C5 515 aa12.48□□□□□ -0.41
RPAIN-204ENST00000405578 PHF20L1A8MW92 1017 aa12.48□□□□□ -0.41
RPAIN-204ENST00000405578 PTPRAP18433 802 aa12.48□□□□□ -0.41
RPAIN-204ENST00000405578 CDK8P49336 464 aa12.48□□□□□ -0.41
RPAIN-204ENST00000405578 NT5C2P49902 561 aa12.48□□□□□ -0.41
RPAIN-204ENST00000405578 GABPAQ06546 454 aa12.48□□□□□ -0.41
RPAIN-204ENST00000405578 C16orf86Q6ZW13 317 aa12.48□□□□□ -0.41
RPAIN-204ENST00000405578 ZNF444Q8N0Y2 327 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-204ENST00000405578 MAFAQ8NHW3 353 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-204ENST00000405578 MAP4K1Q92918 833 aa12.48□□□□□ -0.41
RPAIN-204ENST00000405578 CCDC17Q96LX7 622 aa12.48□□□□□ -0.41
RPAIN-204ENST00000405578 ANAPC4Q9UJX5 808 aa12.48□□□□□ -0.41
RPAIN-204ENST00000405578 TRIM75PA6NK02 468 aa12.47□□□□□ -0.41
RPAIN-204ENST00000405578 FAM196BA6NMK8 535 aa12.47□□□□□ -0.41
RPAIN-204ENST00000405578 MPHOSPH10O00566 681 aaKnown RBP12.47□□□□□ -0.41
RPAIN-204ENST00000405578 FOXP2O15409 715 aa12.47□□□□□ -0.41
RPAIN-204ENST00000405578 EPB41L2O43491 1005 aaKnown RBP12.47□□□□□ -0.41
RPAIN-204ENST00000405578 ASNSP08243 561 aa12.47□□□□□ -0.41
RPAIN-204ENST00000405578 COL9A1P20849 921 aa12.47□□□□□ -0.41
RPAIN-204ENST00000405578 CAP2P40123 477 aa12.47□□□□□ -0.41
RPAIN-204ENST00000405578 TRDNQ13061 729 aa12.47□□□□□ -0.41
RPAIN-204ENST00000405578 LRRC26Q2I0M4 334 aa12.47□□□□□ -0.41
RPAIN-204ENST00000405578 TATDN1Q6P1N9 297 aa12.47□□□□□ -0.41
RPAIN-204ENST00000405578 MFSD6Q6ZSS7 791 aa12.47□□□□□ -0.41
RPAIN-204ENST00000405578 CCDC84Q86UT8 332 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-204ENST00000405578 TRIB2Q92519 343 aa12.47□□□□□ -0.41
RPAIN-204ENST00000405578 DYNLL2Q96FJ2 89 aa12.47□□□□□ -0.41
RPAIN-204ENST00000405578 LSG1Q9H089 658 aaKnown RBP12.47□□□□□ -0.41
RPAIN-204ENST00000405578 IL25Q9H293 177 aa12.47□□□□□ -0.41
RPAIN-204ENST00000405578 TOMM22Q9NS69 142 aa12.47□□□□□ -0.41
RPAIN-204ENST00000405578 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-204ENST00000405578 AGTPBP1Q9UPW5 1226 aa12.47□□□□□ -0.41
RPAIN-204ENST00000405578 DNAH12Q6ZR08 3092 aa12.46□□□□□ -0.41
RPAIN-204ENST00000405578 ROBO3Q96MS0 1386 aa12.46□□□□□ -0.41
RPAIN-204ENST00000405578 ZKSCAN1P17029 563 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-204ENST00000405578 MCCP23508 829 aa12.46□□□□□ -0.41
RPAIN-204ENST00000405578 SHMT1P34896 483 aa12.46□□□□□ -0.41
RPAIN-204ENST00000405578 HAND2P61296 217 aa12.46□□□□□ -0.41
RPAIN-204ENST00000405578 PTH1RQ03431 593 aa12.46□□□□□ -0.41
RPAIN-204ENST00000405578 ABCB5Q2M3G0 1257 aa12.46□□□□□ -0.41
RPAIN-204ENST00000405578 PPP4R3BQ5MIZ7 849 aa12.46□□□□□ -0.41
RPAIN-204ENST00000405578 TREML2Q5T2D2 321 aa12.46□□□□□ -0.41
RPAIN-204ENST00000405578 STK11IPQ8N1F8 1099 aa12.46□□□□□ -0.41
RPAIN-204ENST00000405578 CDX2Q99626 313 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-204ENST00000405578 TBC1D2Q9BYX2 928 aa12.46□□□□□ -0.41
RPAIN-204ENST00000405578 CNNM2Q9H8M5 875 aa12.46□□□□□ -0.41
RPAIN-204ENST00000405578 AS3MTQ9HBK9 375 aa12.46□□□□□ -0.41
RPAIN-204ENST00000405578 PNMA3Q9UL41 463 aa12.46□□□□□ -0.41
RPAIN-204ENST00000405578 RBM8AQ9Y5S9 174 aaKnown RBP12.46□□□□□ -0.41
RPAIN-204ENST00000405578 SLURP2P0DP57 97 aa12.45□□□□□ -0.42
RPAIN-204ENST00000405578 COL6A1P12109 1028 aa12.45□□□□□ -0.42
RPAIN-204ENST00000405578 PRKAR2AP13861 404 aaKnown RBP12.45□□□□□ -0.42
RPAIN-204ENST00000405578 KCNA4P22459 653 aa12.45□□□□□ -0.42
RPAIN-204ENST00000405578 CTDSPL2Q05D32 466 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms