RNA–Protein interactions for RNA: ENST00000403538.1

TPT1P4-201, Transcript of tumor protein, translationally-controlled 1 pseudogene 4, humanhuman

BASIC

Gene TPT1P4, Length 519 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1P4-201ENST00000403538 COA1Q9GZY4 146 aa10.75□□□□□ -0.69
TPT1P4-201ENST00000403538 TMX4Q9H1E5 349 aaPredicted RBP10.75□□□□□ -0.69
TPT1P4-201ENST00000403538 CLSTN2Q9H4D0 955 aa10.75□□□□□ -0.69
TPT1P4-201ENST00000403538 MKRN1Q9UHC7 482 aaKnown RBP10.75□□□□□ -0.69
TPT1P4-201ENST00000403538 NSFL1CQ9UNZ2 370 aaKnown RBP10.75□□□□□ -0.69
TPT1P4-201ENST00000403538 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.75□□□□□ -0.69
TPT1P4-201ENST00000403538 NEDD4P46934 1319 aa10.75□□□□□ -0.69
TPT1P4-201ENST00000403538 LAMB1P07942 1786 aa10.75□□□□□ -0.69
TPT1P4-201ENST00000403538 TNRC6CQ9HCJ0 1690 aaKnown RBP10.74□□□□□ -0.69
TPT1P4-201ENST00000403538 FAM237AA0A1B0GTK4 181 aa10.74□□□□□ -0.69
TPT1P4-201ENST00000403538 SMARCA1P28370 1054 aa10.74□□□□□ -0.69
TPT1P4-201ENST00000403538 GNAQP50148 359 aa10.74□□□□□ -0.69
TPT1P4-201ENST00000403538 FAM160A1Q05DH4 1040 aa10.74□□□□□ -0.69
TPT1P4-201ENST00000403538 RTN1Q16799 776 aa10.74□□□□□ -0.69
TPT1P4-201ENST00000403538 MYSM1Q5VVJ2 828 aa10.74□□□□□ -0.69
TPT1P4-201ENST00000403538 CC2D2BQ6DHV5 1058 aa10.74□□□□□ -0.69
TPT1P4-201ENST00000403538 CTR9Q6PD62 1173 aa10.74□□□□□ -0.69
TPT1P4-201ENST00000403538 CCDC73Q6ZRK6 1079 aa10.74□□□□□ -0.69
TPT1P4-201ENST00000403538 CATIPQ7Z7H3 387 aa10.74□□□□□ -0.69
TPT1P4-201ENST00000403538 FERMT3Q86UX7 667 aa10.74□□□□□ -0.69
TPT1P4-201ENST00000403538 DZIP1Q86YF9 867 aaKnown RBP10.74□□□□□ -0.69
TPT1P4-201ENST00000403538 LINC00301Q8NCQ3 95 aa10.74□□□□□ -0.69
TPT1P4-201ENST00000403538 ZSCAN10Q96SZ4 725 aaPredicted RBP10.74□□□□□ -0.69
TPT1P4-201ENST00000403538 SPSB2Q99619 263 aa10.74□□□□□ -0.69
TPT1P4-201ENST00000403538 RBSNQ9H1K0 784 aa10.74□□□□□ -0.69
TPT1P4-201ENST00000403538 GDPD2Q9HCC8 539 aa10.74□□□□□ -0.69
TPT1P4-201ENST00000403538 CD209Q9NNX6 404 aa10.74□□□□□ -0.69
TPT1P4-201ENST00000403538 DCP1AQ9NPI6 582 aaPredicted RBP10.74□□□□□ -0.69
TPT1P4-201ENST00000403538 USP25Q9UHP3 1055 aa10.74□□□□□ -0.69
TPT1P4-201ENST00000403538 ATP6V0A2Q9Y487 856 aa10.74□□□□□ -0.69
TPT1P4-201ENST00000403538 MYH2Q9UKX2 1941 aa10.74□□□□□ -0.69
TPT1P4-201ENST00000403538 QSER1Q2KHR3 1735 aa10.73□□□□□ -0.69
TPT1P4-201ENST00000403538 GPR75-ASB3A0A0A6YYF3 556 aa10.73□□□□□ -0.69
TPT1P4-201ENST00000403538 A0A0G2JLW4 131 aa10.73□□□□□ -0.69
TPT1P4-201ENST00000403538 LOC100996750A0A140TA64 210 aa10.73□□□□□ -0.69
TPT1P4-201ENST00000403538 SNAP23O00161 211 aa10.73□□□□□ -0.69
TPT1P4-201ENST00000403538 PRPF3O43395 683 aaKnown RBP10.73□□□□□ -0.69
TPT1P4-201ENST00000403538 KIF5BP33176 963 aa10.73□□□□□ -0.69
TPT1P4-201ENST00000403538 KCNQ4P56696 695 aa10.73□□□□□ -0.69
TPT1P4-201ENST00000403538 KIF23Q02241 960 aaPredicted RBP10.73□□□□□ -0.69
TPT1P4-201ENST00000403538 SLC39A14Q15043 492 aa10.73□□□□□ -0.69
TPT1P4-201ENST00000403538 RILPL1Q5EBL4 403 aa10.73□□□□□ -0.69
TPT1P4-201ENST00000403538 CHST3Q7LGC8 479 aa10.73□□□□□ -0.69
TPT1P4-201ENST00000403538 ZNF654Q8IZM8 581 aa10.73□□□□□ -0.69
TPT1P4-201ENST00000403538 CRACR2BQ8N4Y2 399 aaPredicted RBP10.73□□□□□ -0.69
TPT1P4-201ENST00000403538 LZTS2Q9BRK4 669 aa10.73□□□□□ -0.69
TPT1P4-201ENST00000403538 ALG1Q9BT22 464 aa10.73□□□□□ -0.69
TPT1P4-201ENST00000403538 KRTAP4-6Q9BYQ5 205 aa10.73□□□□□ -0.69
TPT1P4-201ENST00000403538 TNMDQ9H2S6 317 aa10.73□□□□□ -0.69
TPT1P4-201ENST00000403538 NCOA5Q9HCD5 579 aaKnown RBP10.73□□□□□ -0.69
TPT1P4-201ENST00000403538 FAM217BQ9NTX9 383 aaPredicted RBP10.73□□□□□ -0.69
TPT1P4-201ENST00000403538 NAP1L2Q9ULW6 460 aaPredicted RBP10.73□□□□□ -0.69
TPT1P4-201ENST00000403538 CEP131Q9UPN4 1083 aa10.73□□□□□ -0.69
TPT1P4-201ENST00000403538 MYO3BQ8WXR4 1341 aa10.73□□□□□ -0.69
TPT1P4-201ENST00000403538 COL4A1P02462 1669 aa10.73□□□□□ -0.69
TPT1P4-201ENST00000403538 LTBP1Q14766 1721 aa10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 SPTLC2O15270 562 aa10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 PRKAB2O43741 272 aa10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 TRIM37O94972 964 aa10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 CMA1P23946 247 aa10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 MLLT3P42568 568 aaPredicted RBP10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 AKAP17AQ02040 695 aaKnown RBP10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 CTDSPL2Q05D32 466 aa10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 PTGDRQ13258 359 aa10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 DHX8Q14562 1220 aaKnown RBP10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 C12orf60Q5U649 245 aa10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 ANO1Q5XXA6 986 aa10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 KRT40Q6A162 431 aa10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 GALNT17Q6IS24 598 aa10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 ADGRA1Q86SQ6 560 aa10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 MIGA1Q8NAN2 632 aa10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 ENGASEQ8NFI3 743 aa10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 FAM200AQ8TCP9 573 aa10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 BICD2Q8TD16 824 aa10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 ZNF384Q8TF68 577 aa10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 MASTLQ96GX5 879 aa10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 EYA3Q99504 573 aa10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 SH3GLB2Q9NR46 395 aa10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 GAKO14976 1311 aa10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 C10orf71Q711Q0 1435 aa10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 MYH6P13533 1939 aa10.72□□□□□ -0.69
TPT1P4-201ENST00000403538 MROH7-TTC4A0A0A0MT08 1334 aa10.71□□□□□ -0.69
TPT1P4-201ENST00000403538 USP17L12C9JPN9 530 aa10.71□□□□□ -0.69
TPT1P4-201ENST00000403538 USP17L21D6R901 530 aa10.71□□□□□ -0.69
TPT1P4-201ENST00000403538 TERTO14746 1132 aaKnown RBP10.71□□□□□ -0.69
TPT1P4-201ENST00000403538 KINO60870 393 aaKnown RBP10.71□□□□□ -0.69
TPT1P4-201ENST00000403538 TNKSO95271 1327 aa10.71□□□□□ -0.69
TPT1P4-201ENST00000403538 SRGNP10124 158 aa10.71□□□□□ -0.69
TPT1P4-201ENST00000403538 TRAPPC10P48553 1259 aa10.71□□□□□ -0.69
TPT1P4-201ENST00000403538 HDLBPQ00341 1268 aaKnown RBP10.71□□□□□ -0.69
TPT1P4-201ENST00000403538 TROAPQ12815 778 aa10.71□□□□□ -0.69
TPT1P4-201ENST00000403538 IFIT1BQ5T764 474 aaKnown RBP10.71□□□□□ -0.69
TPT1P4-201ENST00000403538 LCE2CQ5TA81 110 aa10.71□□□□□ -0.69
TPT1P4-201ENST00000403538 AMIGO3Q86WK7 504 aa10.71□□□□□ -0.69
TPT1P4-201ENST00000403538 MRPS27Q92552 414 aaKnown RBP10.71□□□□□ -0.69
TPT1P4-201ENST00000403538 CCDC34Q96HJ3 373 aa10.71□□□□□ -0.69
TPT1P4-201ENST00000403538 PGBD1Q96JS3 809 aa10.71□□□□□ -0.69
TPT1P4-201ENST00000403538 USP28Q96RU2 1077 aa10.71□□□□□ -0.69
TPT1P4-201ENST00000403538 DACT1Q9NYF0 836 aa10.71□□□□□ -0.69
TPT1P4-201ENST00000403538 TFCP2L1Q9NZI6 479 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms