RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 LRRC47Q8N1G4 583 aaKnown RBP18.75■□□□□ 0.59
HMGA1-204ENST00000401473 TBC1D2Q9BYX2 928 aa18.75■□□□□ 0.59
HMGA1-204ENST00000401473 A0A0G2JLL6 359 aaPredicted RBP18.74■□□□□ 0.59
HMGA1-204ENST00000401473 PRRT2Q7Z6L0 340 aaPredicted RBP18.74■□□□□ 0.59
HMGA1-204ENST00000401473 LY9Q9HBG7 655 aa18.74■□□□□ 0.59
HMGA1-204ENST00000401473 ARHGEF10LQ9HCE6 1279 aa18.74■□□□□ 0.59
HMGA1-204ENST00000401473 MAP2K2P36507 400 aa18.73■□□□□ 0.59
HMGA1-204ENST00000401473 TMEM67Q5HYA8 995 aa18.73■□□□□ 0.59
HMGA1-204ENST00000401473 SH3D19Q5HYK7 790 aa18.73■□□□□ 0.59
HMGA1-204ENST00000401473 CHMP4CQ96CF2 233 aa18.73■□□□□ 0.59
HMGA1-204ENST00000401473 TMEM87BQ96K49 555 aa18.73■□□□□ 0.59
HMGA1-204ENST00000401473 PTPN18Q99952 460 aa18.73■□□□□ 0.59
HMGA1-204ENST00000401473 C19orf81C9J6K1 198 aa18.73■□□□□ 0.59
HMGA1-204ENST00000401473 F5H6K3 240 aa18.73■□□□□ 0.59
HMGA1-204ENST00000401473 SH2B2O14492 632 aaPredicted RBP18.73■□□□□ 0.59
HMGA1-204ENST00000401473 KLRC3Q07444 240 aa18.73■□□□□ 0.59
HMGA1-204ENST00000401473 SNAPC2Q13487 334 aa18.73■□□□□ 0.59
HMGA1-204ENST00000401473 IFIT1BQ5T764 474 aaKnown RBP18.73■□□□□ 0.59
HMGA1-204ENST00000401473 SPICE1Q8N0Z3 855 aa18.73■□□□□ 0.59
HMGA1-204ENST00000401473 BRI3BPQ8WY22 251 aa18.73■□□□□ 0.59
HMGA1-204ENST00000401473 FEZ1Q99689 392 aa18.73■□□□□ 0.59
HMGA1-204ENST00000401473 MTA3Q9BTC8 594 aa18.73■□□□□ 0.59
HMGA1-204ENST00000401473 CYP46A1Q9Y6A2 500 aa18.73■□□□□ 0.59
HMGA1-204ENST00000401473 WDR19Q8NEZ3 1342 aa18.72■□□□□ 0.59
HMGA1-204ENST00000401473 TOP1P11387 765 aaKnown RBP18.72■□□□□ 0.59
HMGA1-204ENST00000401473 GTF2A2P52657 109 aa18.72■□□□□ 0.59
HMGA1-204ENST00000401473 WTAPQ15007 396 aa18.72■□□□□ 0.59
HMGA1-204ENST00000401473 CCDC178Q5BJE1 867 aa18.72■□□□□ 0.59
HMGA1-204ENST00000401473 Q6ZUG5 572 aa18.72■□□□□ 0.59
HMGA1-204ENST00000401473 RASGRP2Q7LDG7 609 aa18.72■□□□□ 0.59
HMGA1-204ENST00000401473 AGXT2Q9BYV1 514 aa18.72■□□□□ 0.59
HMGA1-204ENST00000401473 VCPKMTQ9H867 229 aa18.72■□□□□ 0.59
HMGA1-204ENST00000401473 ERICH2A1L162 156 aa18.71■□□□□ 0.59
HMGA1-204ENST00000401473 LIFRP42702 1097 aa18.71■□□□□ 0.59
HMGA1-204ENST00000401473 SART3Q15020 963 aaKnown RBP18.71■□□□□ 0.59
HMGA1-204ENST00000401473 TESPA1A2RU30 521 aaPredicted RBP18.71■□□□□ 0.59
HMGA1-204ENST00000401473 NEK4P51957 841 aa18.71■□□□□ 0.59
HMGA1-204ENST00000401473 TREML2Q5T2D2 321 aa18.71■□□□□ 0.59
HMGA1-204ENST00000401473 FBXL16Q8N461 479 aa18.71■□□□□ 0.59
HMGA1-204ENST00000401473 PNMA1Q8ND90 353 aa18.71■□□□□ 0.59
HMGA1-204ENST00000401473 CCL15-CCL14A0A0B4J2E2 113 aa18.7■□□□□ 0.58
HMGA1-204ENST00000401473 MANSC4A6NHS7 340 aaPredicted RBP18.7■□□□□ 0.58
HMGA1-204ENST00000401473 IGF2BP3O00425 579 aaKnown RBP eCLIP18.7■□□□□ 0.589e-9■■■■□ 21.5
HMGA1-204ENST00000401473 RAD21O60216 631 aa18.7■□□□□ 0.58
HMGA1-204ENST00000401473 NDUFB10O96000 172 aa18.7■□□□□ 0.58
HMGA1-204ENST00000401473 TM4SF4P48230 202 aa18.7■□□□□ 0.58
HMGA1-204ENST00000401473 TOB2Q14106 344 aaPredicted RBP18.7■□□□□ 0.58
HMGA1-204ENST00000401473 CCL15Q16663 113 aa18.7■□□□□ 0.58
HMGA1-204ENST00000401473 PPP4R3BQ5MIZ7 849 aa18.7■□□□□ 0.58
HMGA1-204ENST00000401473 GPAT2Q6NUI2 795 aa18.7■□□□□ 0.58
HMGA1-204ENST00000401473 USP17L2Q6R6M4 530 aa18.7■□□□□ 0.58
HMGA1-204ENST00000401473 C12orf42Q96LP6 360 aa18.7■□□□□ 0.58
HMGA1-204ENST00000401473 LARP6Q9BRS8 491 aaKnown RBP18.7■□□□□ 0.58
HMGA1-204ENST00000401473 BRPF3Q9ULD4 1205 aa18.7■□□□□ 0.58
HMGA1-204ENST00000401473 SYNPO2Q9UMS6 1093 aa18.7■□□□□ 0.58
HMGA1-204ENST00000401473 MTMR7Q9Y216 660 aa18.7■□□□□ 0.58
HMGA1-204ENST00000401473 THSD7BQ9C0I4 1608 aa18.7■□□□□ 0.58
HMGA1-204ENST00000401473 CETPP11597 493 aa18.69■□□□□ 0.58
HMGA1-204ENST00000401473 VCAM1P19320 739 aa18.69■□□□□ 0.58
HMGA1-204ENST00000401473 USP14P54578 494 aa18.69■□□□□ 0.58
HMGA1-204ENST00000401473 JMYQ8N9B5 988 aa18.69■□□□□ 0.58
HMGA1-204ENST00000401473 GMCL1P1Q8NEA9 526 aa18.69■□□□□ 0.58
HMGA1-204ENST00000401473 BRF1Q92994 677 aa18.69■□□□□ 0.58
HMGA1-204ENST00000401473 NUP88Q99567 741 aaPredicted RBP18.69■□□□□ 0.58
HMGA1-204ENST00000401473 SH2D4AQ9H788 454 aa18.69■□□□□ 0.58
HMGA1-204ENST00000401473 KAT14Q9H8E8 782 aa18.69■□□□□ 0.58
HMGA1-204ENST00000401473 PDRG1Q9NUG6 133 aa18.69■□□□□ 0.58
HMGA1-204ENST00000401473 BAZ2BQ9UIF8 2168 aaKnown RBP18.69■□□□□ 0.58
HMGA1-204ENST00000401473 BTBD19C9JJ37 291 aa18.69■□□□□ 0.58
HMGA1-204ENST00000401473 TROAPQ12815 778 aa18.69■□□□□ 0.58
HMGA1-204ENST00000401473 GADL1Q6ZQY3 521 aa18.69■□□□□ 0.58
HMGA1-204ENST00000401473 SGMS1Q86VZ5 419 aa18.69■□□□□ 0.58
HMGA1-204ENST00000401473 FAM43AQ8N2R8 423 aa18.69■□□□□ 0.58
HMGA1-204ENST00000401473 TMTC2Q8N394 836 aa18.69■□□□□ 0.58
HMGA1-204ENST00000401473 GOPCQ9HD26 462 aa18.69■□□□□ 0.58
HMGA1-204ENST00000401473 SLFN13Q68D06 897 aa18.68■□□□□ 0.58
HMGA1-204ENST00000401473 FASTKD5Q7L8L6 764 aaKnown RBP18.68■□□□□ 0.58
HMGA1-204ENST00000401473 IFNL1Q8IU54 200 aa18.68■□□□□ 0.58
HMGA1-204ENST00000401473 PROCA1Q8NCQ7 364 aaPredicted RBP18.68■□□□□ 0.58
HMGA1-204ENST00000401473 MYL10Q9BUA6 226 aa18.68■□□□□ 0.58
HMGA1-204ENST00000401473 TMOD4Q9NZQ9 345 aa18.68■□□□□ 0.58
HMGA1-204ENST00000401473 PDHBP11177 359 aa18.67■□□□□ 0.58
HMGA1-204ENST00000401473 INHBEP58166 350 aa18.67■□□□□ 0.58
HMGA1-204ENST00000401473 APOBRQ0VD83 1088 aa18.67■□□□□ 0.58
HMGA1-204ENST00000401473 LPAR1Q92633 364 aa18.67■□□□□ 0.58
HMGA1-204ENST00000401473 SNHG28P0DPA3 235 aa18.67■□□□□ 0.58
HMGA1-204ENST00000401473 FGD1P98174 961 aa18.67■□□□□ 0.58
HMGA1-204ENST00000401473 SREBF2Q12772 1141 aa18.67■□□□□ 0.58
HMGA1-204ENST00000401473 ALDH8A1Q9H2A2 487 aaPredicted RBP18.67■□□□□ 0.58
HMGA1-204ENST00000401473 AGTPBP1Q9UPW5 1226 aa18.67■□□□□ 0.58
HMGA1-204ENST00000401473 LOC285556D6RIA3 1793 aa18.66■□□□□ 0.58
HMGA1-204ENST00000401473 CENPFP49454 3210 aa18.66■□□□□ 0.58
HMGA1-204ENST00000401473 RXRAP19793 462 aa18.66■□□□□ 0.58
HMGA1-204ENST00000401473 AK2P54819 239 aa18.66■□□□□ 0.58
HMGA1-204ENST00000401473 FAM83BQ5T0W9 1011 aa18.66■□□□□ 0.58
HMGA1-204ENST00000401473 APOA5Q6Q788 366 aa18.66■□□□□ 0.58
HMGA1-204ENST00000401473 NFXL1Q6ZNB6 911 aa18.66■□□□□ 0.58
HMGA1-204ENST00000401473 RAB11FIP4Q86YS3 637 aa18.66■□□□□ 0.58
HMGA1-204ENST00000401473 ZNF654Q8IZM8 581 aa18.66■□□□□ 0.58
HMGA1-204ENST00000401473 GMCL1Q96IK5 515 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms