RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 ERCC3P19447 782 aa17.68■□□□□ 0.42
VAMP1-203ENST00000400911 SHHQ15465 462 aa17.68■□□□□ 0.42
VAMP1-203ENST00000400911 KIAA1755Q5JYT7 1200 aa17.68■□□□□ 0.42
VAMP1-203ENST00000400911 PRAMEF19Q5SWL8 479 aa17.68■□□□□ 0.42
VAMP1-203ENST00000400911 SLC39A5Q6ZMH5 540 aa17.68■□□□□ 0.42
VAMP1-203ENST00000400911 AACSQ86V21 672 aa17.68■□□□□ 0.42
VAMP1-203ENST00000400911 FTSJ3Q8IY81 847 aaKnown RBP17.68■□□□□ 0.42
VAMP1-203ENST00000400911 TANGO6Q9C0B7 1094 aa17.68■□□□□ 0.42
VAMP1-203ENST00000400911 MCM9Q9NXL9 1143 aa17.68■□□□□ 0.42
VAMP1-203ENST00000400911 CCER2I3L3R5 266 aa17.67■□□□□ 0.42
VAMP1-203ENST00000400911 SEPT4O43236 478 aa17.67■□□□□ 0.42
VAMP1-203ENST00000400911 RLBP1P12271 317 aa17.67■□□□□ 0.42
VAMP1-203ENST00000400911 C9orf50Q5SZB4 431 aa17.67■□□□□ 0.42
VAMP1-203ENST00000400911 ZNF697Q5TEC3 545 aa17.67■□□□□ 0.42
VAMP1-203ENST00000400911 TMED8Q6PL24 325 aaPredicted RBP17.67■□□□□ 0.42
VAMP1-203ENST00000400911 PRDM5Q9NQX1 630 aaPredicted RBP17.67■□□□□ 0.42
VAMP1-203ENST00000400911 CDH23Q9H251 3354 aa17.66■□□□□ 0.42
VAMP1-203ENST00000400911 MAST2Q6P0Q8 1798 aa17.66■□□□□ 0.42
VAMP1-203ENST00000400911 KBTBD13C9JR72 458 aa17.66■□□□□ 0.42
VAMP1-203ENST00000400911 PLS1Q14651 629 aa17.66■□□□□ 0.42
VAMP1-203ENST00000400911 TRIM60Q495X7 471 aa17.66■□□□□ 0.42
VAMP1-203ENST00000400911 SLC9C2Q5TAH2 1124 aa17.66■□□□□ 0.42
VAMP1-203ENST00000400911 SHCBP1Q8NEM2 672 aa17.66■□□□□ 0.42
VAMP1-203ENST00000400911 BADQ92934 168 aa17.66■□□□□ 0.42
VAMP1-203ENST00000400911 CRNKL1Q9BZJ0 848 aaKnown RBP17.66■□□□□ 0.42
VAMP1-203ENST00000400911 EXOC6BQ9Y2D4 811 aa17.66■□□□□ 0.42
VAMP1-203ENST00000400911 CUL9Q8IWT3 2517 aa17.66■□□□□ 0.42
VAMP1-203ENST00000400911 CYP2D6P10635 497 aa17.65■□□□□ 0.42
VAMP1-203ENST00000400911 PDE6AP16499 860 aa17.65■□□□□ 0.42
VAMP1-203ENST00000400911 ADCYAP1R1P41586 468 aa17.65■□□□□ 0.42
VAMP1-203ENST00000400911 CEP85Q6P2H3 762 aa17.65■□□□□ 0.42
VAMP1-203ENST00000400911 NCAPG2Q86XI2 1143 aa17.65■□□□□ 0.42
VAMP1-203ENST00000400911 SLC44A5Q8NCS7 719 aa17.65■□□□□ 0.42
VAMP1-203ENST00000400911 SDR42E1Q8WUS8 393 aa17.65■□□□□ 0.42
VAMP1-203ENST00000400911 FERMT2Q96AC1 680 aa17.65■□□□□ 0.42
VAMP1-203ENST00000400911 CDX2Q99626 313 aaPredicted RBP17.65■□□□□ 0.42
VAMP1-203ENST00000400911 SPTBN5Q9NRC6 3674 aaKnown RBP17.65■□□□□ 0.42
VAMP1-203ENST00000400911 FLOT1O75955 427 aa17.64■□□□□ 0.41
VAMP1-203ENST00000400911 DSG3P32926 999 aa17.64■□□□□ 0.41
VAMP1-203ENST00000400911 LRRC41Q15345 812 aa17.64■□□□□ 0.41
VAMP1-203ENST00000400911 TTF1Q15361 905 aaPredicted RBP17.64■□□□□ 0.41
VAMP1-203ENST00000400911 SAMD1Q6SPF0 538 aaPredicted RBP17.64■□□□□ 0.41
VAMP1-203ENST00000400911 TMEM179Q6ZVK1 233 aa17.64■□□□□ 0.41
VAMP1-203ENST00000400911 SH3RF1Q7Z6J0 888 aa17.64■□□□□ 0.41
VAMP1-203ENST00000400911 ERC1Q8IUD2 1116 aa17.64■□□□□ 0.41
VAMP1-203ENST00000400911 SIAH1Q8IUQ4 282 aa17.64■□□□□ 0.41
VAMP1-203ENST00000400911 SPICE1Q8N0Z3 855 aa17.64■□□□□ 0.41
VAMP1-203ENST00000400911 MB21D1Q8N884 522 aa17.64■□□□□ 0.41
VAMP1-203ENST00000400911 ATG4CQ96DT6 458 aa17.64■□□□□ 0.41
VAMP1-203ENST00000400911 DYNLL2Q96FJ2 89 aa17.64■□□□□ 0.41
VAMP1-203ENST00000400911 SEMA6BQ9H3T3 888 aa17.64■□□□□ 0.41
VAMP1-203ENST00000400911 MROH8Q9H579 483 aa17.64■□□□□ 0.41
VAMP1-203ENST00000400911 IL1RAPL2Q9NP60 686 aa17.64■□□□□ 0.41
VAMP1-203ENST00000400911 DCP1AQ9NPI6 582 aaPredicted RBP17.64■□□□□ 0.41
VAMP1-203ENST00000400911 SLC5A4Q9NY91 659 aa17.64■□□□□ 0.41
VAMP1-203ENST00000400911 PRUNE2Q8WUY3 3088 aa17.63■□□□□ 0.41
VAMP1-203ENST00000400911 TRIM43BA6NCK2 446 aa17.63■□□□□ 0.41
VAMP1-203ENST00000400911 SNX17Q15036 470 aa17.63■□□□□ 0.41
VAMP1-203ENST00000400911 CLEC10AQ8IUN9 316 aa17.63■□□□□ 0.41
VAMP1-203ENST00000400911 ABRAQ8N0Z2 381 aa17.63■□□□□ 0.41
VAMP1-203ENST00000400911 LCORLQ8N3X6 602 aa17.63■□□□□ 0.41
VAMP1-203ENST00000400911 TRIM43Q96BQ3 446 aaPredicted RBP17.63■□□□□ 0.41
VAMP1-203ENST00000400911 PDLIM7Q9NR12 457 aa17.63■□□□□ 0.41
VAMP1-203ENST00000400911 ZNF532Q9HCE3 1301 aa17.63■□□□□ 0.41
VAMP1-203ENST00000400911 TCRBV5S4A2TA0A5A2 114 aa17.62■□□□□ 0.41
VAMP1-203ENST00000400911 GOLIM4O00461 696 aa17.62■□□□□ 0.41
VAMP1-203ENST00000400911 FAM47AQ5JRC9 791 aa17.62■□□□□ 0.41
VAMP1-203ENST00000400911 MAML3Q96JK9 1138 aa17.62■□□□□ 0.41
VAMP1-203ENST00000400911 DNAJC2Q99543 621 aaKnown RBP17.62■□□□□ 0.41
VAMP1-203ENST00000400911 FCER1AP12319 257 aa17.61■□□□□ 0.41
VAMP1-203ENST00000400911 AKR1B1P15121 316 aa17.61■□□□□ 0.41
VAMP1-203ENST00000400911 TLE2Q04725 743 aa17.61■□□□□ 0.41
VAMP1-203ENST00000400911 TMEM132BQ14DG7 1078 aa17.61■□□□□ 0.41
VAMP1-203ENST00000400911 ARMT1Q9H993 441 aa17.61■□□□□ 0.41
VAMP1-203ENST00000400911 SWAP70Q9UH65 585 aa17.61■□□□□ 0.41
VAMP1-203ENST00000400911 TMX2Q9Y320 296 aa17.61■□□□□ 0.41
VAMP1-203ENST00000400911 FOCADQ5VW36 1801 aa17.61■□□□□ 0.41
VAMP1-203ENST00000400911 PRKAB2O43741 272 aa17.6■□□□□ 0.41
VAMP1-203ENST00000400911 ITGB8P26012 769 aa17.6■□□□□ 0.41
VAMP1-203ENST00000400911 ICA1Q05084 483 aa17.6■□□□□ 0.41
VAMP1-203ENST00000400911 SLFNL1Q499Z3 407 aa17.6■□□□□ 0.41
VAMP1-203ENST00000400911 C1orf53Q5VUE5 145 aa17.6■□□□□ 0.41
VAMP1-203ENST00000400911 MAFAQ8NHW3 353 aaPredicted RBP17.6■□□□□ 0.41
VAMP1-203ENST00000400911 RHPN1Q8TCX5 695 aa17.6■□□□□ 0.41
VAMP1-203ENST00000400911 BCL11AQ9H165 835 aa17.6■□□□□ 0.41
VAMP1-203ENST00000400911 TTYH1Q9H313 450 aaPredicted RBP17.6■□□□□ 0.41
VAMP1-203ENST00000400911 VCPKMTQ9H867 229 aa17.6■□□□□ 0.41
VAMP1-203ENST00000400911 ARHGEF10LQ9HCE6 1279 aa17.6■□□□□ 0.41
VAMP1-203ENST00000400911 CDK5RAP2Q96SN8 1893 aa17.59■□□□□ 0.41
VAMP1-203ENST00000400911 SMIM22K7EJ46 135 aa17.59■□□□□ 0.41
VAMP1-203ENST00000400911 APBB1O00213 710 aa17.59■□□□□ 0.41
VAMP1-203ENST00000400911 PGK2P07205 417 aa17.59■□□□□ 0.41
VAMP1-203ENST00000400911 SMAD3P84022 425 aaKnown RBP17.59■□□□□ 0.41
VAMP1-203ENST00000400911 HSP90AB4PQ58FF6 505 aa17.59■□□□□ 0.41
VAMP1-203ENST00000400911 MYLIPQ8WY64 445 aa17.59■□□□□ 0.41
VAMP1-203ENST00000400911 SH2D4AQ9H788 454 aa17.59■□□□□ 0.41
VAMP1-203ENST00000400911 XPNPEP3Q9NQH7 507 aa17.59■□□□□ 0.41
VAMP1-203ENST00000400911 TACC3Q9Y6A5 838 aa17.59■□□□□ 0.41
VAMP1-203ENST00000400911 CYP2D7A0A087X1C5 515 aa17.58■□□□□ 0.4
VAMP1-203ENST00000400911 WDR46O15213 610 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms