RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 PYM1Q9BRP8 204 aaKnown RBP12.3□□□□□ -0.44
LINC00649-202ENST00000400353 NAV1Q8NEY1 1877 aa12.29□□□□□ -0.44
LINC00649-202ENST00000400353 SMIM22K7EJ46 135 aa12.29□□□□□ -0.44
LINC00649-202ENST00000400353 NRDCO43847 1150 aa12.29□□□□□ -0.44
LINC00649-202ENST00000400353 HOXA10P31260 410 aaPredicted RBP12.29□□□□□ -0.44
LINC00649-202ENST00000400353 MDM2Q00987 491 aaPredicted RBP12.29□□□□□ -0.44
LINC00649-202ENST00000400353 PNOCQ13519 176 aa12.29□□□□□ -0.44
LINC00649-202ENST00000400353 NCAPHQ15003 741 aa12.29□□□□□ -0.44
LINC00649-202ENST00000400353 POSTNQ15063 836 aa12.29□□□□□ -0.44
LINC00649-202ENST00000400353 CCDC144BQ3MJ40 725 aa12.29□□□□□ -0.44
LINC00649-202ENST00000400353 FAM47AQ5JRC9 791 aa12.29□□□□□ -0.44
LINC00649-202ENST00000400353 NT5DC1Q5TFE4 455 aa12.29□□□□□ -0.44
LINC00649-202ENST00000400353 CACTINQ8WUQ7 758 aaKnown RBP12.29□□□□□ -0.44
LINC00649-202ENST00000400353 TNFRSF25Q93038 417 aa12.29□□□□□ -0.44
LINC00649-202ENST00000400353 FBXW7Q969H0 707 aa12.29□□□□□ -0.44
LINC00649-202ENST00000400353 LZTS2Q9BRK4 669 aa12.29□□□□□ -0.44
LINC00649-202ENST00000400353 MKNK2Q9HBH9 465 aa12.29□□□□□ -0.44
LINC00649-202ENST00000400353 CD209Q9NNX6 404 aa12.29□□□□□ -0.44
LINC00649-202ENST00000400353 A0A087WWV3 80 aa12.28□□□□□ -0.44
LINC00649-202ENST00000400353 UFL1O94874 794 aa12.28□□□□□ -0.44
LINC00649-202ENST00000400353 USP17L8P0C7I0 530 aa12.28□□□□□ -0.44
LINC00649-202ENST00000400353 TFAP4Q01664 338 aa12.28□□□□□ -0.44
LINC00649-202ENST00000400353 GRM4Q14833 912 aa12.28□□□□□ -0.44
LINC00649-202ENST00000400353 ZNF444Q8N0Y2 327 aaPredicted RBP12.28□□□□□ -0.44
LINC00649-202ENST00000400353 PROM2Q8N271 834 aa12.28□□□□□ -0.44
LINC00649-202ENST00000400353 SRBD1Q8N5C6 995 aaKnown RBP12.28□□□□□ -0.44
LINC00649-202ENST00000400353 MLKLQ8NB16 471 aa12.28□□□□□ -0.44
LINC00649-202ENST00000400353 SH3RF3Q8TEJ3 882 aaPredicted RBP12.28□□□□□ -0.44
LINC00649-202ENST00000400353 SMARCE1Q969G3 411 aa12.28□□□□□ -0.44
LINC00649-202ENST00000400353 PLCD4Q9BRC7 762 aa12.28□□□□□ -0.44
LINC00649-202ENST00000400353 SMC2O95347 1197 aa12.28□□□□□ -0.44
LINC00649-202ENST00000400353 IRX3P78415 501 aaPredicted RBP12.28□□□□□ -0.44
LINC00649-202ENST00000400353 LRMPQ12912 555 aa12.28□□□□□ -0.44
LINC00649-202ENST00000400353 TTC38Q5R3I4 469 aa12.28□□□□□ -0.44
LINC00649-202ENST00000400353 RCSD1Q6JBY9 416 aa12.28□□□□□ -0.44
LINC00649-202ENST00000400353 ILDR2Q71H61 639 aa12.28□□□□□ -0.44
LINC00649-202ENST00000400353 C17orf53Q8N3J3 647 aaPredicted RBP12.28□□□□□ -0.44
LINC00649-202ENST00000400353 ZNF622Q969S3 477 aaKnown RBP eCLIP12.28□□□□□ -0.44
LINC00649-202ENST00000400353 FAM163AQ96GL9 167 aaPredicted RBP12.28□□□□□ -0.44
LINC00649-202ENST00000400353 KCND1Q9NSA2 647 aa12.28□□□□□ -0.44
LINC00649-202ENST00000400353 PCDHA5Q9Y5H7 936 aa12.28□□□□□ -0.44
LINC00649-202ENST00000400353 LRRC37AA6NMS7 1700 aa12.27□□□□□ -0.44
LINC00649-202ENST00000400353 GPR75-ASB3A0A0A6YYF3 556 aa12.27□□□□□ -0.45
LINC00649-202ENST00000400353 POLR2DO15514 142 aaKnown RBP12.27□□□□□ -0.45
LINC00649-202ENST00000400353 GTF2F1P35269 517 aaKnown RBP eCLIP12.27□□□□□ -0.45
LINC00649-202ENST00000400353 NLRP5P59047 1200 aa12.27□□□□□ -0.45
LINC00649-202ENST00000400353 FANCCQ00597 558 aa12.27□□□□□ -0.45
LINC00649-202ENST00000400353 GALNT17Q6IS24 598 aa12.27□□□□□ -0.45
LINC00649-202ENST00000400353 SHISA4Q96DD7 197 aa12.27□□□□□ -0.45
LINC00649-202ENST00000400353 MAP7D2Q96T17 732 aa12.27□□□□□ -0.45
LINC00649-202ENST00000400353 RTFDC1Q9BY42 306 aaPredicted RBP12.27□□□□□ -0.45
LINC00649-202ENST00000400353 CSRNP2Q9H175 543 aa12.27□□□□□ -0.45
LINC00649-202ENST00000400353 IFNKQ9P0W0 207 aa12.27□□□□□ -0.45
LINC00649-202ENST00000400353 SERTAD1Q9UHV2 236 aa12.27□□□□□ -0.45
LINC00649-202ENST00000400353 GOLGB1Q14789 3259 aaKnown RBP12.27□□□□□ -0.45
LINC00649-202ENST00000400353 SRCAPQ6ZRS2 3230 aa12.27□□□□□ -0.45
LINC00649-202ENST00000400353 KLRG2A4D1S0 409 aaPredicted RBP12.26□□□□□ -0.45
LINC00649-202ENST00000400353 ACTN4O43707 911 aaKnown RBP12.26□□□□□ -0.45
LINC00649-202ENST00000400353 TSPY3P0CV98 308 aa12.26□□□□□ -0.45
LINC00649-202ENST00000400353 TSPY8P0CW00 308 aa12.26□□□□□ -0.45
LINC00649-202ENST00000400353 SARSP49591 514 aaKnown RBP12.26□□□□□ -0.45
LINC00649-202ENST00000400353 TXNRD1Q16881 649 aa12.26□□□□□ -0.45
LINC00649-202ENST00000400353 MTERF4Q7Z6M4 381 aaKnown RBP12.26□□□□□ -0.45
LINC00649-202ENST00000400353 PNMA1Q8ND90 353 aa12.26□□□□□ -0.45
LINC00649-202ENST00000400353 CCDC148Q8NFR7 591 aa12.26□□□□□ -0.45
LINC00649-202ENST00000400353 XPO4Q9C0E2 1151 aaKnown RBP12.26□□□□□ -0.45
LINC00649-202ENST00000400353 MAN1B1Q9UKM7 699 aa12.26□□□□□ -0.45
LINC00649-202ENST00000400353 JAG2Q9Y219 1238 aa12.26□□□□□ -0.45
LINC00649-202ENST00000400353 NMT2O60551 498 aa12.26□□□□□ -0.45
LINC00649-202ENST00000400353 ATP2B1P20020 1258 aa12.26□□□□□ -0.45
LINC00649-202ENST00000400353 BTDP43251 543 aa12.26□□□□□ -0.45
LINC00649-202ENST00000400353 KCNJ6P48051 423 aa12.26□□□□□ -0.45
LINC00649-202ENST00000400353 ATP2C1P98194 919 aaPredicted RBP12.26□□□□□ -0.45
LINC00649-202ENST00000400353 MORC3Q14149 939 aa12.26□□□□□ -0.45
LINC00649-202ENST00000400353 TGFBRAP1Q8WUH2 860 aa12.26□□□□□ -0.45
LINC00649-202ENST00000400353 SUGT1Q9Y2Z0 365 aa12.26□□□□□ -0.45
LINC00649-202ENST00000400353 FAM205AQ6ZU69 1335 aa12.26□□□□□ -0.45
LINC00649-202ENST00000400353 GRIN1Q05586 938 aa12.25□□□□□ -0.45
LINC00649-202ENST00000400353 NPY5RQ15761 445 aa12.25□□□□□ -0.45
LINC00649-202ENST00000400353 FILIP1Q7Z7B0 1213 aa12.25□□□□□ -0.45
LINC00649-202ENST00000400353 SP8Q8IXZ3 490 aa12.25□□□□□ -0.45
LINC00649-202ENST00000400353 TEX11Q8IYF3 940 aa12.25□□□□□ -0.45
LINC00649-202ENST00000400353 DAGLBQ8NCG7 672 aa12.25□□□□□ -0.45
LINC00649-202ENST00000400353 GAKO14976 1311 aa12.25□□□□□ -0.45
LINC00649-202ENST00000400353 KIF2AO00139 706 aaPredicted RBP12.25□□□□□ -0.45
LINC00649-202ENST00000400353 POLRMTO00411 1230 aaKnown RBP12.25□□□□□ -0.45
LINC00649-202ENST00000400353 SLFN14P0C7P3 912 aa12.25□□□□□ -0.45
LINC00649-202ENST00000400353 SKILP12757 684 aa12.25□□□□□ -0.45
LINC00649-202ENST00000400353 CCZ1BP86790 482 aa12.25□□□□□ -0.45
LINC00649-202ENST00000400353 CCZ1P86791 482 aaPredicted RBP12.25□□□□□ -0.45
LINC00649-202ENST00000400353 DIXDC1Q155Q3 683 aa12.25□□□□□ -0.45
LINC00649-202ENST00000400353 TPD52L1Q16890 204 aaPredicted RBP12.25□□□□□ -0.45
LINC00649-202ENST00000400353 SPECC1Q5M775 1068 aa12.25□□□□□ -0.45
LINC00649-202ENST00000400353 ARL6IP4Q66PJ3 421 aaKnown RBP12.25□□□□□ -0.45
LINC00649-202ENST00000400353 FAM43BQ6ZT52 329 aaPredicted RBP12.25□□□□□ -0.45
LINC00649-202ENST00000400353 C16orf86Q6ZW13 317 aa12.25□□□□□ -0.45
LINC00649-202ENST00000400353 TMC6Q7Z403 805 aa12.25□□□□□ -0.45
LINC00649-202ENST00000400353 FOXP4Q8IVH2 680 aaPredicted RBP12.25□□□□□ -0.45
LINC00649-202ENST00000400353 BLIDQ8IZY5 108 aa12.25□□□□□ -0.45
LINC00649-202ENST00000400353 SPATA20Q8TB22 786 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms