RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 LIG4P49917 911 aa12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 GSDMDP57764 484 aa12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 RAD51AP2Q09MP3 1159 aa12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 CERS3Q8IU89 383 aa12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 C16orf45Q96MC5 204 aaPredicted RBP12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 OGFRQ9NZT2 677 aa12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 FRMPD2Q68DX3 1309 aaPredicted RBP12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 RABEP2Q9H5N1 569 aa12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 CC2D2BQ6DHV5 1058 aa12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 RINLQ6ZS11 566 aa12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 PNMA8AQ86V59 439 aaPredicted RBP12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 KCTD17Q8N5Z5 321 aa12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 NECAB1Q8N987 351 aa12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 METTL14Q9HCE5 456 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 PIM2Q9P1W9 311 aa12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 GAS7O60861 476 aa12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 PALM2Q8IXS6 379 aa12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 TRMT2AQ8IZ69 625 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 GDAP1Q8TB36 358 aa12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 KCNG4Q8TDN1 519 aa12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 MTRQ99707 1265 aa12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 MMTAG2Q9BU76 263 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 ANTXR1Q9H6X2 564 aa12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 KCNJ6P48051 423 aa12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 MCF2L2Q86YR7 1114 aa12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 WDR48Q8TAF3 677 aa12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 TRIM56Q9BRZ2 755 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 PFDN6O15212 129 aa12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 RHPN1Q8TCX5 695 aa12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 DBNDD1Q9H9R9 158 aa12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 SPON1Q9HCB6 807 aa12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 NRBP2Q9NSY0 501 aa12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 KIF28PB7ZC32 967 aa12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 KRT10P13645 584 aa12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 RUFY3Q7L099 469 aa12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 TCEANC2Q96MN5 208 aa12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 CSRNP2Q9H175 543 aa12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 CPSF3Q9UKF6 684 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-216ENST00000399638 CLUL1Q15846 466 aa12.11□□□□□ -0.47
CACNA1C-216ENST00000399638 GLT8D2Q9H1C3 349 aa12.11□□□□□ -0.47
CACNA1C-216ENST00000399638 ARHGEF10O15013 1369 aa12.11□□□□□ -0.47
CACNA1C-216ENST00000399638 MX2P20592 715 aa12.11□□□□□ -0.47
CACNA1C-216ENST00000399638 EHBP1Q8NDI1 1231 aa12.11□□□□□ -0.47
CACNA1C-216ENST00000399638 CTAGE1Q96RT6 745 aa12.11□□□□□ -0.47
CACNA1C-216ENST00000399638 DNM3Q9UQ16 869 aa12.11□□□□□ -0.47
CACNA1C-216ENST00000399638 UBXN1Q04323 297 aa12.11□□□□□ -0.47
CACNA1C-216ENST00000399638 XKR9Q5GH70 373 aa12.11□□□□□ -0.47
CACNA1C-216ENST00000399638 ZSCAN16Q9H4T2 348 aaPredicted RBP12.11□□□□□ -0.47
CACNA1C-216ENST00000399638 ANAPC5Q9UJX4 755 aa12.11□□□□□ -0.47
CACNA1C-216ENST00000399638 MTUS1Q9ULD2 1270 aa12.11□□□□□ -0.47
CACNA1C-216ENST00000399638 A1BGP04217 495 aa12.11□□□□□ -0.47
CACNA1C-216ENST00000399638 ATP2A3Q93084 1043 aa12.11□□□□□ -0.47
CACNA1C-216ENST00000399638 MRPL44Q9H9J2 332 aaKnown RBP12.11□□□□□ -0.47
CACNA1C-216ENST00000399638 MRPL11Q9Y3B7 192 aaKnown RBP12.11□□□□□ -0.47
CACNA1C-216ENST00000399638 S100BP04271 92 aaPredicted RBP12.11□□□□□ -0.47
CACNA1C-216ENST00000399638 UBXN2AP68543 259 aa12.11□□□□□ -0.47
CACNA1C-216ENST00000399638 MFSD14CQ5VZR4 134 aa12.11□□□□□ -0.47
CACNA1C-216ENST00000399638 CIAPIN1Q6FI81 312 aa12.11□□□□□ -0.47
CACNA1C-216ENST00000399638 CCDC110Q8TBZ0 833 aa12.11□□□□□ -0.47
CACNA1C-216ENST00000399638 POMGNT1Q8WZA1 660 aa12.11□□□□□ -0.47
CACNA1C-216ENST00000399638 CAPZA3Q96KX2 299 aa12.11□□□□□ -0.47
CACNA1C-216ENST00000399638 VWA3AA6NCI4 1184 aa12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 LRRIQ4A6NIV6 560 aa12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 PRDM1O75626 825 aa12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 POLR2MP0CAP2 368 aa12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 LRRC23Q53EV4 343 aaPredicted RBP12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 SEPT12Q8IYM1 358 aa12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 NUF2Q9BZD4 464 aa12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 CCDC68Q9H2F9 335 aa12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 BICC1Q9H694 974 aaKnown RBP12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 XPOTO43592 962 aaKnown RBP12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 TFDP1Q14186 410 aa12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 RMDN2Q96LZ7 410 aa12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 ZNF521Q96K83 1311 aa12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 CTAGE6Q86UF2 777 aa12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 SEPT9Q9UHD8 586 aaPredicted RBP12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 EIF4E1BA6NMX2 242 aaKnown RBP12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 ALDH1L1O75891 902 aa12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 CASP2P42575 452 aa12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 USPL1Q5W0Q7 1092 aa12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 PIK3AP1Q6ZUJ8 805 aa12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 IFNLR1Q8IU57 520 aaPredicted RBP12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 ZNF594Q96JF6 807 aaPredicted RBP12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 SLC12A6Q9UHW9 1150 aa12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 DUOX2Q9NRD8 1548 aa12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 ASXL2Q76L83 1435 aa12.1□□□□□ -0.47
CACNA1C-216ENST00000399638 ADCY5O95622 1261 aa12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 BRD3Q15059 726 aa12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 GKAP1Q5VSY0 366 aaPredicted RBP12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 DNAJC10Q8IXB1 793 aa12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 NME8Q8N427 588 aa12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 SRPK1Q96SB4 655 aaKnown RBP12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 NSRP1Q9H0G5 558 aaKnown RBP12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 ZNF215Q9UL58 517 aaPredicted RBP12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 THRAP3Q9Y2W1 955 aaKnown RBP12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 CIB2O75838 187 aa12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 USP14P54578 494 aa12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 STX17P56962 302 aa12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 NEMP1O14524 444 aa12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 EXOC3O60645 756 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms