RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 FCF1Q9Y324 198 aaKnown RBP14.28□□□□□ -0.12
SMIM11A-201ENST00000399292 FLT1P17948 1338 aa14.27□□□□□ -0.12
SMIM11A-201ENST00000399292 FAM196BA6NMK8 535 aa14.27□□□□□ -0.13
SMIM11A-201ENST00000399292 GOLIM4O00461 696 aa14.27□□□□□ -0.13
SMIM11A-201ENST00000399292 CD46P15529 392 aa14.27□□□□□ -0.13
SMIM11A-201ENST00000399292 ATP5JP18859 108 aa14.27□□□□□ -0.13
SMIM11A-201ENST00000399292 USP5P45974 858 aa14.27□□□□□ -0.13
SMIM11A-201ENST00000399292 SLC9C2Q5TAH2 1124 aa14.27□□□□□ -0.13
SMIM11A-201ENST00000399292 ZNF787Q6DD87 383 aa14.27□□□□□ -0.13
SMIM11A-201ENST00000399292 ANKRD23Q86SG2 305 aa14.27□□□□□ -0.13
SMIM11A-201ENST00000399292 FOXP4Q8IVH2 680 aaPredicted RBP14.27□□□□□ -0.13
SMIM11A-201ENST00000399292 BOLA2Q9H3K6 86 aa14.27□□□□□ -0.13
SMIM11A-201ENST00000399292 OTOFQ9HC10 1997 aa14.27□□□□□ -0.13
SMIM11A-201ENST00000399292 AK9Q5TCS8 1911 aa14.27□□□□□ -0.13
SMIM11A-201ENST00000399292 COL2A1P02458 1487 aaPredicted RBP14.26□□□□□ -0.13
SMIM11A-201ENST00000399292 PDHXO00330 501 aa14.26□□□□□ -0.13
SMIM11A-201ENST00000399292 SMARCA5O60264 1052 aaPredicted RBP14.26□□□□□ -0.13
SMIM11A-201ENST00000399292 TLR2O60603 784 aa14.26□□□□□ -0.13
SMIM11A-201ENST00000399292 ARHGEF6Q15052 776 aa14.26□□□□□ -0.13
SMIM11A-201ENST00000399292 FBXO46Q6PJ61 603 aaPredicted RBP14.26□□□□□ -0.13
SMIM11A-201ENST00000399292 FASTKD5Q7L8L6 764 aaKnown RBP14.26□□□□□ -0.13
SMIM11A-201ENST00000399292 PAG1Q9NWQ8 432 aa14.26□□□□□ -0.13
SMIM11A-201ENST00000399292 PALD1Q9ULE6 856 aa14.26□□□□□ -0.13
SMIM11A-201ENST00000399292 AFG3L2Q9Y4W6 797 aa14.26□□□□□ -0.13
SMIM11A-201ENST00000399292 TRIM17Q9Y577 477 aa14.26□□□□□ -0.13
SMIM11A-201ENST00000399292 MAGEB6P1A0A0J9YX57 407 aa14.25□□□□□ -0.13
SMIM11A-201ENST00000399292 HLA-DOAP06340 250 aa14.25□□□□□ -0.13
SMIM11A-201ENST00000399292 PDE6AP16499 860 aa14.25□□□□□ -0.13
SMIM11A-201ENST00000399292 CAP2P40123 477 aa14.25□□□□□ -0.13
SMIM11A-201ENST00000399292 RGS19P49795 217 aa14.25□□□□□ -0.13
SMIM11A-201ENST00000399292 MOGSQ13724 837 aa14.25□□□□□ -0.13
SMIM11A-201ENST00000399292 CRACR2BQ8N4Y2 399 aaPredicted RBP14.25□□□□□ -0.13
SMIM11A-201ENST00000399292 CD99L2Q8TCZ2 262 aa14.25□□□□□ -0.13
SMIM11A-201ENST00000399292 HAUS7Q99871 368 aa14.25□□□□□ -0.13
SMIM11A-201ENST00000399292 TRIM34Q9BYJ4 488 aa14.25□□□□□ -0.13
SMIM11A-201ENST00000399292 SAP30BPQ9UHR5 308 aaKnown RBP14.25□□□□□ -0.13
SMIM11A-201ENST00000399292 PCDHB15Q9Y5E8 787 aa14.25□□□□□ -0.13
SMIM11A-201ENST00000399292 ZNF532Q9HCE3 1301 aa14.24□□□□□ -0.13
SMIM11A-201ENST00000399292 A0A0G2JLL6 359 aaPredicted RBP14.24□□□□□ -0.13
SMIM11A-201ENST00000399292 MSS51Q4VC12 460 aa14.24□□□□□ -0.13
SMIM11A-201ENST00000399292 GPAT2Q6NUI2 795 aa14.24□□□□□ -0.13
SMIM11A-201ENST00000399292 RNF19BQ6ZMZ0 732 aa14.24□□□□□ -0.13
SMIM11A-201ENST00000399292 OTOP1Q7RTM1 612 aa14.24□□□□□ -0.13
SMIM11A-201ENST00000399292 PRRT2Q7Z6L0 340 aaPredicted RBP14.24□□□□□ -0.13
SMIM11A-201ENST00000399292 METTL16Q86W50 562 aaKnown RBP14.24□□□□□ -0.13
SMIM11A-201ENST00000399292 EDC3Q96F86 508 aaKnown RBP14.24□□□□□ -0.13
SMIM11A-201ENST00000399292 RIOK1Q9BRS2 568 aaKnown RBP14.24□□□□□ -0.13
SMIM11A-201ENST00000399292 EFCC1Q9HA90 598 aa14.24□□□□□ -0.13
SMIM11A-201ENST00000399292 PRDM9Q9NQV7 894 aa14.24□□□□□ -0.13
SMIM11A-201ENST00000399292 FAM187AA6NFU0 413 aa14.23□□□□□ -0.13
SMIM11A-201ENST00000399292 TRIM75PA6NK02 468 aa14.23□□□□□ -0.13
SMIM11A-201ENST00000399292 RRP1BQ14684 758 aaKnown RBP14.23□□□□□ -0.13
SMIM11A-201ENST00000399292 KIF22Q14807 665 aa14.23□□□□□ -0.13
SMIM11A-201ENST00000399292 GADL1Q6ZQY3 521 aa14.23□□□□□ -0.13
SMIM11A-201ENST00000399292 GPATCH3Q96I76 525 aa14.23□□□□□ -0.13
SMIM11A-201ENST00000399292 TBC1D2Q9BYX2 928 aa14.23□□□□□ -0.13
SMIM11A-201ENST00000399292 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.23□□□□□ -0.13
SMIM11A-201ENST00000399292 ECHDC1Q9NTX5 307 aa14.23□□□□□ -0.13
SMIM11A-201ENST00000399292 PKD2L1Q9P0L9 805 aa14.23□□□□□ -0.13
SMIM11A-201ENST00000399292 HTTP42858 3142 aa14.23□□□□□ -0.13
SMIM11A-201ENST00000399292 CENPFP49454 3210 aa14.22□□□□□ -0.13
SMIM11A-201ENST00000399292 TCRBV5S4A2TA0A5A2 114 aa14.22□□□□□ -0.13
SMIM11A-201ENST00000399292 USP17L5A8MUK1 530 aa14.22□□□□□ -0.13
SMIM11A-201ENST00000399292 SPP2Q13103 211 aa14.22□□□□□ -0.13
SMIM11A-201ENST00000399292 C17orf99Q6UX52 265 aa14.22□□□□□ -0.13
SMIM11A-201ENST00000399292 TTC6Q86TZ1 520 aa14.22□□□□□ -0.13
SMIM11A-201ENST00000399292 CCDC84Q86UT8 332 aaPredicted RBP14.22□□□□□ -0.13
SMIM11A-201ENST00000399292 ZNF280CQ8ND82 737 aa14.22□□□□□ -0.13
SMIM11A-201ENST00000399292 CRBNQ96SW2 442 aa14.22□□□□□ -0.13
SMIM11A-201ENST00000399292 CRNKL1Q9BZJ0 848 aaKnown RBP14.22□□□□□ -0.13
SMIM11A-201ENST00000399292 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.22□□□□□ -0.13
SMIM11A-201ENST00000399292 PTPN22Q9Y2R2 807 aa14.22□□□□□ -0.13
SMIM11A-201ENST00000399292 LAMB1P07942 1786 aa14.22□□□□□ -0.13
SMIM11A-201ENST00000399292 ASNSP08243 561 aa14.21□□□□□ -0.13
SMIM11A-201ENST00000399292 MDM2Q00987 491 aaPredicted RBP14.21□□□□□ -0.13
SMIM11A-201ENST00000399292 SLC4A8Q2Y0W8 1093 aa14.21□□□□□ -0.13
SMIM11A-201ENST00000399292 Q3C1V9 767 aa14.21□□□□□ -0.13
SMIM11A-201ENST00000399292 ZSCAN25Q6NSZ9 544 aa14.21□□□□□ -0.13
SMIM11A-201ENST00000399292 PARK7Q99497 189 aaKnown RBP14.21□□□□□ -0.13
SMIM11A-201ENST00000399292 AS3MTQ9HBK9 375 aa14.21□□□□□ -0.13
SMIM11A-201ENST00000399292 GINM1Q9NU53 330 aa14.21□□□□□ -0.13
SMIM11A-201ENST00000399292 CPA4Q9UI42 421 aa14.21□□□□□ -0.13
SMIM11A-201ENST00000399292 TNRC18O15417 2968 aaPredicted RBP14.2□□□□□ -0.14
SMIM11A-201ENST00000399292 CD2BP2O95400 341 aaKnown RBP14.2□□□□□ -0.14
SMIM11A-201ENST00000399292 POLR3DP05423 398 aaPredicted RBP14.2□□□□□ -0.14
SMIM11A-201ENST00000399292 CYP2C8P10632 490 aa14.2□□□□□ -0.14
SMIM11A-201ENST00000399292 ADD2P35612 726 aa14.2□□□□□ -0.14
SMIM11A-201ENST00000399292 LACTBP83111 547 aaPredicted RBP14.2□□□□□ -0.14
SMIM11A-201ENST00000399292 FOXC1Q12948 553 aa14.2□□□□□ -0.14
SMIM11A-201ENST00000399292 WDR18Q9BV38 432 aa14.2□□□□□ -0.14
SMIM11A-201ENST00000399292 DNAJC18Q9H819 358 aa14.2□□□□□ -0.14
SMIM11A-201ENST00000399292 SERPINB13Q9UIV8 391 aa14.2□□□□□ -0.14
SMIM11A-201ENST00000399292 SLC45A1Q9Y2W3 748 aa14.2□□□□□ -0.14
SMIM11A-201ENST00000399292 DOCK2Q92608 1830 aa14.2□□□□□ -0.14
SMIM11A-201ENST00000399292 MAST2Q6P0Q8 1798 aa14.19□□□□□ -0.14
SMIM11A-201ENST00000399292 KDM4AO75164 1064 aa14.19□□□□□ -0.14
SMIM11A-201ENST00000399292 GNRH1P01148 92 aa14.19□□□□□ -0.14
SMIM11A-201ENST00000399292 CAP1Q01518 475 aa14.19□□□□□ -0.14
SMIM11A-201ENST00000399292 MLLT1Q03111 559 aaPredicted RBP14.19□□□□□ -0.14
SMIM11A-201ENST00000399292 UBE3CQ15386 1083 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms