RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 ATP2B2Q01814 1243 aa14.63□□□□□ -0.07
HLA-DQB1-203ENST00000399082 TRDNQ13061 729 aa14.63□□□□□ -0.07
HLA-DQB1-203ENST00000399082 TREML2Q5T2D2 321 aa14.63□□□□□ -0.07
HLA-DQB1-203ENST00000399082 RASGRP2Q7LDG7 609 aa14.63□□□□□ -0.07
HLA-DQB1-203ENST00000399082 RALYLQ86SE5 291 aaKnown RBP14.63□□□□□ -0.07
HLA-DQB1-203ENST00000399082 LRRC47Q8N1G4 583 aaKnown RBP14.63□□□□□ -0.07
HLA-DQB1-203ENST00000399082 FAM43AQ8N2R8 423 aa14.63□□□□□ -0.07
HLA-DQB1-203ENST00000399082 NEK1Q96PY6 1258 aa14.63□□□□□ -0.07
HLA-DQB1-203ENST00000399082 ZSCAN10Q96SZ4 725 aaPredicted RBP14.63□□□□□ -0.07
HLA-DQB1-203ENST00000399082 TMEM47Q9BQJ4 181 aa14.63□□□□□ -0.07
HLA-DQB1-203ENST00000399082 VCPKMTQ9H867 229 aa14.63□□□□□ -0.07
HLA-DQB1-203ENST00000399082 ARHGEF10LQ9HCE6 1279 aa14.63□□□□□ -0.07
HLA-DQB1-203ENST00000399082 PARP14Q460N5 1801 aa14.63□□□□□ -0.07
HLA-DQB1-203ENST00000399082 RLFQ13129 1914 aa14.62□□□□□ -0.07
HLA-DQB1-203ENST00000399082 C19orf81C9J6K1 198 aa14.62□□□□□ -0.07
HLA-DQB1-203ENST00000399082 PRC1O43663 620 aa14.62□□□□□ -0.07
HLA-DQB1-203ENST00000399082 KRT32Q14532 448 aa14.62□□□□□ -0.07
HLA-DQB1-203ENST00000399082 USP17L2Q6R6M4 530 aa14.62□□□□□ -0.07
HLA-DQB1-203ENST00000399082 DGKHQ86XP1 1220 aa14.62□□□□□ -0.07
HLA-DQB1-203ENST00000399082 IFNL1Q8IU54 200 aa14.62□□□□□ -0.07
HLA-DQB1-203ENST00000399082 JMYQ8N9B5 988 aa14.62□□□□□ -0.07
HLA-DQB1-203ENST00000399082 IGDCC4Q8TDY8 1250 aa14.62□□□□□ -0.07
HLA-DQB1-203ENST00000399082 ANKS1AQ92625 1134 aa14.62□□□□□ -0.07
HLA-DQB1-203ENST00000399082 TCEANC2Q96MN5 208 aa14.62□□□□□ -0.07
HLA-DQB1-203ENST00000399082 JAKMIP1Q96N16 626 aaKnown RBP14.62□□□□□ -0.07
HLA-DQB1-203ENST00000399082 FEZ1Q99689 392 aa14.62□□□□□ -0.07
HLA-DQB1-203ENST00000399082 STX8Q9UNK0 236 aa14.62□□□□□ -0.07
HLA-DQB1-203ENST00000399082 NDUFB10O96000 172 aa14.61□□□□□ -0.07
HLA-DQB1-203ENST00000399082 VCAM1P19320 739 aa14.61□□□□□ -0.07
HLA-DQB1-203ENST00000399082 GADL1Q6ZQY3 521 aa14.61□□□□□ -0.07
HLA-DQB1-203ENST00000399082 IQCA1Q86XH1 822 aa14.61□□□□□ -0.07
HLA-DQB1-203ENST00000399082 PROCA1Q8NCQ7 364 aaPredicted RBP14.61□□□□□ -0.07
HLA-DQB1-203ENST00000399082 KIF2CQ99661 725 aa14.61□□□□□ -0.07
HLA-DQB1-203ENST00000399082 LRRC2Q9BYS8 371 aa14.61□□□□□ -0.07
HLA-DQB1-203ENST00000399082 SYNPO2Q9UMS6 1093 aa14.61□□□□□ -0.07
HLA-DQB1-203ENST00000399082 AGTPBP1Q9UPW5 1226 aa14.61□□□□□ -0.07
HLA-DQB1-203ENST00000399082 F5H6K3 240 aa14.6□□□□□ -0.07
HLA-DQB1-203ENST00000399082 SH2B2O14492 632 aaPredicted RBP14.6□□□□□ -0.07
HLA-DQB1-203ENST00000399082 TOP1P11387 765 aaKnown RBP14.6□□□□□ -0.07
HLA-DQB1-203ENST00000399082 MCCP23508 829 aa14.6□□□□□ -0.07
HLA-DQB1-203ENST00000399082 MCM5P33992 734 aa14.6□□□□□ -0.07
HLA-DQB1-203ENST00000399082 RBM25P49756 843 aaKnown RBP14.6□□□□□ -0.07
HLA-DQB1-203ENST00000399082 ANAPC15P60006 121 aa14.6□□□□□ -0.07
HLA-DQB1-203ENST00000399082 KLRC3Q07444 240 aa14.6□□□□□ -0.07
HLA-DQB1-203ENST00000399082 SREBF2Q12772 1141 aa14.6□□□□□ -0.07
HLA-DQB1-203ENST00000399082 DHX32Q7L7V1 743 aaKnown RBP14.6□□□□□ -0.07
HLA-DQB1-203ENST00000399082 ANKRD23Q86SG2 305 aa14.6□□□□□ -0.07
HLA-DQB1-203ENST00000399082 SPICE1Q8N0Z3 855 aa14.6□□□□□ -0.07
HLA-DQB1-203ENST00000399082 GMCL1P1Q8NEA9 526 aa14.6□□□□□ -0.07
HLA-DQB1-203ENST00000399082 TTC14Q96N46 770 aa14.6□□□□□ -0.07
HLA-DQB1-203ENST00000399082 NUP88Q99567 741 aaPredicted RBP14.6□□□□□ -0.07
HLA-DQB1-203ENST00000399082 UBAC1Q9BSL1 405 aa14.6□□□□□ -0.07
HLA-DQB1-203ENST00000399082 TM6SF1Q9BZW5 370 aa14.6□□□□□ -0.07
HLA-DQB1-203ENST00000399082 LY9Q9HBG7 655 aa14.6□□□□□ -0.07
HLA-DQB1-203ENST00000399082 ZSWIM6Q9HCJ5 1215 aa14.6□□□□□ -0.07
HLA-DQB1-203ENST00000399082 WDR19Q8NEZ3 1342 aa14.6□□□□□ -0.07
HLA-DQB1-203ENST00000399082 PCNTO95613 3336 aa14.59□□□□□ -0.07
HLA-DQB1-203ENST00000399082 IFIT3O14879 490 aaKnown RBP14.59□□□□□ -0.07
HLA-DQB1-203ENST00000399082 EIF5BO60841 1220 aaKnown RBP14.59□□□□□ -0.07
HLA-DQB1-203ENST00000399082 CASTP20810 708 aaKnown RBP14.59□□□□□ -0.07
HLA-DQB1-203ENST00000399082 RPS6KB1P23443 525 aa14.59□□□□□ -0.07
HLA-DQB1-203ENST00000399082 USP14P54578 494 aa14.59□□□□□ -0.07
HLA-DQB1-203ENST00000399082 INHBEP58166 350 aa14.59□□□□□ -0.07
HLA-DQB1-203ENST00000399082 POTEEQ6S8J3 1075 aa14.59□□□□□ -0.07
HLA-DQB1-203ENST00000399082 FASTKD5Q7L8L6 764 aaKnown RBP14.59□□□□□ -0.07
HLA-DQB1-203ENST00000399082 MTA3Q9BTC8 594 aa14.59□□□□□ -0.07
HLA-DQB1-203ENST00000399082 UPF3BQ9BZI7 483 aaKnown RBP14.59□□□□□ -0.07
HLA-DQB1-203ENST00000399082 R3HDMLQ9H3Y0 253 aa14.59□□□□□ -0.07
HLA-DQB1-203ENST00000399082 SH2D4AQ9H788 454 aa14.59□□□□□ -0.07
HLA-DQB1-203ENST00000399082 ADGRA2Q96PE1 1338 aa14.59□□□□□ -0.07
HLA-DQB1-203ENST00000399082 A0A0G2JMZ2 1700 aa14.58□□□□□ -0.07
HLA-DQB1-203ENST00000399082 PDHXO00330 501 aa14.58□□□□□ -0.08
HLA-DQB1-203ENST00000399082 SNHG28P0DPA3 235 aa14.58□□□□□ -0.08
HLA-DQB1-203ENST00000399082 HOXA7P31268 230 aaPredicted RBP14.58□□□□□ -0.08
HLA-DQB1-203ENST00000399082 CCDC178Q5BJE1 867 aa14.58□□□□□ -0.08
HLA-DQB1-203ENST00000399082 TMEM67Q5HYA8 995 aa14.58□□□□□ -0.08
HLA-DQB1-203ENST00000399082 PPP4R3BQ5MIZ7 849 aa14.58□□□□□ -0.08
HLA-DQB1-203ENST00000399082 SLFN13Q68D06 897 aa14.58□□□□□ -0.08
HLA-DQB1-203ENST00000399082 BLOC1S2Q6QNY1 142 aa14.58□□□□□ -0.08
HLA-DQB1-203ENST00000399082 REM2Q8IYK8 340 aaPredicted RBP14.58□□□□□ -0.08
HLA-DQB1-203ENST00000399082 LPAR1Q92633 364 aa14.58□□□□□ -0.08
HLA-DQB1-203ENST00000399082 CHMP4CQ96CF2 233 aa14.58□□□□□ -0.08
HLA-DQB1-203ENST00000399082 GMCL1Q96IK5 515 aa14.58□□□□□ -0.08
HLA-DQB1-203ENST00000399082 TMEM87BQ96K49 555 aa14.58□□□□□ -0.08
HLA-DQB1-203ENST00000399082 TBC1D32Q96NH3 1257 aa14.58□□□□□ -0.08
HLA-DQB1-203ENST00000399082 C22orf23Q9BZE7 217 aa14.58□□□□□ -0.08
HLA-DQB1-203ENST00000399082 RPAP3Q9H6T3 665 aaPredicted RBP14.58□□□□□ -0.08
HLA-DQB1-203ENST00000399082 WBP1LQ9NX94 342 aa14.58□□□□□ -0.08
HLA-DQB1-203ENST00000399082 TMOD4Q9NZQ9 345 aa14.58□□□□□ -0.08
HLA-DQB1-203ENST00000399082 SLC45A1Q9Y2W3 748 aa14.58□□□□□ -0.08
HLA-DQB1-203ENST00000399082 WDR46O15213 610 aaKnown RBP14.57□□□□□ -0.08
HLA-DQB1-203ENST00000399082 HMGB1P09429 215 aaKnown RBP14.57□□□□□ -0.08
HLA-DQB1-203ENST00000399082 PDHBP11177 359 aa14.57□□□□□ -0.08
HLA-DQB1-203ENST00000399082 WTAPQ15007 396 aa14.57□□□□□ -0.08
HLA-DQB1-203ENST00000399082 FAM83BQ5T0W9 1011 aa14.57□□□□□ -0.08
HLA-DQB1-203ENST00000399082 IFIT1BQ5T764 474 aaKnown RBP14.57□□□□□ -0.08
HLA-DQB1-203ENST00000399082 CATSPERGQ6ZRH7 1159 aa14.57□□□□□ -0.08
HLA-DQB1-203ENST00000399082 RUFY3Q7L099 469 aa14.57□□□□□ -0.08
HLA-DQB1-203ENST00000399082 PNMA1Q8ND90 353 aa14.57□□□□□ -0.08
HLA-DQB1-203ENST00000399082 AGXT2Q9BYV1 514 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms