RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 VCX3AQ9NNX9 186 aa5.53□□□□□ -1.52
TTC3-204ENST00000399017 GNA14O95837 355 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 NBPF1Q3BBV0 1214 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 RINT1Q6NUQ1 792 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 FOXP3Q9BZS1 431 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 NRBP2Q9NSY0 501 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 BLMP54132 1417 aaPredicted RBP5.52□□□□□ -1.53
TTC3-204ENST00000399017 MYO1EQ12965 1108 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 AKAP4Q5JQC9 854 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 BZW1Q7L1Q6 419 aaKnown RBP5.52□□□□□ -1.53
TTC3-204ENST00000399017 CPXCR1Q8N123 301 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 OSCP1Q8WVF1 389 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 OTUB1Q96FW1 271 aaPredicted RBP5.52□□□□□ -1.53
TTC3-204ENST00000399017 RGL1Q9NZL6 768 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 TRAF5O00463 557 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 BIN1O00499 593 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 ERN1O75460 977 aaKnown RBP5.52□□□□□ -1.53
TTC3-204ENST00000399017 TUBBP07437 444 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 POLGP54098 1239 aaPredicted RBP5.52□□□□□ -1.53
TTC3-204ENST00000399017 RBBP5Q15291 538 aaKnown RBP5.52□□□□□ -1.53
TTC3-204ENST00000399017 TRIM42Q8IWZ5 723 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 SLFN12Q8IYM2 578 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 CCDC138Q96M89 665 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 NT5C3AQ9H0P0 336 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 ORC6Q9Y5N6 252 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 PARD3Q8TEW0 1356 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 NCAPD3P42695 1498 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 PPFIA4O75335 1185 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 EZH2Q15910 746 aaKnown RBP5.52□□□□□ -1.53
TTC3-204ENST00000399017 ARHGAP24Q8N264 748 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 GSTA1P08263 222 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 GSTA2P09210 222 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 FSIP1Q8NA03 581 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 BBOF1Q8ND07 529 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 RNF214Q8ND24 703 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 MMS19Q96T76 1030 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 NDEL1Q9GZM8 345 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 AKT3Q9Y243 479 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 TRIM75PA6NK02 468 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 SNTNA6NMZ2 147 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 FAM98CQ17RN3 349 aaKnown RBP5.52□□□□□ -1.53
TTC3-204ENST00000399017 HSPA1LP34931 641 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 MRE11P49959 708 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 CTR9Q6PD62 1173 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 SPON1Q9HCB6 807 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 CASKIN1Q8WXD9 1431 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 PTPN14Q15678 1187 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 FYB2Q5VWT5 728 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 PPP1R21Q6ZMI0 780 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 CHD1LQ86WJ1 897 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 CNPY4Q8N129 248 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 SPC24Q8NBT2 197 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 PRDM5Q9NQX1 630 aaPredicted RBP5.52□□□□□ -1.53
TTC3-204ENST00000399017 SELENONQ9NZV5 590 aa5.52□□□□□ -1.53
TTC3-204ENST00000399017 MYO3BQ8WXR4 1341 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 LETM2Q2VYF4 491 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 RAB44Q7Z6P3 723 aaPredicted RBP5.51□□□□□ -1.53
TTC3-204ENST00000399017 KIF2CQ99661 725 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 ECT2Q9H8V3 914 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 RIMS2Q9UQ26 1411 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 CCDC160A6NGH7 325 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 A6NNZ2 444 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 CCNT1O60563 726 aaKnown RBP5.51□□□□□ -1.53
TTC3-204ENST00000399017 RASSF2P50749 326 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 CDC42EP1Q00587 391 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 GRIN1Q05586 938 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 TUBB8Q3ZCM7 444 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 GBP7Q8N8V2 638 aaPredicted RBP5.51□□□□□ -1.53
TTC3-204ENST00000399017 ENOX1Q8TC92 643 aaKnown RBP5.51□□□□□ -1.53
TTC3-204ENST00000399017 MFSD1Q9H3U5 465 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 UTP11Q9Y3A2 253 aaKnown RBP5.51□□□□□ -1.53
TTC3-204ENST00000399017 PLCH2O75038 1416 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 FGD6Q6ZV73 1430 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 ZBBXA8MT70 800 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 HSPA4P34932 840 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 ITKQ08881 620 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 POSTNQ15063 836 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 DIXDC1Q155Q3 683 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 SEPT8Q92599 483 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 SERPINA10Q9UK55 444 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 TRIP11Q15643 1979 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 LRRIQ3A6PVS8 624 aaPredicted RBP5.51□□□□□ -1.53
TTC3-204ENST00000399017 HNRNPCL2B2RXH8 293 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 DYRK3O43781 588 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 HNRNPCL1O60812 293 aaKnown RBP5.51□□□□□ -1.53
TTC3-204ENST00000399017 ALDH1A2O94788 518 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 SETDB1Q15047 1291 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 PUM3Q15397 648 aaKnown RBP5.51□□□□□ -1.53
TTC3-204ENST00000399017 ARL13BQ3SXY8 428 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 SRRM1Q8IYB3 904 aaKnown RBP5.51□□□□□ -1.53
TTC3-204ENST00000399017 ANKRD36BP1Q96IX9 119 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 KATNAL1Q9BW62 490 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 RP1L1Q8IWN7 2480 aaPredicted RBP5.51□□□□□ -1.53
TTC3-204ENST00000399017 DHX29Q7Z478 1369 aaKnown RBP5.51□□□□□ -1.53
TTC3-204ENST00000399017 FRMD3A2A2Y4 597 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 FLOT1O75955 427 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 TNNI1P19237 187 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 HDAC4P56524 1084 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 KRT81Q14533 505 aa5.51□□□□□ -1.53
TTC3-204ENST00000399017 TSEN34Q9BSV6 310 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms