RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 SHROOM1Q2M3G4 852 aaPredicted RBP12.9□□□□□ -0.35
RCC1-204ENST00000398958 EARS2Q5JPH6 523 aaKnown RBP12.9□□□□□ -0.35
RCC1-204ENST00000398958 CTR9Q6PD62 1173 aa12.9□□□□□ -0.35
RCC1-204ENST00000398958 USP49Q70CQ1 688 aa12.9□□□□□ -0.35
RCC1-204ENST00000398958 BRAPQ7Z569 592 aa12.9□□□□□ -0.35
RCC1-204ENST00000398958 FBXO33Q7Z6M2 555 aa12.9□□□□□ -0.35
RCC1-204ENST00000398958 SMARCE1Q969G3 411 aa12.9□□□□□ -0.35
RCC1-204ENST00000398958 CABP5Q9NP86 173 aa12.9□□□□□ -0.35
RCC1-204ENST00000398958 KIAA1468Q9P260 1216 aa12.9□□□□□ -0.35
RCC1-204ENST00000398958 ATF5Q9Y2D1 282 aaPredicted RBP12.9□□□□□ -0.35
RCC1-204ENST00000398958 WNT7AO00755 349 aa12.89□□□□□ -0.35
RCC1-204ENST00000398958 TADA3O75528 432 aa12.89□□□□□ -0.35
RCC1-204ENST00000398958 CDKL5O76039 1030 aa12.89□□□□□ -0.35
RCC1-204ENST00000398958 OAS2P29728 719 aaKnown RBP12.89□□□□□ -0.35
RCC1-204ENST00000398958 SYKP43405 635 aa12.89□□□□□ -0.35
RCC1-204ENST00000398958 KCNJ6P48051 423 aa12.89□□□□□ -0.35
RCC1-204ENST00000398958 TOB1P50616 345 aaPredicted RBP12.89□□□□□ -0.35
RCC1-204ENST00000398958 SLC39A14Q15043 492 aa12.89□□□□□ -0.35
RCC1-204ENST00000398958 ALX1Q15699 326 aa12.89□□□□□ -0.35
RCC1-204ENST00000398958 LONRF3Q496Y0 759 aa12.89□□□□□ -0.35
RCC1-204ENST00000398958 SGMS1Q86VZ5 419 aa12.89□□□□□ -0.35
RCC1-204ENST00000398958 ENAHQ8N8S7 591 aaPredicted RBP12.89□□□□□ -0.35
RCC1-204ENST00000398958 FANCBQ8NB91 859 aa12.89□□□□□ -0.35
RCC1-204ENST00000398958 STAG1Q8WVM7 1258 aa12.89□□□□□ -0.35
RCC1-204ENST00000398958 EPC1Q9H2F5 836 aa12.89□□□□□ -0.35
RCC1-204ENST00000398958 PHLPP2Q6ZVD8 1323 aa12.89□□□□□ -0.35
RCC1-204ENST00000398958 TSPY2A6NKD2 308 aa12.89□□□□□ -0.35
RCC1-204ENST00000398958 CASP1P29466 404 aa12.89□□□□□ -0.35
RCC1-204ENST00000398958 GOLGA8FQ08AF8 430 aa12.89□□□□□ -0.35
RCC1-204ENST00000398958 GOLGA8DPQ0D2H9 430 aa12.89□□□□□ -0.35
RCC1-204ENST00000398958 SART3Q15020 963 aaKnown RBP12.89□□□□□ -0.35
RCC1-204ENST00000398958 SLC10A5Q5PT55 438 aa12.89□□□□□ -0.35
RCC1-204ENST00000398958 TICAM2Q86XR7 235 aa12.89□□□□□ -0.35
RCC1-204ENST00000398958 MAP3K14Q99558 947 aa12.89□□□□□ -0.35
RCC1-204ENST00000398958 CD209Q9NNX6 404 aa12.89□□□□□ -0.35
RCC1-204ENST00000398958 V9GY48 417 aaPredicted RBP12.89□□□□□ -0.35
RCC1-204ENST00000398958 CICQ96RK0 1608 aaPredicted RBP12.88□□□□□ -0.35
RCC1-204ENST00000398958 CEP350Q5VT06 3117 aa12.88□□□□□ -0.35
RCC1-204ENST00000398958 CCP110O43303 1012 aa12.88□□□□□ -0.35
RCC1-204ENST00000398958 FMNL1O95466 1100 aaPredicted RBP12.88□□□□□ -0.35
RCC1-204ENST00000398958 YEATS4O95619 227 aa12.88□□□□□ -0.35
RCC1-204ENST00000398958 ATP1A3P13637 1013 aa12.88□□□□□ -0.35
RCC1-204ENST00000398958 GPS2Q13227 327 aa12.88□□□□□ -0.35
RCC1-204ENST00000398958 PTPAQ15257 358 aa12.88□□□□□ -0.35
RCC1-204ENST00000398958 FAM177A1Q8N128 213 aaPredicted RBP12.88□□□□□ -0.35
RCC1-204ENST00000398958 TBC1D16Q8TBP0 767 aa12.88□□□□□ -0.35
RCC1-204ENST00000398958 SRRTQ9BXP5 876 aaKnown RBP12.88□□□□□ -0.35
RCC1-204ENST00000398958 CNNM2Q9H8M5 875 aa12.88□□□□□ -0.35
RCC1-204ENST00000398958 PARP3Q9Y6F1 533 aa12.88□□□□□ -0.35
RCC1-204ENST00000398958 RREB1Q92766 1687 aa12.88□□□□□ -0.35
RCC1-204ENST00000398958 C21orf2O43822 256 aa12.88□□□□□ -0.35
RCC1-204ENST00000398958 LIFRP42702 1097 aa12.88□□□□□ -0.35
RCC1-204ENST00000398958 ATL3Q6DD88 541 aa12.88□□□□□ -0.35
RCC1-204ENST00000398958 CRACR2BQ8N4Y2 399 aaPredicted RBP12.88□□□□□ -0.35
RCC1-204ENST00000398958 CCDC34Q96HJ3 373 aa12.88□□□□□ -0.35
RCC1-204ENST00000398958 RBM17Q96I25 401 aaKnown RBP12.88□□□□□ -0.35
RCC1-204ENST00000398958 DCP1AQ9NPI6 582 aaPredicted RBP12.88□□□□□ -0.35
RCC1-204ENST00000398958 PNPLA7Q6ZV29 1317 aa12.87□□□□□ -0.35
RCC1-204ENST00000398958 EFCAB8A8MWE9 144 aa12.87□□□□□ -0.35
RCC1-204ENST00000398958 PPEF1O14829 653 aaPredicted RBP12.87□□□□□ -0.35
RCC1-204ENST00000398958 COBLO75128 1261 aa12.87□□□□□ -0.35
RCC1-204ENST00000398958 SASH3O75995 380 aa12.87□□□□□ -0.35
RCC1-204ENST00000398958 TPM1P09493 284 aa12.87□□□□□ -0.35
RCC1-204ENST00000398958 DHX8Q14562 1220 aaKnown RBP12.87□□□□□ -0.35
RCC1-204ENST00000398958 IFIT1BQ5T764 474 aaKnown RBP12.87□□□□□ -0.35
RCC1-204ENST00000398958 TRIM65Q6PJ69 517 aa12.87□□□□□ -0.35
RCC1-204ENST00000398958 MKNK2Q9HBH9 465 aa12.87□□□□□ -0.35
RCC1-204ENST00000398958 LRP5O75197 1615 aa12.87□□□□□ -0.35
RCC1-204ENST00000398958 MYH13Q9UKX3 1938 aa12.87□□□□□ -0.35
RCC1-204ENST00000398958 WDR19Q8NEZ3 1342 aa12.87□□□□□ -0.35
RCC1-204ENST00000398958 BTDP43251 543 aa12.87□□□□□ -0.35
RCC1-204ENST00000398958 TNNT3P45378 269 aaPredicted RBP12.87□□□□□ -0.35
RCC1-204ENST00000398958 FANCCQ00597 558 aa12.87□□□□□ -0.35
RCC1-204ENST00000398958 SMC1AQ14683 1233 aaKnown RBP12.87□□□□□ -0.35
RCC1-204ENST00000398958 NOSTRINQ8IVI9 506 aa12.87□□□□□ -0.35
RCC1-204ENST00000398958 TRIM22Q8IYM9 498 aa12.87□□□□□ -0.35
RCC1-204ENST00000398958 STAMQ92783 540 aa12.87□□□□□ -0.35
RCC1-204ENST00000398958 ZC3H12CQ9C0D7 883 aaKnown RBP12.87□□□□□ -0.35
RCC1-204ENST00000398958 ANKRD2Q9GZV1 360 aa12.87□□□□□ -0.35
RCC1-204ENST00000398958 MYH2Q9UKX2 1941 aa12.86□□□□□ -0.35
RCC1-204ENST00000398958 XDHP47989 1333 aa12.86□□□□□ -0.35
RCC1-204ENST00000398958 A0A1W2PQ27 194 aa12.86□□□□□ -0.35
RCC1-204ENST00000398958 A0A1W2PQ64 194 aa12.86□□□□□ -0.35
RCC1-204ENST00000398958 A0A1W2PQD8 194 aa12.86□□□□□ -0.35
RCC1-204ENST00000398958 TBC1D8O95759 1140 aa12.86□□□□□ -0.35
RCC1-204ENST00000398958 MMP1P03956 469 aa12.86□□□□□ -0.35
RCC1-204ENST00000398958 IFNAR1P17181 557 aa12.86□□□□□ -0.35
RCC1-204ENST00000398958 GNAT2P19087 354 aa12.86□□□□□ -0.35
RCC1-204ENST00000398958 DPP8Q6V1X1 898 aaPredicted RBP12.86□□□□□ -0.35
RCC1-204ENST00000398958 FOXP4Q8IVH2 680 aaPredicted RBP12.86□□□□□ -0.35
RCC1-204ENST00000398958 ESR2Q92731 530 aa12.86□□□□□ -0.35
RCC1-204ENST00000398958 ZSCAN10Q96SZ4 725 aaPredicted RBP12.86□□□□□ -0.35
RCC1-204ENST00000398958 BPIFA3Q9BQP9 254 aa12.86□□□□□ -0.35
RCC1-204ENST00000398958 FANCGO15287 622 aa12.86□□□□□ -0.35
RCC1-204ENST00000398958 ATP8B1O43520 1251 aa12.86□□□□□ -0.35
RCC1-204ENST00000398958 PRR29P0C7W0 189 aa12.86□□□□□ -0.35
RCC1-204ENST00000398958 CMA1P23946 247 aa12.86□□□□□ -0.35
RCC1-204ENST00000398958 TFAP4Q01664 338 aa12.86□□□□□ -0.35
RCC1-204ENST00000398958 ZSCAN26Q16670 478 aa12.86□□□□□ -0.35
RCC1-204ENST00000398958 MUM1L1Q5H9M0 696 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms