RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 APOBEC3FQ8IUX4 373 aaKnown RBP3.02□□□□□ -1.93
CHD9-202ENST00000398510 C14orf93Q9H972 538 aaKnown RBP3.02□□□□□ -1.93
CHD9-202ENST00000398510 HOMER3Q9NSC5 361 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 TACC1O75410 805 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 CASQ1P31415 396 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 LAMB3Q13751 1172 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 HERC4Q5GLZ8 1057 aaPredicted RBP3.02□□□□□ -1.93
CHD9-202ENST00000398510 CCDC102BQ68D86 513 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 LDHAL6AQ6ZMR3 332 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 FAM43BQ6ZT52 329 aaPredicted RBP3.02□□□□□ -1.93
CHD9-202ENST00000398510 UBE3BQ7Z3V4 1068 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 DHX38Q92620 1227 aaKnown RBP3.02□□□□□ -1.93
CHD9-202ENST00000398510 P3H4Q92791 437 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.02□□□□□ -1.93
CHD9-202ENST00000398510 SLC12A6Q9UHW9 1150 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 MYOM1P52179 1685 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 HPDP32754 393 aaPredicted RBP3.02□□□□□ -1.93
CHD9-202ENST00000398510 RASSF7Q02833 373 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 FLIIQ13045 1269 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 MTMR3Q13615 1198 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 SETDB1Q15047 1291 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 AOC3Q16853 763 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 NBPF1Q3BBV0 1214 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 CYP26C1Q6V0L0 522 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 PPP1R21Q6ZMI0 780 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 TAX1BP1Q86VP1 789 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 ZNF557Q8N988 423 aaPredicted RBP3.02□□□□□ -1.93
CHD9-202ENST00000398510 CHURC1Q8WUH1 139 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 ZNF592Q92610 1267 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 RGPD4Q7Z3J3 1758 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 TMEM247A6NEH6 219 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 GRM8O00222 908 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 SH3BP5O60239 455 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 ABL2P42684 1182 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 NPY2RP49146 381 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 EVCP57679 992 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 PRKCQQ04759 706 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 TMEM67Q5HYA8 995 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 KCTD17Q8N5Z5 321 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 CNNM3Q8NE01 707 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 CCT6BQ92526 530 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 ATP6V0A1Q93050 837 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 CFAP36Q96G28 342 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 CENPKQ9BS16 269 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 ECHDC1Q9NTX5 307 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 GOLGA4Q13439 2230 aaKnown RBP3.02□□□□□ -1.93
CHD9-202ENST00000398510 ARFGEF2Q9Y6D5 1785 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 MYO16Q9Y6X6 1858 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 MACROD2A1Z1Q3 448 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 TTI1O43156 1089 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 SLC26A4O43511 780 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 ZBED4O75132 1171 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 DEXIO95424 95 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 TOP1P11387 765 aaKnown RBP3.02□□□□□ -1.93
CHD9-202ENST00000398510 KRT3P12035 628 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 CAPN2P17655 700 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 UBE2HP62256 183 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 CEP55Q53EZ4 464 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 KANK4Q5T7N3 995 aaPredicted RBP3.02□□□□□ -1.93
CHD9-202ENST00000398510 KRT25Q7Z3Z0 450 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 CCDC50Q8IVM0 306 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 GIMAP7Q8NHV1 300 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 GZF1Q9H116 711 aaPredicted RBP3.02□□□□□ -1.93
CHD9-202ENST00000398510 CCNL1Q9UK58 526 aaPredicted RBP3.02□□□□□ -1.93
CHD9-202ENST00000398510 CNPY2Q9Y2B0 182 aa3.02□□□□□ -1.93
CHD9-202ENST00000398510 I3L4J1 428 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 APAF1O14727 1248 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 BUB1BO60566 1050 aaPredicted RBP3.01□□□□□ -1.93
CHD9-202ENST00000398510 XRCC6P12956 609 aaKnown RBP eCLIP3.01□□□□□ -1.933e-6■■■□□ 16.1
CHD9-202ENST00000398510 VAV2P52735 878 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 GPR162Q16538 588 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 POLE3Q9NRF9 147 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 HELLSQ9NRZ9 838 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 FARP1Q9Y4F1 1045 aaPredicted RBP3.01□□□□□ -1.93
CHD9-202ENST00000398510 XDHP47989 1333 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 CETN3O15182 167 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 PHKG1Q16816 387 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 ARMC9Q7Z3E5 817 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 SPATS2Q86XZ4 545 aaKnown RBP3.01□□□□□ -1.93
CHD9-202ENST00000398510 FAM167AQ96KS9 214 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 TRIM47Q96LD4 638 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 CCDC17Q96LX7 622 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 VEZTQ9HBM0 779 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 ANAPC5Q9UJX4 755 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 WDR64B1ANS9 1081 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 KIF28PB7ZC32 967 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 KIF3CO14782 793 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 PDE6AP16499 860 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 NOP14P78316 857 aaKnown RBP3.01□□□□□ -1.93
CHD9-202ENST00000398510 DALRD3Q5D0E6 543 aaKnown RBP3.01□□□□□ -1.93
CHD9-202ENST00000398510 DDX42Q86XP3 938 aaKnown RBP eCLIP3.01□□□□□ -1.93
CHD9-202ENST00000398510 C2orf69Q8N8R5 385 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 DDX50Q9BQ39 737 aaKnown RBP3.01□□□□□ -1.93
CHD9-202ENST00000398510 CCDC68Q9H2F9 335 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 JADE2Q9NQC1 790 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 PAG1Q9NWQ8 432 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 PHRF1Q9P1Y6 1649 aaKnown RBP3.01□□□□□ -1.93
CHD9-202ENST00000398510 AATKQ6ZMQ8 1374 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 MED7O43513 233 aa3.01□□□□□ -1.93
CHD9-202ENST00000398510 CALCOCO2Q13137 446 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms