RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 HOXC10Q9NYD6 342 aa16.93■□□□□ 0.3
HDDC2-202ENST00000398153 MORF4L1Q9UBU8 362 aa16.93■□□□□ 0.3
HDDC2-202ENST00000398153 WDR46O15213 610 aaKnown RBP16.92■□□□□ 0.3
HDDC2-202ENST00000398153 PRDM1O75626 825 aa16.92■□□□□ 0.3
HDDC2-202ENST00000398153 TTLL1O95922 423 aa16.92■□□□□ 0.3
HDDC2-202ENST00000398153 PSMC4P43686 418 aa16.92■□□□□ 0.3
HDDC2-202ENST00000398153 TFAP4Q01664 338 aa16.92■□□□□ 0.3
HDDC2-202ENST00000398153 CTDSPL2Q05D32 466 aa16.92■□□□□ 0.3
HDDC2-202ENST00000398153 MFSD6Q6ZSS7 791 aa16.92■□□□□ 0.3
HDDC2-202ENST00000398153 ANKRD13CQ8N6S4 541 aa16.92■□□□□ 0.3
HDDC2-202ENST00000398153 STAG1Q8WVM7 1258 aa16.92■□□□□ 0.3
HDDC2-202ENST00000398153 ABHD8Q96I13 439 aa16.92■□□□□ 0.3
HDDC2-202ENST00000398153 RPAP3Q9H6T3 665 aaPredicted RBP16.92■□□□□ 0.3
HDDC2-202ENST00000398153 PTPN22Q9Y2R2 807 aa16.92■□□□□ 0.3
HDDC2-202ENST00000398153 MYPNQ86TC9 1320 aa16.92■□□□□ 0.3
HDDC2-202ENST00000398153 TSPY2A6NKD2 308 aa16.91■□□□□ 0.3
HDDC2-202ENST00000398153 SGSM2O43147 1006 aa16.91■□□□□ 0.3
HDDC2-202ENST00000398153 FCGRTP55899 365 aa16.91■□□□□ 0.3
HDDC2-202ENST00000398153 COG2Q14746 738 aa16.91■□□□□ 0.3
HDDC2-202ENST00000398153 IMMTQ16891 758 aaKnown RBP16.91■□□□□ 0.3
HDDC2-202ENST00000398153 AKNAD1Q5T1N1 836 aa16.91■□□□□ 0.3
HDDC2-202ENST00000398153 IFFO2Q5TF58 517 aa16.91■□□□□ 0.3
HDDC2-202ENST00000398153 TCP11L1Q9NUJ3 509 aa16.91■□□□□ 0.3
HDDC2-202ENST00000398153 RABGAP1Q9Y3P9 1069 aa16.91■□□□□ 0.3
HDDC2-202ENST00000398153 FMNL1O95466 1100 aaPredicted RBP16.9■□□□□ 0.3
HDDC2-202ENST00000398153 ATP2B2Q01814 1243 aa16.9■□□□□ 0.3
HDDC2-202ENST00000398153 GPRC5AQ8NFJ5 357 aa16.9■□□□□ 0.3
HDDC2-202ENST00000398153 CEP95Q96GE4 821 aa16.9■□□□□ 0.3
HDDC2-202ENST00000398153 LAMA4Q16363 1823 aa16.9■□□□□ 0.3
HDDC2-202ENST00000398153 MGAMO43451 1857 aa16.89■□□□□ 0.29
HDDC2-202ENST00000398153 RANBP6O60518 1105 aaKnown RBP16.89■□□□□ 0.29
HDDC2-202ENST00000398153 NOVP48745 357 aa16.89■□□□□ 0.29
HDDC2-202ENST00000398153 CLEC10AQ8IUN9 316 aa16.89■□□□□ 0.29
HDDC2-202ENST00000398153 MB21D1Q8N884 522 aa16.89■□□□□ 0.29
HDDC2-202ENST00000398153 GMCL1P1Q8NEA9 526 aa16.89■□□□□ 0.29
HDDC2-202ENST00000398153 TRIM47Q96LD4 638 aa16.89■□□□□ 0.29
HDDC2-202ENST00000398153 RBPJLQ9UBG7 517 aa16.89■□□□□ 0.29
HDDC2-202ENST00000398153 CLIP2Q9UDT6 1046 aa16.89■□□□□ 0.29
HDDC2-202ENST00000398153 SRRDQ9UH36 339 aa16.89■□□□□ 0.29
HDDC2-202ENST00000398153 MYH4Q9Y623 1939 aa16.88■□□□□ 0.29
HDDC2-202ENST00000398153 F5H6K3 240 aa16.88■□□□□ 0.29
HDDC2-202ENST00000398153 CCNA1P78396 465 aa16.88■□□□□ 0.29
HDDC2-202ENST00000398153 KLRC3Q07444 240 aa16.88■□□□□ 0.29
HDDC2-202ENST00000398153 CCDC178Q5BJE1 867 aa16.88■□□□□ 0.29
HDDC2-202ENST00000398153 FAM47AQ5JRC9 791 aa16.88■□□□□ 0.29
HDDC2-202ENST00000398153 CASC1Q6TDU7 716 aa16.88■□□□□ 0.29
HDDC2-202ENST00000398153 ESR2Q92731 530 aa16.88■□□□□ 0.29
HDDC2-202ENST00000398153 COA7Q96BR5 231 aa16.88■□□□□ 0.29
HDDC2-202ENST00000398153 TTC14Q96N46 770 aa16.88■□□□□ 0.29
HDDC2-202ENST00000398153 TANGO6Q9C0B7 1094 aa16.88■□□□□ 0.29
HDDC2-202ENST00000398153 ARHGAP39Q9C0H5 1083 aa16.88■□□□□ 0.29
HDDC2-202ENST00000398153 CNNM2Q9H8M5 875 aa16.88■□□□□ 0.29
HDDC2-202ENST00000398153 TOMM22Q9NS69 142 aa16.88■□□□□ 0.29
HDDC2-202ENST00000398153 HPS5Q9UPZ3 1129 aa16.88■□□□□ 0.29
HDDC2-202ENST00000398153 SPDYE16A6NNV3 312 aaPredicted RBP16.87■□□□□ 0.29
HDDC2-202ENST00000398153 TNPO2O14787 897 aaKnown RBP16.87■□□□□ 0.29
HDDC2-202ENST00000398153 MAPK4P31152 587 aa16.87■□□□□ 0.29
HDDC2-202ENST00000398153 HAND2P61296 217 aa16.87■□□□□ 0.29
HDDC2-202ENST00000398153 ERVK-9P63128 1117 aa16.87■□□□□ 0.29
HDDC2-202ENST00000398153 ERVK-24P63145 666 aa16.87■□□□□ 0.29
HDDC2-202ENST00000398153 CAP1Q01518 475 aa16.87■□□□□ 0.29
HDDC2-202ENST00000398153 KIAA1755Q5JYT7 1200 aa16.87■□□□□ 0.29
HDDC2-202ENST00000398153 KIAA1211Q6ZU35 1233 aa16.87■□□□□ 0.29
HDDC2-202ENST00000398153 NBPF11Q86T75 865 aa16.87■□□□□ 0.29
HDDC2-202ENST00000398153 SPICE1Q8N0Z3 855 aa16.87■□□□□ 0.29
HDDC2-202ENST00000398153 KRT23Q9C075 422 aa16.87■□□□□ 0.29
HDDC2-202ENST00000398153 NBPF3Q9H094 633 aa16.87■□□□□ 0.29
HDDC2-202ENST00000398153 IL25Q9H293 177 aa16.87■□□□□ 0.29
HDDC2-202ENST00000398153 IL17RBQ9NRM6 502 aa16.87■□□□□ 0.29
HDDC2-202ENST00000398153 U3KPZ7 1027 aaPredicted RBP16.87■□□□□ 0.29
HDDC2-202ENST00000398153 FLOT1O75955 427 aa16.86■□□□□ 0.29
HDDC2-202ENST00000398153 CTGFP29279 349 aa16.86■□□□□ 0.29
HDDC2-202ENST00000398153 DSG3P32926 999 aa16.86■□□□□ 0.29
HDDC2-202ENST00000398153 MAP4K1Q92918 833 aa16.86■□□□□ 0.29
HDDC2-202ENST00000398153 TXNRD2Q9NNW7 524 aa16.86■□□□□ 0.29
HDDC2-202ENST00000398153 INCENPQ9NQS7 918 aa16.86■□□□□ 0.29
HDDC2-202ENST00000398153 ADAMTS5Q9UNA0 930 aa16.86■□□□□ 0.29
HDDC2-202ENST00000398153 STX8Q9UNK0 236 aa16.86■□□□□ 0.29
HDDC2-202ENST00000398153 TACC3Q9Y6A5 838 aa16.86■□□□□ 0.29
HDDC2-202ENST00000398153 IRF5Q13568 498 aa16.85■□□□□ 0.29
HDDC2-202ENST00000398153 RRP12Q5JTH9 1297 aaKnown RBP16.85■□□□□ 0.29
HDDC2-202ENST00000398153 IQCA1Q86XH1 822 aa16.85■□□□□ 0.29
HDDC2-202ENST00000398153 TBC1D10CQ8IV04 446 aa16.85■□□□□ 0.29
HDDC2-202ENST00000398153 CCAR1Q8IX12 1150 aaKnown RBP16.85■□□□□ 0.29
HDDC2-202ENST00000398153 GMCL1Q96IK5 515 aa16.85■□□□□ 0.29
HDDC2-202ENST00000398153 ESYT1Q9BSJ8 1104 aa16.85■□□□□ 0.29
HDDC2-202ENST00000398153 RLFQ13129 1914 aa16.85■□□□□ 0.29
HDDC2-202ENST00000398153 PARP14Q460N5 1801 aa16.84■□□□□ 0.29
HDDC2-202ENST00000398153 NDUFB10O96000 172 aa16.84■□□□□ 0.29
HDDC2-202ENST00000398153 FDX1P10109 184 aa16.84■□□□□ 0.29
HDDC2-202ENST00000398153 DGKHQ86XP1 1220 aa16.84■□□□□ 0.29
HDDC2-202ENST00000398153 PRPF38AQ8NAV1 312 aaKnown RBP16.84■□□□□ 0.29
HDDC2-202ENST00000398153 RAET1EQ8TD07 263 aa16.84■□□□□ 0.29
HDDC2-202ENST00000398153 ARMC5Q96C12 935 aa16.84■□□□□ 0.29
HDDC2-202ENST00000398153 PAGR1Q9BTK6 254 aa16.84■□□□□ 0.29
HDDC2-202ENST00000398153 FEM1BQ9UK73 627 aa16.84■□□□□ 0.29
HDDC2-202ENST00000398153 A0A0G2JMZ2 1700 aa16.83■□□□□ 0.28
HDDC2-202ENST00000398153 ZSWIM8A7E2V4 1837 aa16.83■□□□□ 0.28
HDDC2-202ENST00000398153 RAD21O60216 631 aa16.83■□□□□ 0.28
HDDC2-202ENST00000398153 PLA2G6O60733 806 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms