RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 GPRC5AQ8NFJ5 357 aa22.3■■□□□ 1.16
COLCA2-201ENST00000398035 MKL1Q969V6 931 aa22.3■■□□□ 1.16
COLCA2-201ENST00000398035 MTMR4Q9NYA4 1195 aa22.3■■□□□ 1.16
COLCA2-201ENST00000398035 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.3■■□□□ 1.16
COLCA2-201ENST00000398035 CASP8AP2Q9UKL3 1982 aa22.29■■□□□ 1.16
COLCA2-201ENST00000398035 IGKV6D-41A0A0C4DH26 115 aa22.29■■□□□ 1.16
COLCA2-201ENST00000398035 TSPY2A6NKD2 308 aa22.29■■□□□ 1.16
COLCA2-201ENST00000398035 WDR46O15213 610 aaKnown RBP22.29■■□□□ 1.16
COLCA2-201ENST00000398035 LBX2Q6XYB7 198 aa22.29■■□□□ 1.16
COLCA2-201ENST00000398035 MFSD6Q6ZSS7 791 aa22.29■■□□□ 1.16
COLCA2-201ENST00000398035 CLIP2Q9UDT6 1046 aa22.29■■□□□ 1.16
COLCA2-201ENST00000398035 HPS5Q9UPZ3 1129 aa22.29■■□□□ 1.16
COLCA2-201ENST00000398035 RABGAP1Q9Y3P9 1069 aa22.29■■□□□ 1.16
COLCA2-201ENST00000398035 BMP2KLQ5H9B9 411 aa22.28■■□□□ 1.16
COLCA2-201ENST00000398035 NBPF11Q86T75 865 aa22.28■■□□□ 1.16
COLCA2-201ENST00000398035 COA7Q96BR5 231 aa22.28■■□□□ 1.16
COLCA2-201ENST00000398035 TRIM47Q96LD4 638 aa22.28■■□□□ 1.16
COLCA2-201ENST00000398035 SRRDQ9UH36 339 aa22.28■■□□□ 1.16
COLCA2-201ENST00000398035 RANBP6O60518 1105 aaKnown RBP22.27■■□□□ 1.16
COLCA2-201ENST00000398035 IMMTQ16891 758 aaKnown RBP22.27■■□□□ 1.16
COLCA2-201ENST00000398035 AKNAD1Q5T1N1 836 aa22.27■■□□□ 1.16
COLCA2-201ENST00000398035 CEP95Q96GE4 821 aa22.27■■□□□ 1.16
COLCA2-201ENST00000398035 TANGO6Q9C0B7 1094 aa22.27■■□□□ 1.16
COLCA2-201ENST00000398035 ARHGAP39Q9C0H5 1083 aa22.27■■□□□ 1.16
COLCA2-201ENST00000398035 TOMM22Q9NS69 142 aa22.27■■□□□ 1.16
COLCA2-201ENST00000398035 RBPJLQ9UBG7 517 aa22.27■■□□□ 1.16
COLCA2-201ENST00000398035 CCNA1P78396 465 aa22.26■■□□□ 1.15
COLCA2-201ENST00000398035 FAM47AQ5JRC9 791 aa22.26■■□□□ 1.15
COLCA2-201ENST00000398035 CLEC10AQ8IUN9 316 aa22.26■■□□□ 1.15
COLCA2-201ENST00000398035 CCAR1Q8IX12 1150 aaKnown RBP22.26■■□□□ 1.15
COLCA2-201ENST00000398035 MB21D1Q8N884 522 aa22.26■■□□□ 1.15
COLCA2-201ENST00000398035 STAG1Q8WVM7 1258 aa22.26■■□□□ 1.15
COLCA2-201ENST00000398035 PPP4R2Q9NY27 417 aa22.26■■□□□ 1.15
COLCA2-201ENST00000398035 PLIN4Q96Q06 1357 aa22.26■■□□□ 1.15
COLCA2-201ENST00000398035 PHIPQ8WWQ0 1821 aa22.26■■□□□ 1.15
COLCA2-201ENST00000398035 MYPNQ86TC9 1320 aa22.26■■□□□ 1.15
COLCA2-201ENST00000398035 CCDC85CA6NKD9 419 aa22.25■■□□□ 1.15
COLCA2-201ENST00000398035 F5H6K3 240 aa22.25■■□□□ 1.15
COLCA2-201ENST00000398035 TNPO2O14787 897 aaKnown RBP22.25■■□□□ 1.15
COLCA2-201ENST00000398035 KLRC3Q07444 240 aa22.25■■□□□ 1.15
COLCA2-201ENST00000398035 SPICE1Q8N0Z3 855 aa22.25■■□□□ 1.15
COLCA2-201ENST00000398035 TCP11L1Q9NUJ3 509 aa22.25■■□□□ 1.15
COLCA2-201ENST00000398035 SGSM2O43147 1006 aa22.24■■□□□ 1.15
COLCA2-201ENST00000398035 RAD21O60216 631 aa22.24■■□□□ 1.15
COLCA2-201ENST00000398035 MAPK4P31152 587 aa22.24■■□□□ 1.15
COLCA2-201ENST00000398035 ERVK-9P63128 1117 aa22.24■■□□□ 1.15
COLCA2-201ENST00000398035 ERVK-24P63145 666 aa22.24■■□□□ 1.15
COLCA2-201ENST00000398035 CAP1Q01518 475 aa22.24■■□□□ 1.15
COLCA2-201ENST00000398035 ESR2Q92731 530 aa22.24■■□□□ 1.15
COLCA2-201ENST00000398035 FLOT1O75955 427 aa22.23■■□□□ 1.15
COLCA2-201ENST00000398035 CTGFP29279 349 aa22.23■■□□□ 1.15
COLCA2-201ENST00000398035 HAND2P61296 217 aa22.23■■□□□ 1.15
COLCA2-201ENST00000398035 CCDC178Q5BJE1 867 aa22.23■■□□□ 1.15
COLCA2-201ENST00000398035 KIAA1211Q6ZU35 1233 aa22.23■■□□□ 1.15
COLCA2-201ENST00000398035 GMCL1P1Q8NEA9 526 aa22.23■■□□□ 1.15
COLCA2-201ENST00000398035 RAET1EQ8TD07 263 aa22.23■■□□□ 1.15
COLCA2-201ENST00000398035 INCENPQ9NQS7 918 aa22.23■■□□□ 1.15
COLCA2-201ENST00000398035 SPDYE16A6NNV3 312 aaPredicted RBP22.23■■□□□ 1.15
COLCA2-201ENST00000398035 DSG3P32926 999 aa22.23■■□□□ 1.15
COLCA2-201ENST00000398035 RRP12Q5JTH9 1297 aaKnown RBP22.23■■□□□ 1.15
COLCA2-201ENST00000398035 KIAA1755Q5JYT7 1200 aa22.23■■□□□ 1.15
COLCA2-201ENST00000398035 CASC1Q6TDU7 716 aa22.23■■□□□ 1.15
COLCA2-201ENST00000398035 TTC14Q96N46 770 aa22.23■■□□□ 1.15
COLCA2-201ENST00000398035 PAGR1Q9BTK6 254 aa22.23■■□□□ 1.15
COLCA2-201ENST00000398035 TXNRD2Q9NNW7 524 aa22.23■■□□□ 1.15
COLCA2-201ENST00000398035 STX8Q9UNK0 236 aa22.23■■□□□ 1.15
COLCA2-201ENST00000398035 BAZ2AQ9UIF9 1905 aaKnown RBP22.22■■□□□ 1.15
COLCA2-201ENST00000398035 SLC9C1Q4G0N8 1177 aa22.22■■□□□ 1.15
COLCA2-201ENST00000398035 IL17RBQ9NRM6 502 aa22.22■■□□□ 1.15
COLCA2-201ENST00000398035 PTCH2Q9Y6C5 1203 aa22.22■■□□□ 1.15
COLCA2-201ENST00000398035 U3KPZ7 1027 aaPredicted RBP22.22■■□□□ 1.15
COLCA2-201ENST00000398035 ATAD5Q96QE3 1844 aa22.21■■□□□ 1.15
COLCA2-201ENST00000398035 CAPN15O75808 1086 aa22.21■■□□□ 1.15
COLCA2-201ENST00000398035 ECM2O94769 699 aaPredicted RBP22.21■■□□□ 1.15
COLCA2-201ENST00000398035 Q3C1V9 767 aa22.21■■□□□ 1.15
COLCA2-201ENST00000398035 KRT23Q9C075 422 aa22.21■■□□□ 1.15
COLCA2-201ENST00000398035 CNNM2Q9H8M5 875 aa22.21■■□□□ 1.15
COLCA2-201ENST00000398035 LOC285556D6RIA3 1793 aa22.2■■□□□ 1.14
COLCA2-201ENST00000398035 NOVP48745 357 aa22.2■■□□□ 1.14
COLCA2-201ENST00000398035 IRF5Q13568 498 aa22.2■■□□□ 1.14
COLCA2-201ENST00000398035 ARMC5Q96C12 935 aa22.2■■□□□ 1.14
COLCA2-201ENST00000398035 CWC22Q9HCG8 908 aaKnown RBP22.2■■□□□ 1.14
COLCA2-201ENST00000398035 TACC3Q9Y6A5 838 aa22.2■■□□□ 1.14
COLCA2-201ENST00000398035 NDUFB10O96000 172 aa22.19■■□□□ 1.14
COLCA2-201ENST00000398035 FLT3LGP49771 235 aa22.19■■□□□ 1.14
COLCA2-201ENST00000398035 PRKCZQ05513 592 aa22.19■■□□□ 1.14
COLCA2-201ENST00000398035 FAM83BQ5T0W9 1011 aa22.19■■□□□ 1.14
COLCA2-201ENST00000398035 IQCA1Q86XH1 822 aa22.19■■□□□ 1.14
COLCA2-201ENST00000398035 PRPF38AQ8NAV1 312 aaKnown RBP22.19■■□□□ 1.14
COLCA2-201ENST00000398035 PXYLP1Q8TE99 480 aa22.19■■□□□ 1.14
COLCA2-201ENST00000398035 IL25Q9H293 177 aa22.19■■□□□ 1.14
COLCA2-201ENST00000398035 ADAMTS5Q9UNA0 930 aa22.19■■□□□ 1.14
COLCA2-201ENST00000398035 GRK4P32298 578 aa22.18■■□□□ 1.14
COLCA2-201ENST00000398035 SLFN13Q68D06 897 aa22.18■■□□□ 1.14
COLCA2-201ENST00000398035 TBC1D10CQ8IV04 446 aa22.18■■□□□ 1.14
COLCA2-201ENST00000398035 MAP4K1Q92918 833 aa22.18■■□□□ 1.14
COLCA2-201ENST00000398035 GMCL1Q96IK5 515 aa22.18■■□□□ 1.14
COLCA2-201ENST00000398035 NBPF3Q9H094 633 aa22.18■■□□□ 1.14
COLCA2-201ENST00000398035 FEM1BQ9UK73 627 aa22.18■■□□□ 1.14
COLCA2-201ENST00000398035 PPP1R9AQ9ULJ8 1098 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms