RNA–Protein interactions for RNA: ENST00000398030.8

APEX1-202, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APEX1, Length 1,387 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-202ENST00000398030 SCAF8Q9UPN6 1271 aaKnown RBP13.52□□□□□ -0.25
APEX1-202ENST00000398030 NID2Q14112 1375 aa13.52□□□□□ -0.25
APEX1-202ENST00000398030 YY1P25490 414 aa13.51□□□□□ -0.25
APEX1-202ENST00000398030 SCRN1Q12765 414 aa13.51□□□□□ -0.25
APEX1-202ENST00000398030 TRAF1Q13077 416 aa13.51□□□□□ -0.25
APEX1-202ENST00000398030 IKQ13123 557 aaPredicted RBP13.51□□□□□ -0.25
APEX1-202ENST00000398030 PRKG1Q13976 671 aa13.51□□□□□ -0.25
APEX1-202ENST00000398030 LRRC47Q8N1G4 583 aaKnown RBP13.51□□□□□ -0.25
APEX1-202ENST00000398030 SMC1BQ8NDV3 1235 aa13.51□□□□□ -0.25
APEX1-202ENST00000398030 RBM46Q8TBY0 533 aaKnown RBP13.51□□□□□ -0.25
APEX1-202ENST00000398030 MKL1Q969V6 931 aa13.51□□□□□ -0.25
APEX1-202ENST00000398030 TMOD4Q9NZQ9 345 aa13.51□□□□□ -0.25
APEX1-202ENST00000398030 SEC63Q9UGP8 760 aaKnown RBP13.51□□□□□ -0.25
APEX1-202ENST00000398030 CIZ1Q9ULV3 898 aaPredicted RBP13.51□□□□□ -0.25
APEX1-202ENST00000398030 MTMR7Q9Y216 660 aa13.51□□□□□ -0.25
APEX1-202ENST00000398030 CDK5RAP2Q96SN8 1893 aa13.51□□□□□ -0.25
APEX1-202ENST00000398030 PTPDC1A2A3K4 754 aa13.5□□□□□ -0.25
APEX1-202ENST00000398030 C19orf81C9J6K1 198 aa13.5□□□□□ -0.25
APEX1-202ENST00000398030 USP17L10C9JJH3 530 aa13.5□□□□□ -0.25
APEX1-202ENST00000398030 NOVP48745 357 aa13.5□□□□□ -0.25
APEX1-202ENST00000398030 NUCB2P80303 420 aa13.5□□□□□ -0.25
APEX1-202ENST00000398030 GRM4Q14833 912 aa13.5□□□□□ -0.25
APEX1-202ENST00000398030 PRAMEF18Q5VWM3 479 aa13.5□□□□□ -0.25
APEX1-202ENST00000398030 SLFN13Q68D06 897 aa13.5□□□□□ -0.25
APEX1-202ENST00000398030 CDAN1Q8IWY9 1227 aa13.5□□□□□ -0.25
APEX1-202ENST00000398030 CCDC144CPQ8IYA2 1237 aa13.5□□□□□ -0.25
APEX1-202ENST00000398030 NECAB1Q8N987 351 aa13.5□□□□□ -0.25
APEX1-202ENST00000398030 SPRYD3Q8NCJ5 442 aa13.5□□□□□ -0.25
APEX1-202ENST00000398030 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.5□□□□□ -0.25
APEX1-202ENST00000398030 LPAR1Q92633 364 aa13.5□□□□□ -0.25
APEX1-202ENST00000398030 MYL10Q9BUA6 226 aa13.5□□□□□ -0.25
APEX1-202ENST00000398030 GPHNQ9NQX3 736 aaPredicted RBP13.5□□□□□ -0.25
APEX1-202ENST00000398030 TMX2Q9Y320 296 aa13.5□□□□□ -0.25
APEX1-202ENST00000398030 PHF20L1A8MW92 1017 aa13.49□□□□□ -0.25
APEX1-202ENST00000398030 H3BQV1 296 aa13.49□□□□□ -0.25
APEX1-202ENST00000398030 IFNAR1P17181 557 aa13.49□□□□□ -0.25
APEX1-202ENST00000398030 SMARCA1P28370 1054 aa13.49□□□□□ -0.25
APEX1-202ENST00000398030 TROAPQ12815 778 aa13.49□□□□□ -0.25
APEX1-202ENST00000398030 MAP3K11Q16584 847 aa13.49□□□□□ -0.25
APEX1-202ENST00000398030 IFFO2Q5TF58 517 aa13.49□□□□□ -0.25
APEX1-202ENST00000398030 ZNF280CQ8ND82 737 aa13.49□□□□□ -0.25
APEX1-202ENST00000398030 RNF26Q9BY78 433 aaPredicted RBP13.49□□□□□ -0.25
APEX1-202ENST00000398030 GBA2Q9HCG7 927 aaPredicted RBP13.49□□□□□ -0.25
APEX1-202ENST00000398030 FOXD4L1Q9NU39 408 aa13.49□□□□□ -0.25
APEX1-202ENST00000398030 CTDP1Q9Y5B0 961 aaPredicted RBP13.49□□□□□ -0.25
APEX1-202ENST00000398030 STK36Q9NRP7 1315 aa13.49□□□□□ -0.25
APEX1-202ENST00000398030 USP2O75604 605 aaPredicted RBP13.48□□□□□ -0.25
APEX1-202ENST00000398030 CELF2O95319 508 aaKnown RBP13.48□□□□□ -0.25
APEX1-202ENST00000398030 DEXIO95424 95 aa13.48□□□□□ -0.25
APEX1-202ENST00000398030 LARGE1O95461 756 aa13.48□□□□□ -0.25
APEX1-202ENST00000398030 BMP3P12645 472 aa13.48□□□□□ -0.25
APEX1-202ENST00000398030 RXRAP19793 462 aa13.48□□□□□ -0.25
APEX1-202ENST00000398030 GJB2P29033 226 aa13.48□□□□□ -0.25
APEX1-202ENST00000398030 INPP5BP32019 993 aa13.48□□□□□ -0.25
APEX1-202ENST00000398030 SLC4A3P48751 1232 aa13.48□□□□□ -0.25
APEX1-202ENST00000398030 PPATQ06203 517 aa13.48□□□□□ -0.25
APEX1-202ENST00000398030 USP17L2Q6R6M4 530 aa13.48□□□□□ -0.25
APEX1-202ENST00000398030 TMTC3Q6ZXV5 915 aa13.48□□□□□ -0.25
APEX1-202ENST00000398030 FAM160B2Q86V87 743 aa13.48□□□□□ -0.25
APEX1-202ENST00000398030 ERO1BQ86YB8 467 aa13.48□□□□□ -0.25
APEX1-202ENST00000398030 RAB11FIP4Q86YS3 637 aa13.48□□□□□ -0.25
APEX1-202ENST00000398030 CCDC12Q8WUD4 166 aaPredicted RBP13.48□□□□□ -0.25
APEX1-202ENST00000398030 RRP36Q96EU6 259 aaKnown RBP13.48□□□□□ -0.25
APEX1-202ENST00000398030 GMCL1Q96IK5 515 aa13.48□□□□□ -0.25
APEX1-202ENST00000398030 WDR18Q9BV38 432 aa13.48□□□□□ -0.25
APEX1-202ENST00000398030 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.48□□□□□ -0.25
APEX1-202ENST00000398030 KIAA1683Q9H0B3 1180 aa13.48□□□□□ -0.25
APEX1-202ENST00000398030 VCPKMTQ9H867 229 aa13.48□□□□□ -0.25
APEX1-202ENST00000398030 BRMS1Q9HCU9 246 aa13.48□□□□□ -0.25
APEX1-202ENST00000398030 CHMP5Q9NZZ3 219 aa13.48□□□□□ -0.25
APEX1-202ENST00000398030 PNMA2Q9UL42 364 aa13.48□□□□□ -0.25
APEX1-202ENST00000398030 ATP6V1DQ9Y5K8 247 aa13.48□□□□□ -0.25
APEX1-202ENST00000398030 KLRF2D3W0D1 207 aa13.47□□□□□ -0.25
APEX1-202ENST00000398030 F5H6K3 240 aa13.47□□□□□ -0.25
APEX1-202ENST00000398030 hCG_1984214I3L0E3 225 aa13.47□□□□□ -0.25
APEX1-202ENST00000398030 WDR46O15213 610 aaKnown RBP13.47□□□□□ -0.25
APEX1-202ENST00000398030 PDHBP11177 359 aa13.47□□□□□ -0.25
APEX1-202ENST00000398030 PTPRAP18433 802 aa13.47□□□□□ -0.25
APEX1-202ENST00000398030 KLRC3Q07444 240 aa13.47□□□□□ -0.25
APEX1-202ENST00000398030 PABPC4Q13310 644 aaKnown RBP eCLIP13.47□□□□□ -0.252e-8■■■□□ 18.9
APEX1-202ENST00000398030 GNL2Q13823 731 aaKnown RBP13.47□□□□□ -0.25
APEX1-202ENST00000398030 VGLL4Q14135 290 aa13.47□□□□□ -0.25
APEX1-202ENST00000398030 SAFBQ15424 915 aaKnown RBP eCLIP13.47□□□□□ -0.25
APEX1-202ENST00000398030 ZNF713Q8N859 430 aaPredicted RBP13.47□□□□□ -0.25
APEX1-202ENST00000398030 CHURC1Q8WUH1 139 aa13.47□□□□□ -0.25
APEX1-202ENST00000398030 ZKSCAN4Q969J2 545 aaPredicted RBP13.47□□□□□ -0.25
APEX1-202ENST00000398030 SLC10A4Q96EP9 437 aa13.47□□□□□ -0.25
APEX1-202ENST00000398030 SLC26A6Q9BXS9 759 aa13.47□□□□□ -0.25
APEX1-202ENST00000398030 NCOA5Q9HCD5 579 aaKnown RBP13.47□□□□□ -0.25
APEX1-202ENST00000398030 ORC3Q9UBD5 711 aaPredicted RBP13.47□□□□□ -0.25
APEX1-202ENST00000398030 HPS5Q9UPZ3 1129 aa13.47□□□□□ -0.25
APEX1-202ENST00000398030 ZHX2Q9Y6X8 837 aa13.47□□□□□ -0.25
APEX1-202ENST00000398030 WDR33Q9C0J8 1336 aaKnown RBP13.46□□□□□ -0.25
APEX1-202ENST00000398030 FMNL1O95466 1100 aaPredicted RBP13.46□□□□□ -0.25
APEX1-202ENST00000398030 GUCY1A2P33402 732 aa13.46□□□□□ -0.25
APEX1-202ENST00000398030 ZNF543Q08ER8 600 aa13.46□□□□□ -0.25
APEX1-202ENST00000398030 LARP1BQ659C4 914 aaKnown RBP13.46□□□□□ -0.25
APEX1-202ENST00000398030 FAM177A1Q8N128 213 aaPredicted RBP13.46□□□□□ -0.25
APEX1-202ENST00000398030 RGS22Q8NE09 1264 aa13.46□□□□□ -0.25
APEX1-202ENST00000398030 NSUN7Q8NE18 718 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms