RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 PLEKHA8P1O95397 391 aa22.65■■□□□ 1.22
PDLIM2-205ENST00000397761 SSRP1Q08945 709 aaKnown RBP22.65■■□□□ 1.22
PDLIM2-205ENST00000397761 USP50Q70EL3 339 aaPredicted RBP22.65■■□□□ 1.22
PDLIM2-205ENST00000397761 CABP5Q9NP86 173 aa22.65■■□□□ 1.22
PDLIM2-205ENST00000397761 CLIP2Q9UDT6 1046 aa22.65■■□□□ 1.22
PDLIM2-205ENST00000397761 CNTNAP5Q8WYK1 1306 aa22.64■■□□□ 1.22
PDLIM2-205ENST00000397761 GH2P01242 217 aa22.64■■□□□ 1.21
PDLIM2-205ENST00000397761 CAP2P40123 477 aa22.64■■□□□ 1.21
PDLIM2-205ENST00000397761 GNAQP50148 359 aa22.64■■□□□ 1.21
PDLIM2-205ENST00000397761 MIGA2Q7L4E1 593 aa22.64■■□□□ 1.21
PDLIM2-205ENST00000397761 TRIM22Q8IYM9 498 aa22.64■■□□□ 1.21
PDLIM2-205ENST00000397761 HOOK2Q96ED9 719 aa22.64■■□□□ 1.21
PDLIM2-205ENST00000397761 PHIPQ8WWQ0 1821 aa22.63■■□□□ 1.21
PDLIM2-205ENST00000397761 SSC5DA1L4H1 1573 aa22.63■■□□□ 1.21
PDLIM2-205ENST00000397761 PRPF3O43395 683 aaKnown RBP22.63■■□□□ 1.21
PDLIM2-205ENST00000397761 PPFIA3O75145 1194 aa22.63■■□□□ 1.21
PDLIM2-205ENST00000397761 F13A1P00488 732 aa22.63■■□□□ 1.21
PDLIM2-205ENST00000397761 EEF2P13639 858 aaKnown RBP22.63■■□□□ 1.21
PDLIM2-205ENST00000397761 ICA1Q05084 483 aa22.63■■□□□ 1.21
PDLIM2-205ENST00000397761 CDC37L1Q7L3B6 337 aa22.63■■□□□ 1.21
PDLIM2-205ENST00000397761 SRBD1Q8N5C6 995 aaKnown RBP22.63■■□□□ 1.21
PDLIM2-205ENST00000397761 LZTS2Q9BRK4 669 aa22.63■■□□□ 1.21
PDLIM2-205ENST00000397761 SLC26A6Q9BXS9 759 aa22.63■■□□□ 1.21
PDLIM2-205ENST00000397761 GINM1Q9NU53 330 aa22.63■■□□□ 1.21
PDLIM2-205ENST00000397761 ZBTB21Q9ULJ3 1066 aa22.63■■□□□ 1.21
PDLIM2-205ENST00000397761 VPS37CA5D8V6 355 aaPredicted RBP22.62■■□□□ 1.21
PDLIM2-205ENST00000397761 DEXIO95424 95 aa22.62■■□□□ 1.21
PDLIM2-205ENST00000397761 PDHBP11177 359 aa22.62■■□□□ 1.21
PDLIM2-205ENST00000397761 SMARCA1P28370 1054 aa22.62■■□□□ 1.21
PDLIM2-205ENST00000397761 NBPF12Q5TAG4 269 aaPredicted RBP22.62■■□□□ 1.21
PDLIM2-205ENST00000397761 CMTR1Q8N1G2 835 aaKnown RBP22.62■■□□□ 1.21
PDLIM2-205ENST00000397761 FBXO18Q8NFZ0 1043 aa22.62■■□□□ 1.21
PDLIM2-205ENST00000397761 ZC3H15Q8WU90 426 aaKnown RBP22.62■■□□□ 1.21
PDLIM2-205ENST00000397761 WASF1Q92558 559 aa22.62■■□□□ 1.21
PDLIM2-205ENST00000397761 POTECB2RU33 542 aa22.61■■□□□ 1.21
PDLIM2-205ENST00000397761 EPHX2P34913 555 aa22.61■■□□□ 1.21
PDLIM2-205ENST00000397761 DCAF15Q66K64 600 aa22.61■■□□□ 1.21
PDLIM2-205ENST00000397761 LRRC47Q8N1G4 583 aaKnown RBP22.61■■□□□ 1.21
PDLIM2-205ENST00000397761 STAG2Q8N3U4 1231 aa22.61■■□□□ 1.21
PDLIM2-205ENST00000397761 ZNF112Q9UJU3 913 aa22.61■■□□□ 1.21
PDLIM2-205ENST00000397761 OTOFQ9HC10 1997 aa22.61■■□□□ 1.21
PDLIM2-205ENST00000397761 IQCA1LA6NCM1 817 aa22.6■■□□□ 1.21
PDLIM2-205ENST00000397761 PARP1P09874 1014 aaKnown RBP22.6■■□□□ 1.21
PDLIM2-205ENST00000397761 NFKBIBQ15653 356 aa22.6■■□□□ 1.21
PDLIM2-205ENST00000397761 ASPRV1Q53RT3 343 aa22.6■■□□□ 1.21
PDLIM2-205ENST00000397761 GMCL1P1Q8NEA9 526 aa22.6■■□□□ 1.21
PDLIM2-205ENST00000397761 C8orf76Q96K31 380 aa22.6■■□□□ 1.21
PDLIM2-205ENST00000397761 ALG1Q9BT22 464 aa22.6■■□□□ 1.21
PDLIM2-205ENST00000397761 SPZ1Q9BXG8 430 aa22.6■■□□□ 1.21
PDLIM2-205ENST00000397761 RBM27Q9P2N5 1060 aaKnown RBP22.6■■□□□ 1.21
PDLIM2-205ENST00000397761 USP17L5A8MUK1 530 aa22.6■■□□□ 1.21
PDLIM2-205ENST00000397761 BAG4O95429 457 aaKnown RBP22.6■■□□□ 1.21
PDLIM2-205ENST00000397761 ASNSP08243 561 aa22.6■■□□□ 1.21
PDLIM2-205ENST00000397761 PKN1Q16512 942 aa22.6■■□□□ 1.21
PDLIM2-205ENST00000397761 SLC35G1Q2M3R5 365 aa22.6■■□□□ 1.21
PDLIM2-205ENST00000397761 AIFM3Q96NN9 605 aa22.6■■□□□ 1.21
PDLIM2-205ENST00000397761 GBP4Q96PP9 640 aa22.6■■□□□ 1.21
PDLIM2-205ENST00000397761 UBE2Q2LH0YL09 131 aa22.59■■□□□ 1.21
PDLIM2-205ENST00000397761 H3BQV1 296 aa22.59■■□□□ 1.21
PDLIM2-205ENST00000397761 CTNND1O60716 968 aaKnown RBP22.59■■□□□ 1.21
PDLIM2-205ENST00000397761 IFFO2Q5TF58 517 aa22.59■■□□□ 1.21
PDLIM2-205ENST00000397761 RASGRP2Q7LDG7 609 aa22.59■■□□□ 1.21
PDLIM2-205ENST00000397761 CCDC82Q8N4S0 544 aa22.59■■□□□ 1.21
PDLIM2-205ENST00000397761 DCPSQ96C86 337 aaKnown RBP22.59■■□□□ 1.21
PDLIM2-205ENST00000397761 ZNF341Q9BYN7 854 aa22.59■■□□□ 1.21
PDLIM2-205ENST00000397761 TAF1DQ9H5J8 278 aaPredicted RBP22.59■■□□□ 1.21
PDLIM2-205ENST00000397761 ATP6V1DQ9Y5K8 247 aa22.59■■□□□ 1.21
PDLIM2-205ENST00000397761 KLRF2D3W0D1 207 aa22.58■■□□□ 1.2
PDLIM2-205ENST00000397761 ZNF543Q08ER8 600 aa22.58■■□□□ 1.2
PDLIM2-205ENST00000397761 FOXD4L5Q5VV16 416 aaPredicted RBP22.58■■□□□ 1.2
PDLIM2-205ENST00000397761 USP17L2Q6R6M4 530 aa22.58■■□□□ 1.2
PDLIM2-205ENST00000397761 FOXD4L4Q8WXT5 416 aaPredicted RBP22.58■■□□□ 1.2
PDLIM2-205ENST00000397761 A0A1W2PRG0 241 aa22.57■■□□□ 1.2
PDLIM2-205ENST00000397761 CYTH3O43739 400 aa22.57■■□□□ 1.2
PDLIM2-205ENST00000397761 MCM4P33991 863 aa22.57■■□□□ 1.2
PDLIM2-205ENST00000397761 RESTQ13127 1097 aa22.57■■□□□ 1.2
PDLIM2-205ENST00000397761 SUPT20HL1Q3ZLR7 823 aa22.57■■□□□ 1.2
PDLIM2-205ENST00000397761 GPATCH4Q5T3I0 446 aaKnown RBP22.57■■□□□ 1.2
PDLIM2-205ENST00000397761 DCAF4Q8WV16 495 aa22.57■■□□□ 1.2
PDLIM2-205ENST00000397761 ZSCAN16Q9H4T2 348 aaPredicted RBP22.57■■□□□ 1.2
PDLIM2-205ENST00000397761 GPBP1L1Q9HC44 474 aaPredicted RBP22.57■■□□□ 1.2
PDLIM2-205ENST00000397761 ARHGEF10LQ9HCE6 1279 aa22.57■■□□□ 1.2
PDLIM2-205ENST00000397761 TMX2Q9Y320 296 aa22.57■■□□□ 1.2
PDLIM2-205ENST00000397761 V9GY48 417 aaPredicted RBP22.57■■□□□ 1.2
PDLIM2-205ENST00000397761 ATP2B2Q01814 1243 aa22.56■■□□□ 1.2
PDLIM2-205ENST00000397761 AKAP17AQ02040 695 aaKnown RBP22.56■■□□□ 1.2
PDLIM2-205ENST00000397761 SULF1Q8IWU6 871 aa22.56■■□□□ 1.2
PDLIM2-205ENST00000397761 GMCL1Q96IK5 515 aa22.56■■□□□ 1.2
PDLIM2-205ENST00000397761 RIOX1Q9H6W3 641 aa22.56■■□□□ 1.2
PDLIM2-205ENST00000397761 GOLGA8HP0CJ92 632 aa22.55■■□□□ 1.2
PDLIM2-205ENST00000397761 PFKFB3Q16875 520 aaPredicted RBP22.55■■□□□ 1.2
PDLIM2-205ENST00000397761 KRT40Q6A162 431 aa22.55■■□□□ 1.2
PDLIM2-205ENST00000397761 PNMA8AQ86V59 439 aaPredicted RBP22.55■■□□□ 1.2
PDLIM2-205ENST00000397761 GJB4Q9NTQ9 266 aa22.55■■□□□ 1.2
PDLIM2-205ENST00000397761 PTPRFP10586 1907 aa22.55■■□□□ 1.2
PDLIM2-205ENST00000397761 F5H6K3 240 aa22.54■■□□□ 1.2
PDLIM2-205ENST00000397761 KLRC3Q07444 240 aa22.54■■□□□ 1.2
PDLIM2-205ENST00000397761 PRAMEF18Q5VWM3 479 aa22.54■■□□□ 1.2
PDLIM2-205ENST00000397761 SLFN13Q68D06 897 aa22.54■■□□□ 1.2
PDLIM2-205ENST00000397761 FERMT3Q86UX7 667 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms