RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 NUP188Q5SRE5 1749 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 MYH15Q9Y2K3 1946 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 PLEKHA8P1O95397 391 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 VEGFAP15692 232 aaPredicted RBP5.68□□□□□ -1.5
SSR1-202ENST00000397511 AKAP17AQ02040 695 aaKnown RBP5.68□□□□□ -1.5
SSR1-202ENST00000397511 ZNF174Q15697 407 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 JMYQ8N9B5 988 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 KRI1Q8N9T8 703 aaKnown RBP5.68□□□□□ -1.5
SSR1-202ENST00000397511 SGSM3Q96HU1 749 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 TRAIPQ9BWF2 469 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 PARD6BQ9BYG5 372 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 NACAP1Q9BZK3 213 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 CSRNP2Q9H175 543 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 BLZF1Q9H2G9 400 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 TNKSO95271 1327 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 SOS2Q07890 1332 aaPredicted RBP5.68□□□□□ -1.5
SSR1-202ENST00000397511 PKD1L3Q7Z443 1732 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 A0A0U1RQJ8 604 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 ANKRD65E5RJM6 399 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 MAP2K7O14733 419 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 MMP1P03956 469 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 UQCRFS1P1P0C7P4 283 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 MTF1Q14872 753 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 KARSQ15046 597 aaKnown RBP5.68□□□□□ -1.5
SSR1-202ENST00000397511 LRRC31Q6UY01 552 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 GBP6Q6ZN66 633 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 ZNF654Q8IZM8 581 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 FANCBQ8NB91 859 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 ATRIPQ8WXE1 791 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 GOLGA1Q92805 767 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 TMEM87BQ96K49 555 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 PLIN2Q99541 437 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 PLA2G12BQ9BX93 195 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 PDE11AQ9HCR9 933 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 AATFQ9NY61 560 aaKnown RBP eCLIP5.68□□□□□ -1.5
SSR1-202ENST00000397511 AKAP11Q9UKA4 1901 aa5.68□□□□□ -1.5
SSR1-202ENST00000397511 LAMB4A4D0S4 1761 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 VWA3AA6NCI4 1184 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 ADAMTS3O15072 1205 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 FANCGO15287 622 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 ERLIN1O75477 346 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 ARID4AP29374 1257 aaPredicted RBP5.67□□□□□ -1.5
SSR1-202ENST00000397511 PPP2R3AQ06190 1150 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 PPARAQ07869 468 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 POSTNQ15063 836 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 RESP18Q5W5W9 173 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 CCDC125Q86Z20 511 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 MSL3Q8N5Y2 521 aaKnown RBP5.67□□□□□ -1.5
SSR1-202ENST00000397511 TBC1D22AQ8WUA7 517 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 STAG1Q8WVM7 1258 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 ACBD3Q9H3P7 528 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 LZTFL1Q9NQ48 299 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 LMTK3Q96Q04 1460 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 TAF1P21675 1872 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 A0A087X0B3 334 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 POTEB2H3BUK9 544 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 PES1O00541 588 aaKnown RBP5.67□□□□□ -1.5
SSR1-202ENST00000397511 MAFGO15525 162 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 FMNL1O95466 1100 aaPredicted RBP5.67□□□□□ -1.5
SSR1-202ENST00000397511 FGFR2P21802 821 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 HNRNPH1P31943 449 aaKnown RBP5.67□□□□□ -1.5
SSR1-202ENST00000397511 TXLNAP40222 546 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 ITPK1Q13572 414 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 MCM6Q14566 821 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 ERFEQ4G0M1 354 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 TOGARAM2Q6ZUX3 1019 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 PTF1AQ7RTS3 328 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 GPIHBP1Q8IV16 184 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 CRACR2BQ8N4Y2 399 aaPredicted RBP5.67□□□□□ -1.5
SSR1-202ENST00000397511 FAM71BQ8TC56 605 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 SHISA4Q96DD7 197 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 INTS13Q9NVM9 706 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 MAN1B1Q9UKM7 699 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 HPSEQ9Y251 543 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 FAN1Q9Y2M0 1017 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 PARP3Q9Y6F1 533 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 MROH5Q6ZUA9 1318 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 MAGEB6P1A0A0J9YX57 407 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 USP17L12C9JPN9 530 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 USP17L21D6R901 530 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 H0YHG0 523 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 TEX33O43247 280 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 ZSCAN12O43309 604 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 C21orf2O43822 256 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 PPP6R2O75170 966 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 TFRCP02786 760 aaKnown RBP5.67□□□□□ -1.5
SSR1-202ENST00000397511 CYP2D6P10635 497 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 CCT6AP40227 531 aaKnown RBP5.67□□□□□ -1.5
SSR1-202ENST00000397511 SSR1P43307 286 aaKnown RBP5.67□□□□□ -1.5
SSR1-202ENST00000397511 SARNPP82979 210 aaKnown RBP5.67□□□□□ -1.5
SSR1-202ENST00000397511 BIRC2Q13490 618 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 DDB1Q16531 1140 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 CCDC152Q4G0S7 254 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 IFIT1BQ5T764 474 aaKnown RBP5.67□□□□□ -1.5
SSR1-202ENST00000397511 RSRC2Q7L4I2 434 aaKnown RBP5.67□□□□□ -1.5
SSR1-202ENST00000397511 ZNF34Q8IZ26 560 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 FBXL16Q8N461 479 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 RASGRP4Q8TDF6 673 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 KRT23Q9C075 422 aa5.67□□□□□ -1.5
SSR1-202ENST00000397511 GNL3LQ9NVN8 582 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms