RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 A0A1B0GUL7 405 aa11.61□□□□□ -0.55
NEDD9-203ENST00000397378 PI4K2BG5E9Z4 385 aa11.61□□□□□ -0.55
NEDD9-203ENST00000397378 PGK1P00558 417 aa11.61□□□□□ -0.55
NEDD9-203ENST00000397378 RARBP10826 455 aa11.61□□□□□ -0.55
NEDD9-203ENST00000397378 CSF2RAP15509 400 aa11.61□□□□□ -0.55
NEDD9-203ENST00000397378 ADORA2AP29274 412 aa11.61□□□□□ -0.55
NEDD9-203ENST00000397378 ZYXQ15942 572 aaKnown RBP11.61□□□□□ -0.55
NEDD9-203ENST00000397378 USP17L2Q6R6M4 530 aa11.61□□□□□ -0.55
NEDD9-203ENST00000397378 C16orf59Q7L2K0 433 aa11.61□□□□□ -0.55
NEDD9-203ENST00000397378 TMEM199Q8N511 208 aa11.61□□□□□ -0.55
NEDD9-203ENST00000397378 NSUN4Q96CB9 384 aaKnown RBP11.61□□□□□ -0.55
NEDD9-203ENST00000397378 MTIF3Q9H2K0 278 aaKnown RBP11.61□□□□□ -0.55
NEDD9-203ENST00000397378 GINM1Q9NU53 330 aa11.61□□□□□ -0.55
NEDD9-203ENST00000397378 PI4KBQ9UBF8 816 aa11.61□□□□□ -0.55
NEDD9-203ENST00000397378 COG5Q9UP83 839 aa11.61□□□□□ -0.55
NEDD9-203ENST00000397378 CHD7Q9P2D1 2997 aa11.61□□□□□ -0.55
NEDD9-203ENST00000397378 MYH1P12882 1939 aa11.6□□□□□ -0.55
NEDD9-203ENST00000397378 USP17L15C9J2P7 530 aa11.6□□□□□ -0.55
NEDD9-203ENST00000397378 USP17L13C9JLJ4 530 aa11.6□□□□□ -0.55
NEDD9-203ENST00000397378 USP17L11C9JVI0 530 aa11.6□□□□□ -0.55
NEDD9-203ENST00000397378 USP17L18D6R9N7 530 aa11.6□□□□□ -0.55
NEDD9-203ENST00000397378 USP17L22D6RA61 530 aa11.6□□□□□ -0.55
NEDD9-203ENST00000397378 USP17L17D6RBQ6 530 aa11.6□□□□□ -0.55
NEDD9-203ENST00000397378 USP17L19D6RCP7 530 aa11.6□□□□□ -0.55
NEDD9-203ENST00000397378 USP17L20D6RJB6 530 aa11.6□□□□□ -0.55
NEDD9-203ENST00000397378 E9PSI1 815 aa11.6□□□□□ -0.55
NEDD9-203ENST00000397378 ANP32CO43423 234 aa11.6□□□□□ -0.55
NEDD9-203ENST00000397378 GTPBP6O43824 516 aaPredicted RBP11.6□□□□□ -0.55
NEDD9-203ENST00000397378 GDF11O95390 407 aa11.6□□□□□ -0.55
NEDD9-203ENST00000397378 IGHA2P01877 340 aa11.6□□□□□ -0.55
NEDD9-203ENST00000397378 JAG1P78504 1218 aa11.6□□□□□ -0.55
NEDD9-203ENST00000397378 USP17L24Q0WX57 530 aa11.6□□□□□ -0.55
NEDD9-203ENST00000397378 CSPP1Q1MSJ5 1256 aa11.6□□□□□ -0.55
NEDD9-203ENST00000397378 SHROOM1Q2M3G4 852 aaPredicted RBP11.6□□□□□ -0.55
NEDD9-203ENST00000397378 ANKRD33Q7Z3H0 272 aa11.6□□□□□ -0.55
NEDD9-203ENST00000397378 METTL16Q86W50 562 aaKnown RBP11.6□□□□□ -0.55
NEDD9-203ENST00000397378 TEX11Q8IYF3 940 aa11.6□□□□□ -0.55
NEDD9-203ENST00000397378 TOX2Q96NM4 488 aa11.6□□□□□ -0.55
NEDD9-203ENST00000397378 TRIM34Q9BYJ4 488 aa11.6□□□□□ -0.55
NEDD9-203ENST00000397378 DHX36Q9H2U1 1008 aaKnown RBP11.6□□□□□ -0.55
NEDD9-203ENST00000397378 STARD7Q9NQZ5 370 aa11.6□□□□□ -0.55
NEDD9-203ENST00000397378 EMILIN3Q9NT22 766 aa11.6□□□□□ -0.55
NEDD9-203ENST00000397378 HMG20BQ9P0W2 317 aa11.6□□□□□ -0.55
NEDD9-203ENST00000397378 BTBD7Q9P203 1132 aa11.6□□□□□ -0.55
NEDD9-203ENST00000397378 FAM9BQ8IZU0 186 aa11.59□□□□□ -0.55
NEDD9-203ENST00000397378 SPATA5Q8NB90 893 aa11.59□□□□□ -0.55
NEDD9-203ENST00000397378 FBXL18Q96ME1 805 aa11.59□□□□□ -0.55
NEDD9-203ENST00000397378 FEZ1Q99689 392 aa11.59□□□□□ -0.55
NEDD9-203ENST00000397378 PPP1R12CQ9BZL4 782 aa11.59□□□□□ -0.55
NEDD9-203ENST00000397378 TBX21Q9UL17 535 aa11.59□□□□□ -0.55
NEDD9-203ENST00000397378 RFXAPO00287 272 aa11.58□□□□□ -0.56
NEDD9-203ENST00000397378 ARID4AP29374 1257 aaPredicted RBP11.58□□□□□ -0.56
NEDD9-203ENST00000397378 RABGGTBP53611 331 aa11.58□□□□□ -0.56
NEDD9-203ENST00000397378 TFCP2Q12800 502 aa11.58□□□□□ -0.56
NEDD9-203ENST00000397378 TBC1D9Q6ZT07 1266 aa11.58□□□□□ -0.56
NEDD9-203ENST00000397378 FOXP4Q8IVH2 680 aaPredicted RBP11.58□□□□□ -0.56
NEDD9-203ENST00000397378 CRACR2BQ8N4Y2 399 aaPredicted RBP11.58□□□□□ -0.56
NEDD9-203ENST00000397378 NUP133Q8WUM0 1156 aa11.58□□□□□ -0.56
NEDD9-203ENST00000397378 HLA-CQ95604 372 aa11.58□□□□□ -0.56
NEDD9-203ENST00000397378 DNAJC18Q9H819 358 aa11.58□□□□□ -0.56
NEDD9-203ENST00000397378 CD320Q9NPF0 282 aa11.58□□□□□ -0.56
NEDD9-203ENST00000397378 SMC4Q9NTJ3 1288 aa11.58□□□□□ -0.56
NEDD9-203ENST00000397378 SLC5A4Q9NY91 659 aa11.58□□□□□ -0.56
NEDD9-203ENST00000397378 ZBTB21Q9ULJ3 1066 aa11.58□□□□□ -0.56
NEDD9-203ENST00000397378 MTCH2Q9Y6C9 303 aa11.58□□□□□ -0.56
NEDD9-203ENST00000397378 SMCHD1A6NHR9 2005 aa11.58□□□□□ -0.56
NEDD9-203ENST00000397378 WDFY4Q6ZS81 3184 aa11.57□□□□□ -0.56
NEDD9-203ENST00000397378 STRNO43815 780 aa11.57□□□□□ -0.56
NEDD9-203ENST00000397378 PLCG2P16885 1265 aa11.57□□□□□ -0.56
NEDD9-203ENST00000397378 SLFN5Q08AF3 891 aa11.57□□□□□ -0.56
NEDD9-203ENST00000397378 MTX1Q13505 466 aa11.57□□□□□ -0.56
NEDD9-203ENST00000397378 PI16Q6UXB8 463 aa11.57□□□□□ -0.56
NEDD9-203ENST00000397378 CATSPERGQ6ZRH7 1159 aa11.57□□□□□ -0.56
NEDD9-203ENST00000397378 SH3RF3Q8TEJ3 882 aaPredicted RBP11.57□□□□□ -0.56
NEDD9-203ENST00000397378 NEUROD6Q96NK8 337 aa11.57□□□□□ -0.56
NEDD9-203ENST00000397378 NOL10Q9BSC4 688 aaKnown RBP11.57□□□□□ -0.56
NEDD9-203ENST00000397378 RAI14Q9P0K7 980 aa11.57□□□□□ -0.56
NEDD9-203ENST00000397378 A0A0G2JMZ2 1700 aa11.57□□□□□ -0.56
NEDD9-203ENST00000397378 MROH7Q68CQ1 1323 aa11.57□□□□□ -0.56
NEDD9-203ENST00000397378 ZNFX1Q9P2E3 1918 aaKnown RBP11.56□□□□□ -0.56
NEDD9-203ENST00000397378 PRRC2BQ5JSZ5 2229 aaKnown RBP11.56□□□□□ -0.56
NEDD9-203ENST00000397378 COBLO75128 1261 aa11.56□□□□□ -0.56
NEDD9-203ENST00000397378 BAG3O95817 575 aa11.56□□□□□ -0.56
NEDD9-203ENST00000397378 FGBP02675 491 aa11.56□□□□□ -0.56
NEDD9-203ENST00000397378 MYOGP15173 224 aa11.56□□□□□ -0.56
NEDD9-203ENST00000397378 MCAMP43121 646 aa11.56□□□□□ -0.56
NEDD9-203ENST00000397378 ACLYP53396 1101 aa11.56□□□□□ -0.56
NEDD9-203ENST00000397378 PPP4CP60510 307 aa11.56□□□□□ -0.56
NEDD9-203ENST00000397378 LBX2Q6XYB7 198 aa11.56□□□□□ -0.56
NEDD9-203ENST00000397378 OTOP2Q7RTS6 562 aa11.56□□□□□ -0.56
NEDD9-203ENST00000397378 LENG1Q96BZ8 264 aaPredicted RBP11.56□□□□□ -0.56
NEDD9-203ENST00000397378 MEIS3Q99687 375 aa11.56□□□□□ -0.56
NEDD9-203ENST00000397378 MOV10L1Q9BXT6 1211 aaKnown RBP11.56□□□□□ -0.56
NEDD9-203ENST00000397378 API5Q9BZZ5 524 aaKnown RBP11.56□□□□□ -0.56
NEDD9-203ENST00000397378 KCNH6Q9H252 994 aa11.56□□□□□ -0.56
NEDD9-203ENST00000397378 CERS4Q9HA82 394 aa11.56□□□□□ -0.56
NEDD9-203ENST00000397378 IL23AQ9NPF7 189 aa11.56□□□□□ -0.56
NEDD9-203ENST00000397378 LRP2BPQ9P2M1 347 aa11.56□□□□□ -0.56
NEDD9-203ENST00000397378 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.56□□□□□ -0.56
NEDD9-203ENST00000397378 CACNA1AO00555 2505 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms