RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 TMED8Q6PL24 325 aaPredicted RBP10.7□□□□□ -0.7
CAPN3-208ENST00000397204 USP17L2Q6R6M4 530 aa10.7□□□□□ -0.7
CAPN3-208ENST00000397204 PLEKHH3Q7Z736 793 aa10.7□□□□□ -0.7
CAPN3-208ENST00000397204 C7orf61Q8IZ16 206 aa10.7□□□□□ -0.7
CAPN3-208ENST00000397204 LRCH3Q96II8 777 aa10.7□□□□□ -0.7
CAPN3-208ENST00000397204 DBNDD2Q9BQY9 259 aa10.7□□□□□ -0.7
CAPN3-208ENST00000397204 DNAJC18Q9H819 358 aa10.7□□□□□ -0.7
CAPN3-208ENST00000397204 TXNRD2Q9NNW7 524 aa10.7□□□□□ -0.7
CAPN3-208ENST00000397204 ZBTB21Q9ULJ3 1066 aa10.7□□□□□ -0.7
CAPN3-208ENST00000397204 LAMA2P24043 3122 aaKnown RBP10.7□□□□□ -0.7
CAPN3-208ENST00000397204 DOCK2Q92608 1830 aa10.7□□□□□ -0.7
CAPN3-208ENST00000397204 USP17L15C9J2P7 530 aa10.69□□□□□ -0.7
CAPN3-208ENST00000397204 USP17L13C9JLJ4 530 aa10.69□□□□□ -0.7
CAPN3-208ENST00000397204 USP17L11C9JVI0 530 aa10.69□□□□□ -0.7
CAPN3-208ENST00000397204 USP17L18D6R9N7 530 aa10.69□□□□□ -0.7
CAPN3-208ENST00000397204 USP17L22D6RA61 530 aa10.69□□□□□ -0.7
CAPN3-208ENST00000397204 USP17L17D6RBQ6 530 aa10.69□□□□□ -0.7
CAPN3-208ENST00000397204 USP17L19D6RCP7 530 aa10.69□□□□□ -0.7
CAPN3-208ENST00000397204 USP17L20D6RJB6 530 aa10.69□□□□□ -0.7
CAPN3-208ENST00000397204 TK2O00142 265 aa10.69□□□□□ -0.7
CAPN3-208ENST00000397204 SURF6O75683 361 aaKnown RBP10.69□□□□□ -0.7
CAPN3-208ENST00000397204 BCAR3O75815 825 aa10.69□□□□□ -0.7
CAPN3-208ENST00000397204 GLRX3O76003 335 aaKnown RBP10.69□□□□□ -0.7
CAPN3-208ENST00000397204 RGS2P41220 211 aa10.69□□□□□ -0.7
CAPN3-208ENST00000397204 CCNA1P78396 465 aa10.69□□□□□ -0.7
CAPN3-208ENST00000397204 CACNB2Q08289 660 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-208ENST00000397204 USP17L24Q0WX57 530 aa10.69□□□□□ -0.7
CAPN3-208ENST00000397204 LRIT3Q3SXY7 679 aa10.69□□□□□ -0.7
CAPN3-208ENST00000397204 MORN1Q5T089 497 aa10.69□□□□□ -0.7
CAPN3-208ENST00000397204 ADGRA1Q86SQ6 560 aa10.69□□□□□ -0.7
CAPN3-208ENST00000397204 CLUAP1Q96AJ1 413 aa10.69□□□□□ -0.7
CAPN3-208ENST00000397204 ZMYND8Q9ULU4 1186 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-208ENST00000397204 NOP58Q9Y2X3 529 aaKnown RBP10.69□□□□□ -0.7
CAPN3-208ENST00000397204 RABGAP1Q9Y3P9 1069 aa10.69□□□□□ -0.7
CAPN3-208ENST00000397204 DOCK1Q14185 1865 aa10.69□□□□□ -0.7
CAPN3-208ENST00000397204 PHIPQ8WWQ0 1821 aa10.69□□□□□ -0.7
CAPN3-208ENST00000397204 PTPRFP10586 1907 aa10.68□□□□□ -0.7
CAPN3-208ENST00000397204 DLL1O00548 723 aa10.68□□□□□ -0.7
CAPN3-208ENST00000397204 GDF11O95390 407 aa10.68□□□□□ -0.7
CAPN3-208ENST00000397204 COL6A1P12109 1028 aa10.68□□□□□ -0.7
CAPN3-208ENST00000397204 ZKSCAN1P17029 563 aaPredicted RBP10.68□□□□□ -0.7
CAPN3-208ENST00000397204 COL9A1P20849 921 aa10.68□□□□□ -0.7
CAPN3-208ENST00000397204 CYP7A1P22680 504 aa10.68□□□□□ -0.7
CAPN3-208ENST00000397204 ZAP70P43403 619 aa10.68□□□□□ -0.7
CAPN3-208ENST00000397204 USP14P54578 494 aa10.68□□□□□ -0.7
CAPN3-208ENST00000397204 DYNLL1P63167 89 aaKnown RBP10.68□□□□□ -0.7
CAPN3-208ENST00000397204 C6orf132Q5T0Z8 1188 aa10.68□□□□□ -0.7
CAPN3-208ENST00000397204 ZKSCAN2Q63HK3 967 aa10.68□□□□□ -0.7
CAPN3-208ENST00000397204 TATDN1Q6P1N9 297 aa10.68□□□□□ -0.7
CAPN3-208ENST00000397204 GPR142Q7Z601 462 aa10.68□□□□□ -0.7
CAPN3-208ENST00000397204 TMEM57Q8N5G2 664 aa10.68□□□□□ -0.7
CAPN3-208ENST00000397204 EDC3Q96F86 508 aaKnown RBP10.68□□□□□ -0.7
CAPN3-208ENST00000397204 C12orf42Q96LP6 360 aa10.68□□□□□ -0.7
CAPN3-208ENST00000397204 PORCNQ9H237 461 aa10.68□□□□□ -0.7
CAPN3-208ENST00000397204 PIH1D3Q9NQM4 214 aaKnown RBP10.68□□□□□ -0.7
CAPN3-208ENST00000397204 SAP30BPQ9UHR5 308 aaKnown RBP10.68□□□□□ -0.7
CAPN3-208ENST00000397204 TNNQ9UQP3 1299 aa10.68□□□□□ -0.7
CAPN3-208ENST00000397204 PEX10O60683 326 aa10.67□□□□□ -0.7
CAPN3-208ENST00000397204 GH2P01242 217 aa10.67□□□□□ -0.7
CAPN3-208ENST00000397204 MAGEA10P43363 369 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-208ENST00000397204 MFSD14CQ5VZR4 134 aa10.67□□□□□ -0.7
CAPN3-208ENST00000397204 CATSPERGQ6ZRH7 1159 aa10.67□□□□□ -0.7
CAPN3-208ENST00000397204 TTC6Q86TZ1 520 aa10.67□□□□□ -0.7
CAPN3-208ENST00000397204 TDHQ8IZJ6 230 aa10.67□□□□□ -0.7
CAPN3-208ENST00000397204 PAGR1Q9BTK6 254 aa10.67□□□□□ -0.7
CAPN3-208ENST00000397204 ZBED2Q9BTP6 218 aa10.67□□□□□ -0.7
CAPN3-208ENST00000397204 KIAA1683Q9H0B3 1180 aa10.67□□□□□ -0.7
CAPN3-208ENST00000397204 EHD4Q9H223 541 aa10.67□□□□□ -0.7
CAPN3-208ENST00000397204 CWC22Q9HCG8 908 aaKnown RBP10.67□□□□□ -0.7
CAPN3-208ENST00000397204 SERPINB13Q9UIV8 391 aa10.67□□□□□ -0.7
CAPN3-208ENST00000397204 DBNLQ9UJU6 430 aaKnown RBP10.67□□□□□ -0.7
CAPN3-208ENST00000397204 VPS9D1Q9Y2B5 631 aa10.67□□□□□ -0.7
CAPN3-208ENST00000397204 PFASO15067 1338 aa10.66□□□□□ -0.7
CAPN3-208ENST00000397204 SLC15A5A6NIM6 579 aa10.66□□□□□ -0.7
CAPN3-208ENST00000397204 PPP1R3GB7ZBB8 358 aa10.66□□□□□ -0.7
CAPN3-208ENST00000397204 MAP3K7O43318 606 aa10.66□□□□□ -0.7
CAPN3-208ENST00000397204 IDH1O75874 414 aaKnown RBP10.66□□□□□ -0.7
CAPN3-208ENST00000397204 SYN1P17600 705 aa10.66□□□□□ -0.7
CAPN3-208ENST00000397204 USP5P45974 858 aa10.66□□□□□ -0.7
CAPN3-208ENST00000397204 MAP3K12Q12852 859 aa10.66□□□□□ -0.7
CAPN3-208ENST00000397204 MAP2K5Q13163 448 aa10.66□□□□□ -0.7
CAPN3-208ENST00000397204 CCL14Q16627 93 aa10.66□□□□□ -0.7
CAPN3-208ENST00000397204 SHROOM1Q2M3G4 852 aaPredicted RBP10.66□□□□□ -0.7
CAPN3-208ENST00000397204 CERKLQ49MI3 558 aaPredicted RBP10.66□□□□□ -0.7
CAPN3-208ENST00000397204 LBX2Q6XYB7 198 aa10.66□□□□□ -0.7
CAPN3-208ENST00000397204 DEFB123Q8N688 67 aa10.66□□□□□ -0.7
CAPN3-208ENST00000397204 APBA2Q99767 749 aa10.66□□□□□ -0.7
CAPN3-208ENST00000397204 UBE2OQ9C0C9 1292 aaKnown RBP10.66□□□□□ -0.7
CAPN3-208ENST00000397204 CCDC8Q9H0W5 538 aaPredicted RBP10.66□□□□□ -0.7
CAPN3-208ENST00000397204 CABP5Q9NP86 173 aa10.66□□□□□ -0.7
CAPN3-208ENST00000397204 HRO43593 1189 aa10.65□□□□□ -0.7
CAPN3-208ENST00000397204 MSCO60682 206 aa10.65□□□□□ -0.7
CAPN3-208ENST00000397204 CNMDO75829 334 aa10.65□□□□□ -0.7
CAPN3-208ENST00000397204 HOXC6P09630 235 aa10.65□□□□□ -0.7
CAPN3-208ENST00000397204 CCND3P30281 292 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-208ENST00000397204 MLLT3P42568 568 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-208ENST00000397204 ATP2B2Q01814 1243 aa10.65□□□□□ -0.7
CAPN3-208ENST00000397204 ABCB5Q2M3G0 1257 aa10.65□□□□□ -0.7
CAPN3-208ENST00000397204 TSR1Q2NL82 804 aaKnown RBP10.65□□□□□ -0.7
CAPN3-208ENST00000397204 MIGA1Q8NAN2 632 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms