RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 FAM102BQ5T8I3 360 aa13.57□□□□□ -0.24
SMU1-201ENST00000397149 NLRC4Q9NPP4 1024 aa13.57□□□□□ -0.24
SMU1-201ENST00000397149 H0YC42 278 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 SERPINI2O75830 405 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 KLHL30Q0D2K2 578 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 RPS6KA1Q15418 735 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 ZNF449Q6P9G9 518 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 XAGE3Q8WTP9 111 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 SLC4A7Q9Y6M7 1214 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 P4HA1P13674 534 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 SLFN5Q08AF3 891 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 HACD3Q9P035 362 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 BCRP11274 1271 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 CYP2J2P51589 502 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 PUM3Q15397 648 aaKnown RBP13.56□□□□□ -0.24
SMU1-201ENST00000397149 TYW1BQ6NUM6 668 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 TAB2Q9NYJ8 693 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 CHPF2Q9P2E5 772 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 PPFIA4O75335 1185 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 PHBP35232 272 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 KLHL40Q2TBA0 621 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 NBPF14Q5TI25 921 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 U2AF1L4Q8WU68 220 aaKnown RBP13.56□□□□□ -0.24
SMU1-201ENST00000397149 P3H4Q92791 437 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 CCDC124Q96CT7 223 aaKnown RBP13.56□□□□□ -0.24
SMU1-201ENST00000397149 DPH5Q9H2P9 285 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 ARHGAP25P42331 645 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 TPH2Q8IWU9 490 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 N4BP2L2Q92802 583 aaPredicted RBP13.56□□□□□ -0.24
SMU1-201ENST00000397149 SH2D4AQ9H788 454 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 RIC8AQ9NPQ8 531 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 OGFRQ9NZT2 677 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 PCDHB13Q9Y5F0 798 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 POC1B-GALNT4F8VUJ3 575 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 SNRPA1P09661 255 aaKnown RBP13.56□□□□□ -0.24
SMU1-201ENST00000397149 PLCG2P16885 1265 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 KRT80Q6KB66 452 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 RHPN1Q8TCX5 695 aa13.56□□□□□ -0.24
SMU1-201ENST00000397149 IPO11Q9UI26 975 aaKnown RBP13.56□□□□□ -0.24
SMU1-201ENST00000397149 FLOT2Q14254 428 aa13.55□□□□□ -0.24
SMU1-201ENST00000397149 HOOK2Q96ED9 719 aa13.55□□□□□ -0.24
SMU1-201ENST00000397149 ZFYVE19Q96K21 471 aa13.55□□□□□ -0.24
SMU1-201ENST00000397149 POLR2DO15514 142 aaKnown RBP13.55□□□□□ -0.24
SMU1-201ENST00000397149 RAB44Q7Z6P3 723 aaPredicted RBP13.55□□□□□ -0.24
SMU1-201ENST00000397149 CTNNA1P35221 906 aaKnown RBP13.55□□□□□ -0.24
SMU1-201ENST00000397149 MAGEA1P43355 309 aa13.55□□□□□ -0.24
SMU1-201ENST00000397149 COPS6Q7L5N1 327 aa13.55□□□□□ -0.24
SMU1-201ENST00000397149 ZNF513Q8N8E2 541 aaPredicted RBP13.55□□□□□ -0.24
SMU1-201ENST00000397149 RARSP54136 660 aaKnown RBP13.55□□□□□ -0.24
SMU1-201ENST00000397149 UBE3AQ05086 875 aa13.55□□□□□ -0.24
SMU1-201ENST00000397149 TCIRG1Q13488 830 aa13.55□□□□□ -0.24
SMU1-201ENST00000397149 KRT28Q7Z3Y7 464 aa13.55□□□□□ -0.24
SMU1-201ENST00000397149 STAMQ92783 540 aa13.55□□□□□ -0.24
SMU1-201ENST00000397149 SYTL2Q9HCH5 934 aa13.55□□□□□ -0.24
SMU1-201ENST00000397149 INTUQ9ULD6 942 aa13.55□□□□□ -0.24
SMU1-201ENST00000397149 EVI5O60447 810 aa13.55□□□□□ -0.24
SMU1-201ENST00000397149 HAUS3Q68CZ6 603 aa13.55□□□□□ -0.24
SMU1-201ENST00000397149 TMCO5AQ8N6Q1 288 aa13.55□□□□□ -0.24
SMU1-201ENST00000397149 FAM8A1Q9UBU6 413 aa13.55□□□□□ -0.24
SMU1-201ENST00000397149 DHX29Q7Z478 1369 aaKnown RBP13.55□□□□□ -0.24
SMU1-201ENST00000397149 H7C0C1 242 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 ZBED4O75132 1171 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 ATP5OP48047 213 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 TUBB4BP68371 445 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 RASEFQ8IZ41 740 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 FBXL13Q8NEE6 735 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 PPHLN1Q8NEY8 458 aaKnown RBP13.54□□□□□ -0.24
SMU1-201ENST00000397149 LZICQ8WZA0 190 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 TRAIPQ9BWF2 469 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 ARHGAP5Q13017 1502 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 THAP12O43422 761 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 ELF2Q15723 593 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 SNX29Q8TEQ0 813 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 BTN2A2Q8WVV5 523 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 OTULINQ96BN8 352 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 LMNB1P20700 586 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 PAK2Q13177 524 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 EXT2Q93063 718 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 DACH2Q96NX9 599 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 SLF1Q9BQI6 1058 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 SDSP20132 328 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 STX1BP61266 288 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 KRT27Q7Z3Y8 459 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 DEPTORQ8TB45 409 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 ARHGEF1Q92888 912 aaKnown RBP13.54□□□□□ -0.24
SMU1-201ENST00000397149 PTPN22Q9Y2R2 807 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 TOP2AP11388 1531 aaKnown RBP13.54□□□□□ -0.24
SMU1-201ENST00000397149 SYNRGQ9UMZ2 1314 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 MYL5Q02045 173 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 ZNF467Q7Z7K2 595 aaPredicted RBP13.54□□□□□ -0.24
SMU1-201ENST00000397149 FAM207AQ9NSI2 230 aaPredicted RBP13.54□□□□□ -0.24
SMU1-201ENST00000397149 DNM3Q9UQ16 869 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 CCDC61Q9Y6R9 512 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 YWHAGP61981 247 aaKnown RBP eCLIP13.54□□□□□ -0.24
SMU1-201ENST00000397149 PDE1BQ01064 536 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 PRPSAP1Q14558 356 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 ANKRD20A4Q4UJ75 823 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 ANKRD20A8PQ5CZ79 823 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 ANKRD20A2Q5SQ80 823 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 ANKRD20A1Q5TYW2 823 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms