RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 SPA17Q15506 151 aa16.58■□□□□ 0.24
RAPGEF4-201ENST00000397081 CYP26C1Q6V0L0 522 aa16.58■□□□□ 0.24
RAPGEF4-201ENST00000397081 DZIP3Q86Y13 1208 aaKnown RBP16.58■□□□□ 0.24
RAPGEF4-201ENST00000397081 CCDC47Q96A33 483 aaKnown RBP16.58■□□□□ 0.24
RAPGEF4-201ENST00000397081 PAGE5Q96GU1 130 aa16.58■□□□□ 0.24
RAPGEF4-201ENST00000397081 TTF2Q9UNY4 1162 aaKnown RBP16.58■□□□□ 0.24
RAPGEF4-201ENST00000397081 HPSEQ9Y251 543 aa16.58■□□□□ 0.24
RAPGEF4-201ENST00000397081 KCNJ18B7U540 433 aa16.58■□□□□ 0.24
RAPGEF4-201ENST00000397081 ZEB2O60315 1214 aa16.58■□□□□ 0.24
RAPGEF4-201ENST00000397081 IFNAR1P17181 557 aa16.58■□□□□ 0.24
RAPGEF4-201ENST00000397081 MORC3Q14149 939 aa16.58■□□□□ 0.24
RAPGEF4-201ENST00000397081 KCNJ12Q14500 433 aa16.58■□□□□ 0.24
RAPGEF4-201ENST00000397081 TDRD12Q587J7 1177 aaKnown RBP16.58■□□□□ 0.24
RAPGEF4-201ENST00000397081 FBXO2Q9UK22 296 aaPredicted RBP16.58■□□□□ 0.24
RAPGEF4-201ENST00000397081 STX8Q9UNK0 236 aa16.58■□□□□ 0.24
RAPGEF4-201ENST00000397081 HEG1Q9ULI3 1381 aa16.57■□□□□ 0.24
RAPGEF4-201ENST00000397081 CD44P16070 742 aaKnown RBP16.57■□□□□ 0.24
RAPGEF4-201ENST00000397081 CTSWP56202 376 aa16.57■□□□□ 0.24
RAPGEF4-201ENST00000397081 ZBTB38Q8NAP3 1195 aaPredicted RBP16.57■□□□□ 0.24
RAPGEF4-201ENST00000397081 MAP3K14Q99558 947 aa16.57■□□□□ 0.24
RAPGEF4-201ENST00000397081 SOS2Q07890 1332 aaPredicted RBP16.57■□□□□ 0.24
RAPGEF4-201ENST00000397081 MYO1BO43795 1136 aa16.57■□□□□ 0.24
RAPGEF4-201ENST00000397081 MFAP3LO75121 409 aa16.57■□□□□ 0.24
RAPGEF4-201ENST00000397081 KRT31Q15323 416 aa16.57■□□□□ 0.24
RAPGEF4-201ENST00000397081 PUM3Q15397 648 aaKnown RBP16.57■□□□□ 0.24
RAPGEF4-201ENST00000397081 PTPROQ16827 1216 aa16.57■□□□□ 0.24
RAPGEF4-201ENST00000397081 FOXR1Q6PIV2 292 aa16.57■□□□□ 0.24
RAPGEF4-201ENST00000397081 CRACR2BQ8N4Y2 399 aaPredicted RBP16.57■□□□□ 0.24
RAPGEF4-201ENST00000397081 GPKOWQ92917 476 aaPredicted RBP eCLIP16.57■□□□□ 0.24
RAPGEF4-201ENST00000397081 FEZ2Q9UHY8 353 aaPredicted RBP16.57■□□□□ 0.24
RAPGEF4-201ENST00000397081 FAM208AQ9UK61 1670 aaKnown RBP16.57■□□□□ 0.24
RAPGEF4-201ENST00000397081 CXCR5P32302 372 aa16.57■□□□□ 0.24
RAPGEF4-201ENST00000397081 SF3A3Q12874 501 aaKnown RBP eCLIP16.57■□□□□ 0.24
RAPGEF4-201ENST00000397081 TMTC1Q8IUR5 882 aa16.57■□□□□ 0.24
RAPGEF4-201ENST00000397081 MMRN2Q9H8L6 949 aa16.57■□□□□ 0.24
RAPGEF4-201ENST00000397081 FOXP2O15409 715 aa16.56■□□□□ 0.24
RAPGEF4-201ENST00000397081 GYG1P46976 350 aa16.56■□□□□ 0.24
RAPGEF4-201ENST00000397081 MAP9Q49MG5 647 aa16.56■□□□□ 0.24
RAPGEF4-201ENST00000397081 NFAT5O94916 1531 aa16.56■□□□□ 0.24
RAPGEF4-201ENST00000397081 LTN1O94822 1766 aa16.56■□□□□ 0.24
RAPGEF4-201ENST00000397081 MAGEB6P1A0A0J9YX57 407 aa16.56■□□□□ 0.24
RAPGEF4-201ENST00000397081 AKR1B10O60218 316 aa16.56■□□□□ 0.24
RAPGEF4-201ENST00000397081 CUL4BQ13620 913 aa16.56■□□□□ 0.24
RAPGEF4-201ENST00000397081 GOLGA5Q8TBA6 731 aa16.56■□□□□ 0.24
RAPGEF4-201ENST00000397081 EPN1Q9Y6I3 576 aaPredicted RBP16.56■□□□□ 0.24
RAPGEF4-201ENST00000397081 DCCP43146 1447 aa16.56■□□□□ 0.24
RAPGEF4-201ENST00000397081 PPARAQ07869 468 aa16.56■□□□□ 0.24
RAPGEF4-201ENST00000397081 AFAP1L1Q8TED9 768 aa16.56■□□□□ 0.24
RAPGEF4-201ENST00000397081 SRPRBQ9Y5M8 271 aaKnown RBP16.56■□□□□ 0.24
RAPGEF4-201ENST00000397081 IVLP07476 585 aa16.56■□□□□ 0.24
RAPGEF4-201ENST00000397081 TBC1D8BQ0IIM8 1120 aa16.56■□□□□ 0.24
RAPGEF4-201ENST00000397081 HEATR3Q7Z4Q2 680 aa16.56■□□□□ 0.24
RAPGEF4-201ENST00000397081 EPB41L4AQ9HCS5 686 aaPredicted RBP16.56■□□□□ 0.24
RAPGEF4-201ENST00000397081 RNF40O75150 1001 aa16.55■□□□□ 0.24
RAPGEF4-201ENST00000397081 GTF2A1P52655 376 aaPredicted RBP16.55■□□□□ 0.24
RAPGEF4-201ENST00000397081 COPB1P53618 953 aaKnown RBP16.55■□□□□ 0.24
RAPGEF4-201ENST00000397081 DYNLL1P63167 89 aaKnown RBP16.55■□□□□ 0.24
RAPGEF4-201ENST00000397081 UBE3CQ15386 1083 aa16.55■□□□□ 0.24
RAPGEF4-201ENST00000397081 LPIN2Q92539 896 aa16.55■□□□□ 0.24
RAPGEF4-201ENST00000397081 NMT2O60551 498 aa16.55■□□□□ 0.24
RAPGEF4-201ENST00000397081 PCCAP05165 728 aaPredicted RBP16.55■□□□□ 0.24
RAPGEF4-201ENST00000397081 SND1Q7KZF4 910 aaKnown RBP eCLIP16.55■□□□□ 0.24
RAPGEF4-201ENST00000397081 TMTC2Q8N394 836 aa16.55■□□□□ 0.24
RAPGEF4-201ENST00000397081 CARD10Q9BWT7 1032 aa16.55■□□□□ 0.24
RAPGEF4-201ENST00000397081 MEGF6O75095 1541 aa16.55■□□□□ 0.24
RAPGEF4-201ENST00000397081 NCAPD2Q15021 1401 aa16.55■□□□□ 0.24
RAPGEF4-201ENST00000397081 ASIC1P78348 528 aa16.55■□□□□ 0.24
RAPGEF4-201ENST00000397081 NBPF3Q9H094 633 aa16.55■□□□□ 0.24
RAPGEF4-201ENST00000397081 NR1I3Q14994 352 aa16.54■□□□□ 0.24
RAPGEF4-201ENST00000397081 TTC31Q49AM3 519 aaPredicted RBP16.54■□□□□ 0.24
RAPGEF4-201ENST00000397081 IFT81Q8WYA0 676 aa16.54■□□□□ 0.24
RAPGEF4-201ENST00000397081 JAKMIP2Q96AA8 810 aa16.54■□□□□ 0.24
RAPGEF4-201ENST00000397081 CCDC42Q96M95 316 aa16.54■□□□□ 0.24
RAPGEF4-201ENST00000397081 ZBTB1Q9Y2K1 713 aa16.54■□□□□ 0.24
RAPGEF4-201ENST00000397081 SAR1BQ9Y6B6 198 aa16.54■□□□□ 0.24
RAPGEF4-201ENST00000397081 RFX7Q2KHR2 1363 aa16.54■□□□□ 0.24
RAPGEF4-201ENST00000397081 KRT86O43790 486 aa16.54■□□□□ 0.24
RAPGEF4-201ENST00000397081 EXOC4Q96A65 974 aa16.54■□□□□ 0.24
RAPGEF4-201ENST00000397081 FAM207AQ9NSI2 230 aaPredicted RBP16.54■□□□□ 0.24
RAPGEF4-201ENST00000397081 KDM6AO15550 1401 aaPredicted RBP16.54■□□□□ 0.24
RAPGEF4-201ENST00000397081 PP2D1A8MPX8 630 aa16.54■□□□□ 0.24
RAPGEF4-201ENST00000397081 KCNJ6P48051 423 aa16.54■□□□□ 0.24
RAPGEF4-201ENST00000397081 EARS2Q5JPH6 523 aaKnown RBP16.54■□□□□ 0.24
RAPGEF4-201ENST00000397081 IPO4Q8TEX9 1081 aaKnown RBP16.54■□□□□ 0.24
RAPGEF4-201ENST00000397081 FOXP1Q9H334 677 aaPredicted RBP16.54■□□□□ 0.24
RAPGEF4-201ENST00000397081 B4DLN1 442 aa16.53■□□□□ 0.24
RAPGEF4-201ENST00000397081 USP17L12C9JPN9 530 aa16.53■□□□□ 0.24
RAPGEF4-201ENST00000397081 USP17L21D6R901 530 aa16.53■□□□□ 0.24
RAPGEF4-201ENST00000397081 KIF5AQ12840 1032 aa16.53■□□□□ 0.24
RAPGEF4-201ENST00000397081 CDK5RAP3Q96JB5 506 aa16.53■□□□□ 0.24
RAPGEF4-201ENST00000397081 GYPCP04921 128 aa16.53■□□□□ 0.24
RAPGEF4-201ENST00000397081 ERCC5P28715 1186 aaPredicted RBP16.53■□□□□ 0.24
RAPGEF4-201ENST00000397081 USP5P45974 858 aa16.53■□□□□ 0.24
RAPGEF4-201ENST00000397081 LIG3P49916 1009 aa16.53■□□□□ 0.24
RAPGEF4-201ENST00000397081 SLC7A5Q01650 507 aa16.53■□□□□ 0.24
RAPGEF4-201ENST00000397081 ATP2B2Q01814 1243 aa16.53■□□□□ 0.24
RAPGEF4-201ENST00000397081 SPAG1Q07617 926 aa16.53■□□□□ 0.24
RAPGEF4-201ENST00000397081 C2orf54Q08AI8 447 aa16.53■□□□□ 0.24
RAPGEF4-201ENST00000397081 CACNA2D4Q7Z3S7 1137 aa16.53■□□□□ 0.24
RAPGEF4-201ENST00000397081 CSGALNACT2Q8N6G5 542 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms