RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 VPS54Q9P1Q0 977 aa19.31■□□□□ 0.68
MCF2L-208ENST00000397030 PAXBP1Q9Y5B6 917 aa19.31■□□□□ 0.68
MCF2L-208ENST00000397030 RALGAPBQ86X10 1494 aa19.31■□□□□ 0.68
MCF2L-208ENST00000397030 DLATP10515 647 aaKnown RBP19.31■□□□□ 0.68
MCF2L-208ENST00000397030 ERCC6LQ2NKX8 1250 aa19.31■□□□□ 0.68
MCF2L-208ENST00000397030 INTS8Q75QN2 995 aaKnown RBP19.31■□□□□ 0.68
MCF2L-208ENST00000397030 CERS3Q8IU89 383 aa19.31■□□□□ 0.68
MCF2L-208ENST00000397030 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.31■□□□□ 0.684e-7■■■■□ 22.3
MCF2L-208ENST00000397030 RTEL1Q9NZ71 1219 aa19.31■□□□□ 0.68
MCF2L-208ENST00000397030 SAMD15Q9P1V8 674 aa19.31■□□□□ 0.68
MCF2L-208ENST00000397030 GKAP1Q5VSY0 366 aaPredicted RBP19.31■□□□□ 0.68
MCF2L-208ENST00000397030 STAMQ92783 540 aa19.31■□□□□ 0.68
MCF2L-208ENST00000397030 BNIP3LO60238 219 aa19.31■□□□□ 0.68
MCF2L-208ENST00000397030 BCRP11274 1271 aa19.31■□□□□ 0.68
MCF2L-208ENST00000397030 CTSWP56202 376 aa19.31■□□□□ 0.68
MCF2L-208ENST00000397030 YWHAEP62258 255 aaKnown RBP19.31■□□□□ 0.68
MCF2L-208ENST00000397030 POMGNT1Q8WZA1 660 aa19.31■□□□□ 0.68
MCF2L-208ENST00000397030 SUCLG2Q96I99 432 aa19.31■□□□□ 0.68
MCF2L-208ENST00000397030 CCNA1P78396 465 aa19.3■□□□□ 0.68
MCF2L-208ENST00000397030 RAD17O75943 681 aa19.3■□□□□ 0.68
MCF2L-208ENST00000397030 PPP2R5AQ15172 486 aa19.3■□□□□ 0.68
MCF2L-208ENST00000397030 UVSSAQ2YD98 709 aa19.3■□□□□ 0.68
MCF2L-208ENST00000397030 SDCCAG8Q86SQ7 713 aaPredicted RBP19.3■□□□□ 0.68
MCF2L-208ENST00000397030 ARFGAP3Q9NP61 516 aa19.3■□□□□ 0.68
MCF2L-208ENST00000397030 LMCD1Q9NZU5 365 aa19.3■□□□□ 0.68
MCF2L-208ENST00000397030 LAMC3Q9Y6N6 1575 aa19.3■□□□□ 0.68
MCF2L-208ENST00000397030 TLR3O15455 904 aaKnown RBP19.3■□□□□ 0.68
MCF2L-208ENST00000397030 ATP2B4P23634 1241 aa19.3■□□□□ 0.68
MCF2L-208ENST00000397030 APPBP2Q92624 585 aa19.3■□□□□ 0.68
MCF2L-208ENST00000397030 PSMB7Q99436 277 aa19.3■□□□□ 0.68
MCF2L-208ENST00000397030 MAGED2Q9UNF1 606 aaPredicted RBP19.3■□□□□ 0.68
MCF2L-208ENST00000397030 TYW5A2RUC4 315 aaKnown RBP19.3■□□□□ 0.68
MCF2L-208ENST00000397030 AKR1B15C9JRZ8 316 aaPredicted RBP19.3■□□□□ 0.68
MCF2L-208ENST00000397030 TBC1D8O95759 1140 aa19.3■□□□□ 0.68
MCF2L-208ENST00000397030 CAVIN2O95810 425 aa19.3■□□□□ 0.68
MCF2L-208ENST00000397030 FAM160B1Q5W0V3 765 aa19.3■□□□□ 0.68
MCF2L-208ENST00000397030 RPS6KB1P23443 525 aa19.3■□□□□ 0.68
MCF2L-208ENST00000397030 ICA1Q05084 483 aa19.3■□□□□ 0.68
MCF2L-208ENST00000397030 FYB2Q5VWT5 728 aa19.3■□□□□ 0.68
MCF2L-208ENST00000397030 DCLK2Q8N568 766 aa19.3■□□□□ 0.68
MCF2L-208ENST00000397030 MRPL11Q9Y3B7 192 aaKnown RBP19.3■□□□□ 0.68
MCF2L-208ENST00000397030 SYNRGQ9UMZ2 1314 aa19.3■□□□□ 0.68
MCF2L-208ENST00000397030 TMEM232C9JQI7 657 aa19.29■□□□□ 0.68
MCF2L-208ENST00000397030 SLC27A2O14975 620 aa19.29■□□□□ 0.68
MCF2L-208ENST00000397030 ZSCAN20P17040 1043 aaPredicted RBP19.29■□□□□ 0.68
MCF2L-208ENST00000397030 RSAD2Q8WXG1 361 aa19.29■□□□□ 0.68
MCF2L-208ENST00000397030 SPATA17Q96L03 361 aa19.29■□□□□ 0.68
MCF2L-208ENST00000397030 FAM227BQ96M60 508 aa19.29■□□□□ 0.68
MCF2L-208ENST00000397030 MYL3P08590 195 aa19.29■□□□□ 0.68
MCF2L-208ENST00000397030 SDR42E1Q8WUS8 393 aa19.29■□□□□ 0.68
MCF2L-208ENST00000397030 PSTPIP2Q9H939 334 aa19.29■□□□□ 0.68
MCF2L-208ENST00000397030 PPARAQ07869 468 aa19.29■□□□□ 0.68
MCF2L-208ENST00000397030 GPBP1Q86WP2 473 aa19.29■□□□□ 0.68
MCF2L-208ENST00000397030 VPS18Q9P253 973 aa19.29■□□□□ 0.68
MCF2L-208ENST00000397030 BCAMP50895 628 aa19.29■□□□□ 0.68
MCF2L-208ENST00000397030 VAV2P52735 878 aa19.29■□□□□ 0.68
MCF2L-208ENST00000397030 MUM1L1Q5H9M0 696 aa19.29■□□□□ 0.68
MCF2L-208ENST00000397030 SCYL1Q96KG9 808 aa19.29■□□□□ 0.68
MCF2L-208ENST00000397030 PPP1R12AO14974 1030 aaPredicted RBP19.28■□□□□ 0.68
MCF2L-208ENST00000397030 NUCKS1Q9H1E3 243 aaKnown RBP19.28■□□□□ 0.68
MCF2L-208ENST00000397030 KIF11P52732 1056 aa19.28■□□□□ 0.68
MCF2L-208ENST00000397030 PAK1Q13153 545 aa19.28■□□□□ 0.68
MCF2L-208ENST00000397030 TRIM56Q9BRZ2 755 aaKnown RBP19.28■□□□□ 0.68
MCF2L-208ENST00000397030 ANGEL1Q9UNK9 670 aaKnown RBP19.28■□□□□ 0.68
MCF2L-208ENST00000397030 SOS1Q07889 1333 aaPredicted RBP19.28■□□□□ 0.68
MCF2L-208ENST00000397030 SARNPP82979 210 aaKnown RBP19.28■□□□□ 0.68
MCF2L-208ENST00000397030 REXO1Q8N1G1 1221 aaKnown RBP19.28■□□□□ 0.68
MCF2L-208ENST00000397030 ZNF518AQ6AHZ1 1483 aa19.28■□□□□ 0.68
MCF2L-208ENST00000397030 ZNF131P52739 623 aa19.28■□□□□ 0.68
MCF2L-208ENST00000397030 ABCB5Q2M3G0 1257 aa19.28■□□□□ 0.68
MCF2L-208ENST00000397030 SYT10Q6XYQ8 523 aa19.28■□□□□ 0.68
MCF2L-208ENST00000397030 MCF2L2Q86YR7 1114 aa19.28■□□□□ 0.68
MCF2L-208ENST00000397030 KSR1Q8IVT5 923 aa19.28■□□□□ 0.68
MCF2L-208ENST00000397030 IGSF22Q8N9C0 903 aa19.28■□□□□ 0.68
MCF2L-208ENST00000397030 SYCP2Q9BX26 1530 aa19.28■□□□□ 0.68
MCF2L-208ENST00000397030 DIS3L2Q8IYB7 885 aaKnown RBP19.28■□□□□ 0.68
MCF2L-208ENST00000397030 SLITRK6Q9H5Y7 841 aa19.28■□□□□ 0.68
MCF2L-208ENST00000397030 VPS37BQ9H9H4 285 aa19.28■□□□□ 0.68
MCF2L-208ENST00000397030 MOSPD1Q9UJG1 213 aa19.28■□□□□ 0.68
MCF2L-208ENST00000397030 ARHGEF10O15013 1369 aa19.27■□□□□ 0.68
MCF2L-208ENST00000397030 ASXL1Q8IXJ9 1541 aa19.27■□□□□ 0.68
MCF2L-208ENST00000397030 TECP42680 631 aa19.27■□□□□ 0.68
MCF2L-208ENST00000397030 PTPROQ16827 1216 aa19.27■□□□□ 0.68
MCF2L-208ENST00000397030 TMTC4Q5T4D3 741 aa19.27■□□□□ 0.68
MCF2L-208ENST00000397030 KLHL7Q8IXQ5 586 aa19.27■□□□□ 0.68
MCF2L-208ENST00000397030 NLRP7Q8WX94 980 aa19.27■□□□□ 0.68
MCF2L-208ENST00000397030 DISC1Q9NRI5 854 aa19.27■□□□□ 0.68
MCF2L-208ENST00000397030 NXNQ6DKJ4 435 aa19.27■□□□□ 0.68
MCF2L-208ENST00000397030 KRT27Q7Z3Y8 459 aa19.27■□□□□ 0.68
MCF2L-208ENST00000397030 STMN2Q93045 179 aa19.27■□□□□ 0.68
MCF2L-208ENST00000397030 PIK3CAP42336 1068 aa19.27■□□□□ 0.68
MCF2L-208ENST00000397030 HDAC1Q13547 482 aaPredicted RBP19.27■□□□□ 0.68
MCF2L-208ENST00000397030 FBXO11Q86XK2 927 aa19.27■□□□□ 0.68
MCF2L-208ENST00000397030 TMEM191BP0C7N4 346 aa19.27■□□□□ 0.67
MCF2L-208ENST00000397030 MNAT1P51948 309 aa19.27■□□□□ 0.67
MCF2L-208ENST00000397030 DALRD3Q5D0E6 543 aaKnown RBP19.27■□□□□ 0.67
MCF2L-208ENST00000397030 PCDHB15Q9Y5E8 787 aa19.27■□□□□ 0.67
MCF2L-208ENST00000397030 METTL23Q86XA0 190 aa19.27■□□□□ 0.67
MCF2L-208ENST00000397030 KCNH3Q9ULD8 1083 aa19.27■□□□□ 0.67
MCF2L-208ENST00000397030 MIGA2Q7L4E1 593 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms