RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 PUM3Q15397 648 aaKnown RBP15.83■□□□□ 0.12
NUP98-204ENST00000397004 AMPD2Q01433 879 aa15.83■□□□□ 0.12
NUP98-204ENST00000397004 KRT31Q15323 416 aa15.83■□□□□ 0.12
NUP98-204ENST00000397004 IQSEC3Q9UPP2 1182 aaPredicted RBP15.83■□□□□ 0.12
NUP98-204ENST00000397004 RHOXF2BP0C7M4 288 aa15.82■□□□□ 0.12
NUP98-204ENST00000397004 CYP19A1P11511 503 aaPredicted RBP15.82■□□□□ 0.12
NUP98-204ENST00000397004 ZNF174Q15697 407 aa15.82■□□□□ 0.12
NUP98-204ENST00000397004 MUM1L1Q5H9M0 696 aa15.82■□□□□ 0.12
NUP98-204ENST00000397004 ZNF384Q8TF68 577 aa15.82■□□□□ 0.12
NUP98-204ENST00000397004 RHOXF2Q9BQY4 288 aa15.82■□□□□ 0.12
NUP98-204ENST00000397004 DISP2A7MBM2 1401 aa15.82■□□□□ 0.12
NUP98-204ENST00000397004 NCAPH2Q6IBW4 605 aa15.82■□□□□ 0.12
NUP98-204ENST00000397004 IRF2BP1Q8IU81 584 aa15.82■□□□□ 0.12
NUP98-204ENST00000397004 ENAHQ8N8S7 591 aaPredicted RBP15.82■□□□□ 0.12
NUP98-204ENST00000397004 TMOD3Q9NYL9 352 aa15.82■□□□□ 0.12
NUP98-204ENST00000397004 HNRNPLLQ8WVV9 542 aaKnown RBP15.82■□□□□ 0.12
NUP98-204ENST00000397004 ZFP91Q96JP5 570 aaPredicted RBP15.82■□□□□ 0.12
NUP98-204ENST00000397004 WNK3Q9BYP7 1800 aa15.82■□□□□ 0.12
NUP98-204ENST00000397004 TNKSO95271 1327 aa15.81■□□□□ 0.12
NUP98-204ENST00000397004 LRRIQ3A6PVS8 624 aaPredicted RBP15.81■□□□□ 0.12
NUP98-204ENST00000397004 NKRFO15226 690 aaKnown RBP eCLIP15.81■□□□□ 0.12
NUP98-204ENST00000397004 ZSCAN26Q16670 478 aa15.81■□□□□ 0.12
NUP98-204ENST00000397004 CTNND2Q9UQB3 1225 aa15.81■□□□□ 0.12
NUP98-204ENST00000397004 ANKRD36CQ5JPF3 1778 aa15.81■□□□□ 0.12
NUP98-204ENST00000397004 COL14A1Q05707 1796 aaKnown RBP15.81■□□□□ 0.12
NUP98-204ENST00000397004 SAFBQ15424 915 aaKnown RBP eCLIP15.81■□□□□ 0.12
NUP98-204ENST00000397004 KRT23Q9C075 422 aa15.81■□□□□ 0.12
NUP98-204ENST00000397004 TDO2P48775 406 aa15.81■□□□□ 0.12
NUP98-204ENST00000397004 TRIM22Q8IYM9 498 aa15.81■□□□□ 0.12
NUP98-204ENST00000397004 VPS16Q9H269 839 aa15.81■□□□□ 0.12
NUP98-204ENST00000397004 ABHD10Q9NUJ1 306 aa15.81■□□□□ 0.12
NUP98-204ENST00000397004 MAPK8IP1Q9UQF2 711 aa15.81■□□□□ 0.12
NUP98-204ENST00000397004 V9GY48 417 aaPredicted RBP15.81■□□□□ 0.12
NUP98-204ENST00000397004 PLCH1Q4KWH8 1693 aa15.81■□□□□ 0.12
NUP98-204ENST00000397004 LRRC10BA6NIK2 292 aa15.8■□□□□ 0.12
NUP98-204ENST00000397004 PMS1P54277 932 aaKnown RBP15.8■□□□□ 0.12
NUP98-204ENST00000397004 PPARAQ07869 468 aa15.8■□□□□ 0.12
NUP98-204ENST00000397004 PDXDC2PQ6P474 469 aa15.8■□□□□ 0.12
NUP98-204ENST00000397004 CARD10Q9BWT7 1032 aa15.8■□□□□ 0.12
NUP98-204ENST00000397004 CNNM2Q9H8M5 875 aa15.8■□□□□ 0.12
NUP98-204ENST00000397004 HDAC6Q9UBN7 1215 aa15.8■□□□□ 0.12
NUP98-204ENST00000397004 BAZ2AQ9UIF9 1905 aaKnown RBP15.8■□□□□ 0.12
NUP98-204ENST00000397004 COL1A1P02452 1464 aaPredicted RBP15.8■□□□□ 0.12
NUP98-204ENST00000397004 PDE8AO60658 829 aa15.8■□□□□ 0.12
NUP98-204ENST00000397004 BRD3Q15059 726 aa15.8■□□□□ 0.12
NUP98-204ENST00000397004 LRRC15Q8TF66 581 aa15.8■□□□□ 0.12
NUP98-204ENST00000397004 WASF1Q92558 559 aa15.8■□□□□ 0.12
NUP98-204ENST00000397004 ITGB4P16144 1822 aa15.8■□□□□ 0.12
NUP98-204ENST00000397004 PNPLA7Q6ZV29 1317 aa15.8■□□□□ 0.12
NUP98-204ENST00000397004 CICQ96RK0 1608 aaPredicted RBP15.8■□□□□ 0.12
NUP98-204ENST00000397004 UQCRFS1P1P0C7P4 283 aa15.8■□□□□ 0.12
NUP98-204ENST00000397004 HOOK1Q9UJC3 728 aaKnown RBP15.8■□□□□ 0.12
NUP98-204ENST00000397004 TRIM75PA6NK02 468 aa15.79■□□□□ 0.12
NUP98-204ENST00000397004 NMT2O60551 498 aa15.79■□□□□ 0.12
NUP98-204ENST00000397004 LMAN1P49257 510 aa15.79■□□□□ 0.12
NUP98-204ENST00000397004 DACH1Q9UI36 760 aa15.79■□□□□ 0.12
NUP98-204ENST00000397004 FAN1Q9Y2M0 1017 aa15.79■□□□□ 0.12
NUP98-204ENST00000397004 PTGDRQ13258 359 aa15.79■□□□□ 0.12
NUP98-204ENST00000397004 SUSD4Q5VX71 490 aa15.79■□□□□ 0.12
NUP98-204ENST00000397004 SLF1Q9BQI6 1058 aa15.79■□□□□ 0.12
NUP98-204ENST00000397004 TAB2Q9NYJ8 693 aa15.79■□□□□ 0.12
NUP98-204ENST00000397004 TROAPQ12815 778 aa15.79■□□□□ 0.12
NUP98-204ENST00000397004 MAP3K12Q12852 859 aa15.79■□□□□ 0.12
NUP98-204ENST00000397004 VPS18Q9P253 973 aa15.79■□□□□ 0.12
NUP98-204ENST00000397004 GDAQ9Y2T3 454 aa15.79■□□□□ 0.12
NUP98-204ENST00000397004 MINDY4BA8MYZ0 360 aa15.78■□□□□ 0.12
NUP98-204ENST00000397004 ZNF34Q8IZ26 560 aa15.78■□□□□ 0.12
NUP98-204ENST00000397004 TXLNBQ8N3L3 684 aa15.78■□□□□ 0.12
NUP98-204ENST00000397004 EXOC4Q96A65 974 aa15.78■□□□□ 0.12
NUP98-204ENST00000397004 RNF26Q9BY78 433 aaPredicted RBP15.78■□□□□ 0.12
NUP98-204ENST00000397004 ZC3H4Q9UPT8 1303 aaKnown RBP15.78■□□□□ 0.12
NUP98-204ENST00000397004 ENC1O14682 589 aa15.78■□□□□ 0.12
NUP98-204ENST00000397004 KIF4BQ2VIQ3 1234 aa15.78■□□□□ 0.12
NUP98-204ENST00000397004 PPFIBP1Q86W92 1011 aa15.78■□□□□ 0.12
NUP98-204ENST00000397004 GSDMAQ96QA5 445 aa15.78■□□□□ 0.12
NUP98-204ENST00000397004 TRIM49BA6NDI0 452 aa15.78■□□□□ 0.12
NUP98-204ENST00000397004 KANK3Q6NY19 840 aa15.78■□□□□ 0.12
NUP98-204ENST00000397004 LIMA1Q9UHB6 759 aaKnown RBP15.78■□□□□ 0.12
NUP98-204ENST00000397004 KIF5CO60282 957 aa15.77■□□□□ 0.12
NUP98-204ENST00000397004 SRGAP2O75044 1071 aa15.77■□□□□ 0.12
NUP98-204ENST00000397004 WDR59Q6PJI9 974 aa15.77■□□□□ 0.12
NUP98-204ENST00000397004 NAA15Q9BXJ9 866 aaKnown RBP15.77■□□□□ 0.12
NUP98-204ENST00000397004 MYH13Q9UKX3 1938 aa15.77■□□□□ 0.12
NUP98-204ENST00000397004 RASSF10A6NK89 507 aa15.77■□□□□ 0.12
NUP98-204ENST00000397004 DYNLL1P63167 89 aaKnown RBP15.77■□□□□ 0.12
NUP98-204ENST00000397004 SRBD1Q8N5C6 995 aaKnown RBP15.77■□□□□ 0.12
NUP98-204ENST00000397004 RIOK1Q9BRS2 568 aaKnown RBP15.77■□□□□ 0.12
NUP98-204ENST00000397004 ITIH6Q6UXX5 1313 aa15.77■□□□□ 0.12
NUP98-204ENST00000397004 MROH5Q6ZUA9 1318 aa15.77■□□□□ 0.12
NUP98-204ENST00000397004 RCCD1A6NED2 376 aa15.77■□□□□ 0.11
NUP98-204ENST00000397004 PHACTR2O75167 634 aa15.77■□□□□ 0.11
NUP98-204ENST00000397004 CASP8Q14790 479 aa15.77■□□□□ 0.11
NUP98-204ENST00000397004 PSD3Q9NYI0 1048 aa15.77■□□□□ 0.11
NUP98-204ENST00000397004 CACNA1SQ13698 1873 aa15.77■□□□□ 0.11
NUP98-204ENST00000397004 CTAGE9A4FU28 777 aa15.76■□□□□ 0.11
NUP98-204ENST00000397004 ATP2C1P98194 919 aaPredicted RBP15.76■□□□□ 0.11
NUP98-204ENST00000397004 EEF2KMTQ96G04 330 aa15.76■□□□□ 0.11
NUP98-204ENST00000397004 PHLPP1O60346 1717 aa15.76■□□□□ 0.11
NUP98-204ENST00000397004 NRAPQ86VF7 1730 aa15.76■□□□□ 0.11
NUP98-204ENST00000397004 DUOX1Q9NRD9 1551 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms