RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 LRRC47Q8N1G4 583 aaKnown RBP34.66■■■■□ 3.14
CHCHD4-202ENST00000396914 ZKSCAN3Q9BRR0 538 aa34.66■■■■□ 3.14
CHCHD4-202ENST00000396914 ASCC2Q9H1I8 757 aaPredicted RBP34.66■■■■□ 3.14
CHCHD4-202ENST00000396914 RPAP3Q9H6T3 665 aaPredicted RBP34.66■■■■□ 3.14
CHCHD4-202ENST00000396914 GPR25O00155 361 aa34.65■■■■□ 3.14
CHCHD4-202ENST00000396914 SLC27A2O14975 620 aa34.65■■■■□ 3.14
CHCHD4-202ENST00000396914 TLR2O60603 784 aa34.65■■■■□ 3.14
CHCHD4-202ENST00000396914 RNF20Q5VTR2 975 aa34.65■■■■□ 3.14
CHCHD4-202ENST00000396914 CREB3L3Q68CJ9 461 aa34.65■■■■□ 3.14
CHCHD4-202ENST00000396914 RALYLQ86SE5 291 aaKnown RBP34.65■■■■□ 3.14
CHCHD4-202ENST00000396914 LPAR1Q92633 364 aa34.65■■■■□ 3.14
CHCHD4-202ENST00000396914 TANGO6Q9C0B7 1094 aa34.65■■■■□ 3.14
CHCHD4-202ENST00000396914 MYH4Q9Y623 1939 aa34.64■■■■□ 3.14
CHCHD4-202ENST00000396914 USP17L15C9J2P7 530 aa34.64■■■■□ 3.14
CHCHD4-202ENST00000396914 USP17L13C9JLJ4 530 aa34.64■■■■□ 3.14
CHCHD4-202ENST00000396914 USP17L11C9JVI0 530 aa34.64■■■■□ 3.14
CHCHD4-202ENST00000396914 USP17L18D6R9N7 530 aa34.64■■■■□ 3.14
CHCHD4-202ENST00000396914 USP17L22D6RA61 530 aa34.64■■■■□ 3.14
CHCHD4-202ENST00000396914 USP17L17D6RBQ6 530 aa34.64■■■■□ 3.14
CHCHD4-202ENST00000396914 USP17L19D6RCP7 530 aa34.64■■■■□ 3.14
CHCHD4-202ENST00000396914 USP17L20D6RJB6 530 aa34.64■■■■□ 3.14
CHCHD4-202ENST00000396914 E7EWF7 191 aa34.64■■■■□ 3.14
CHCHD4-202ENST00000396914 USP17L24Q0WX57 530 aa34.64■■■■□ 3.14
CHCHD4-202ENST00000396914 KIAA1755Q5JYT7 1200 aa34.64■■■■□ 3.14
CHCHD4-202ENST00000396914 IQCA1Q86XH1 822 aa34.64■■■■□ 3.14
CHCHD4-202ENST00000396914 NKX2-3Q8TAU0 364 aa34.64■■■■□ 3.14
CHCHD4-202ENST00000396914 CPA4Q9UI42 421 aa34.64■■■■□ 3.14
CHCHD4-202ENST00000396914 TAF6LQ9Y6J9 622 aa34.64■■■■□ 3.14
CHCHD4-202ENST00000396914 HOXA7P31268 230 aaPredicted RBP34.64■■■■□ 3.14
CHCHD4-202ENST00000396914 NT5C2P49902 561 aa34.64■■■■□ 3.14
CHCHD4-202ENST00000396914 NECTIN1Q15223 517 aa34.64■■■■□ 3.14
CHCHD4-202ENST00000396914 ZSWIM5Q9P217 1185 aa34.64■■■■□ 3.14
CHCHD4-202ENST00000396914 NCOA7Q8NI08 942 aa34.63■■■■□ 3.13
CHCHD4-202ENST00000396914 TCP11L1Q9NUJ3 509 aa34.63■■■■□ 3.13
CHCHD4-202ENST00000396914 F5H6K3 240 aa34.62■■■■□ 3.13
CHCHD4-202ENST00000396914 KLRC3Q07444 240 aa34.62■■■■□ 3.13
CHCHD4-202ENST00000396914 ZNF296Q8WUU4 475 aaPredicted RBP34.62■■■■□ 3.13
CHCHD4-202ENST00000396914 MKL1Q969V6 931 aa34.62■■■■□ 3.13
CHCHD4-202ENST00000396914 CHMP4CQ96CF2 233 aa34.62■■■■□ 3.13
CHCHD4-202ENST00000396914 ISY1Q9ULR0 285 aaKnown RBP34.62■■■■□ 3.13
CHCHD4-202ENST00000396914 MTMR7Q9Y216 660 aa34.62■■■■□ 3.13
CHCHD4-202ENST00000396914 SAMD1Q6SPF0 538 aaPredicted RBP34.61■■■■□ 3.13
CHCHD4-202ENST00000396914 UBAC1Q9BSL1 405 aa34.61■■■■□ 3.13
CHCHD4-202ENST00000396914 WDR46O15213 610 aaKnown RBP34.6■■■■□ 3.13
CHCHD4-202ENST00000396914 FKTNO75072 461 aa34.6■■■■□ 3.13
CHCHD4-202ENST00000396914 CATSPERGQ6ZRH7 1159 aa34.6■■■■□ 3.13
CHCHD4-202ENST00000396914 P2RX7Q99572 595 aaKnown RBP34.6■■■■□ 3.13
CHCHD4-202ENST00000396914 CCDC178Q5BJE1 867 aa34.59■■■■□ 3.13
CHCHD4-202ENST00000396914 STOX1Q6ZVD7 989 aa34.59■■■■□ 3.13
CHCHD4-202ENST00000396914 NDUFB10O96000 172 aa34.58■■■■□ 3.13
CHCHD4-202ENST00000396914 SP3Q02447 781 aa34.58■■■■□ 3.13
CHCHD4-202ENST00000396914 ZSCAN10Q96SZ4 725 aaPredicted RBP34.58■■■■□ 3.13
CHCHD4-202ENST00000396914 NUP88Q99567 741 aaPredicted RBP34.58■■■■□ 3.13
CHCHD4-202ENST00000396914 PRDM10Q9NQV6 1147 aa34.58■■■■□ 3.13
CHCHD4-202ENST00000396914 SYNPO2Q9UMS6 1093 aa34.58■■■■□ 3.13
CHCHD4-202ENST00000396914 ECM2O94769 699 aaPredicted RBP34.57■■■■□ 3.13
CHCHD4-202ENST00000396914 TOP1P11387 765 aaKnown RBP34.57■■■■□ 3.13
CHCHD4-202ENST00000396914 ZKSCAN1P17029 563 aaPredicted RBP34.57■■■■□ 3.13
CHCHD4-202ENST00000396914 FAM83BQ5T0W9 1011 aa34.57■■■■□ 3.13
CHCHD4-202ENST00000396914 SLFN13Q68D06 897 aa34.57■■■■□ 3.13
CHCHD4-202ENST00000396914 C17orf99Q6UX52 265 aa34.57■■■■□ 3.13
CHCHD4-202ENST00000396914 CYB5R4Q7L1T6 521 aa34.57■■■■□ 3.13
CHCHD4-202ENST00000396914 HERVK_113P62684 666 aa34.56■■■■□ 3.12
CHCHD4-202ENST00000396914 NOM1Q5C9Z4 860 aaKnown RBP34.56■■■■□ 3.12
CHCHD4-202ENST00000396914 ANKRD13CQ8N6S4 541 aa34.56■■■■□ 3.12
CHCHD4-202ENST00000396914 GMCL1P1Q8NEA9 526 aa34.56■■■■□ 3.12
CHCHD4-202ENST00000396914 TTC14Q96N46 770 aa34.56■■■■□ 3.12
CHCHD4-202ENST00000396914 ADGRA2Q96PE1 1338 aa34.56■■■■□ 3.12
CHCHD4-202ENST00000396914 FLOT1O75955 427 aa34.55■■■■□ 3.12
CHCHD4-202ENST00000396914 GCLCP48506 637 aaPredicted RBP34.55■■■■□ 3.12
CHCHD4-202ENST00000396914 TMEM47Q9BQJ4 181 aa34.55■■■■□ 3.12
CHCHD4-202ENST00000396914 CASP8AP2Q9UKL3 1982 aa34.55■■■■□ 3.12
CHCHD4-202ENST00000396914 TNKSO95271 1327 aa34.55■■■■□ 3.12
CHCHD4-202ENST00000396914 CHST3Q7LGC8 479 aa34.55■■■■□ 3.12
CHCHD4-202ENST00000396914 COG2Q14746 738 aa34.54■■■■□ 3.12
CHCHD4-202ENST00000396914 KIF22Q14807 665 aa34.54■■■■□ 3.12
CHCHD4-202ENST00000396914 DGKHQ86XP1 1220 aa34.54■■■■□ 3.12
CHCHD4-202ENST00000396914 PAGR1Q9BTK6 254 aa34.54■■■■□ 3.12
CHCHD4-202ENST00000396914 ERICH2A1L162 156 aa34.53■■■■□ 3.12
CHCHD4-202ENST00000396914 MCCP23508 829 aa34.53■■■■□ 3.12
CHCHD4-202ENST00000396914 NOVP48745 357 aa34.53■■■■□ 3.12
CHCHD4-202ENST00000396914 RCSD1Q6JBY9 416 aa34.53■■■■□ 3.12
CHCHD4-202ENST00000396914 ERO1AQ96HE7 468 aa34.53■■■■□ 3.12
CHCHD4-202ENST00000396914 KAT14Q9H8E8 782 aa34.53■■■■□ 3.12
CHCHD4-202ENST00000396914 HOXC10Q9NYD6 342 aa34.53■■■■□ 3.12
CHCHD4-202ENST00000396914 SLC1A4P43007 532 aa34.52■■■■□ 3.12
CHCHD4-202ENST00000396914 SART3Q15020 963 aaKnown RBP34.52■■■■□ 3.12
CHCHD4-202ENST00000396914 ENAHQ8N8S7 591 aaPredicted RBP34.52■■■■□ 3.12
CHCHD4-202ENST00000396914 CD99L2Q8TCZ2 262 aa34.52■■■■□ 3.12
CHCHD4-202ENST00000396914 IFIT3O14879 490 aaKnown RBP34.51■■■■□ 3.12
CHCHD4-202ENST00000396914 BCRP11274 1271 aa34.51■■■■□ 3.12
CHCHD4-202ENST00000396914 BMP3P12645 472 aa34.51■■■■□ 3.12
CHCHD4-202ENST00000396914 IFIT1BQ5T764 474 aaKnown RBP34.51■■■■□ 3.12
CHCHD4-202ENST00000396914 RASEFQ8IZ41 740 aa34.51■■■■□ 3.12
CHCHD4-202ENST00000396914 GTF3C2Q8WUA4 911 aaPredicted RBP34.51■■■■□ 3.12
CHCHD4-202ENST00000396914 HSPA4P34932 840 aa34.5■■■■□ 3.11
CHCHD4-202ENST00000396914 IKQ13123 557 aaPredicted RBP34.5■■■■□ 3.11
CHCHD4-202ENST00000396914 KRT32Q14532 448 aa34.5■■■■□ 3.11
CHCHD4-202ENST00000396914 CCDC96Q2M329 555 aa34.5■■■■□ 3.11
CHCHD4-202ENST00000396914 MB21D2Q8IYB1 491 aaPredicted RBP34.5■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms