RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 SNW1Q13573 536 aaKnown RBP6.15□□□□□ -1.42
VPS41-203ENST00000395969 SLC39A14Q15043 492 aa6.15□□□□□ -1.42
VPS41-203ENST00000395969 COBLL1Q53SF7 1204 aa6.15□□□□□ -1.42
VPS41-203ENST00000395969 MCTP2Q6DN12 878 aa6.15□□□□□ -1.42
VPS41-203ENST00000395969 TTLL5Q6EMB2 1281 aa6.15□□□□□ -1.42
VPS41-203ENST00000395969 RPGRQ92834 1020 aaKnown RBP6.15□□□□□ -1.42
VPS41-203ENST00000395969 SGIP1Q9BQI5 828 aa6.15□□□□□ -1.42
VPS41-203ENST00000395969 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.15□□□□□ -1.42
VPS41-203ENST00000395969 PGAP2Q9UHJ9 254 aa6.15□□□□□ -1.42
VPS41-203ENST00000395969 ZNF215Q9UL58 517 aaPredicted RBP6.15□□□□□ -1.42
VPS41-203ENST00000395969 SLC4A4Q9Y6R1 1079 aa6.15□□□□□ -1.42
VPS41-203ENST00000395969 V9GYY5 206 aaPredicted RBP6.15□□□□□ -1.42
VPS41-203ENST00000395969 RLFQ13129 1914 aa6.15□□□□□ -1.43
VPS41-203ENST00000395969 PALM3A6NDB9 673 aaPredicted RBP6.15□□□□□ -1.43
VPS41-203ENST00000395969 RANBP6O60518 1105 aaKnown RBP6.15□□□□□ -1.43
VPS41-203ENST00000395969 CMA1P23946 247 aa6.15□□□□□ -1.43
VPS41-203ENST00000395969 GYG1P46976 350 aa6.15□□□□□ -1.43
VPS41-203ENST00000395969 PKN1Q16512 942 aa6.15□□□□□ -1.43
VPS41-203ENST00000395969 AXDND1Q5T1B0 1012 aaPredicted RBP6.15□□□□□ -1.43
VPS41-203ENST00000395969 TATDN1Q6P1N9 297 aa6.15□□□□□ -1.43
VPS41-203ENST00000395969 TMTC3Q6ZXV5 915 aa6.15□□□□□ -1.43
VPS41-203ENST00000395969 RALYLQ86SE5 291 aaKnown RBP6.15□□□□□ -1.43
VPS41-203ENST00000395969 KRI1Q8N9T8 703 aaKnown RBP6.15□□□□□ -1.43
VPS41-203ENST00000395969 LINC00301Q8NCQ3 95 aa6.15□□□□□ -1.43
VPS41-203ENST00000395969 GEMIN8Q9NWZ8 242 aaKnown RBP6.15□□□□□ -1.43
VPS41-203ENST00000395969 FHOD1Q9Y613 1164 aa6.15□□□□□ -1.43
VPS41-203ENST00000395969 MRVI1Q9Y6F6 885 aa6.15□□□□□ -1.43
VPS41-203ENST00000395969 CNTNAP5Q8WYK1 1306 aa6.15□□□□□ -1.43
VPS41-203ENST00000395969 A0A0G2JLW4 131 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 ZBTB43O43298 467 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 ENTPD3O75355 529 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 LDHBP07195 334 aaKnown RBP6.14□□□□□ -1.43
VPS41-203ENST00000395969 NOP2P46087 812 aaKnown RBP6.14□□□□□ -1.43
VPS41-203ENST00000395969 ZNF75DP51815 510 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 MCCD1P59942 119 aaPredicted RBP6.14□□□□□ -1.43
VPS41-203ENST00000395969 PDE4DQ08499 809 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 DHX8Q14562 1220 aaKnown RBP6.14□□□□□ -1.43
VPS41-203ENST00000395969 BMS1Q14692 1282 aaKnown RBP6.14□□□□□ -1.43
VPS41-203ENST00000395969 TTC6Q86TZ1 520 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 SAMD3Q8N6K7 520 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 ENAHQ8N8S7 591 aaPredicted RBP6.14□□□□□ -1.43
VPS41-203ENST00000395969 FANCBQ8NB91 859 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 PYM1Q9BRP8 204 aaKnown RBP6.14□□□□□ -1.43
VPS41-203ENST00000395969 NRBP1Q9UHY1 535 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 LRRC37A2A6NM11 1700 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 LAD1O00515 517 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 KLRK1P26718 216 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 PRPHP41219 470 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 FOSBP53539 338 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 APOBRQ0VD83 1088 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 CPLX2Q6PUV4 134 aaKnown RBP6.14□□□□□ -1.43
VPS41-203ENST00000395969 FMR1NBQ8N0W7 255 aaPredicted RBP6.14□□□□□ -1.43
VPS41-203ENST00000395969 NKX2-3Q8TAU0 364 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 DHX36Q9H2U1 1008 aaKnown RBP6.14□□□□□ -1.43
VPS41-203ENST00000395969 ARMT1Q9H993 441 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 TUBE1Q9UJT0 475 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 CPA1P15085 419 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 KCNA3P22001 575 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 PDE4BQ07343 736 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 ELF2Q15723 593 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 TPD52L1Q16890 204 aaPredicted RBP6.14□□□□□ -1.43
VPS41-203ENST00000395969 DACT2Q5SW24 774 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 ARL6IP4Q66PJ3 421 aaKnown RBP6.14□□□□□ -1.43
VPS41-203ENST00000395969 ZNF662Q6ZS27 426 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 NOL8Q76FK4 1167 aaKnown RBP6.14□□□□□ -1.43
VPS41-203ENST00000395969 TXNRD3Q86VQ6 643 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 CACTINQ8WUQ7 758 aaKnown RBP6.14□□□□□ -1.43
VPS41-203ENST00000395969 PGBD1Q96JS3 809 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 UBXN6Q9BZV1 441 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 RIOX1Q9H6W3 641 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 LRP2BPQ9P2M1 347 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 NDUFB9Q9Y6M9 179 aa6.14□□□□□ -1.43
VPS41-203ENST00000395969 FLT1P17948 1338 aa6.13□□□□□ -1.43
VPS41-203ENST00000395969 KLF18A0A0U1RQI7 1052 aa6.13□□□□□ -1.43
VPS41-203ENST00000395969 IDH1O75874 414 aaKnown RBP6.13□□□□□ -1.43
VPS41-203ENST00000395969 TRIM37O94972 964 aa6.13□□□□□ -1.43
VPS41-203ENST00000395969 MYL1P05976 194 aa6.13□□□□□ -1.43
VPS41-203ENST00000395969 CDC27P30260 824 aa6.13□□□□□ -1.43
VPS41-203ENST00000395969 METAP2P50579 478 aaKnown RBP eCLIP6.13□□□□□ -1.43
VPS41-203ENST00000395969 PFKFB3Q16875 520 aaPredicted RBP6.13□□□□□ -1.43
VPS41-203ENST00000395969 RILPL1Q5EBL4 403 aa6.13□□□□□ -1.43
VPS41-203ENST00000395969 MYSM1Q5VVJ2 828 aa6.13□□□□□ -1.43
VPS41-203ENST00000395969 RESP18Q5W5W9 173 aa6.13□□□□□ -1.43
VPS41-203ENST00000395969 RTKN2Q8IZC4 609 aa6.13□□□□□ -1.43
VPS41-203ENST00000395969 ZNF654Q8IZM8 581 aa6.13□□□□□ -1.43
VPS41-203ENST00000395969 CCDC17Q96LX7 622 aa6.13□□□□□ -1.43
VPS41-203ENST00000395969 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.13□□□□□ -1.43
VPS41-203ENST00000395969 NEMFO60524 1076 aa6.13□□□□□ -1.43
VPS41-203ENST00000395969 CUTAO60888 179 aa6.13□□□□□ -1.43
VPS41-203ENST00000395969 ZRANB2O95218 330 aaKnown RBP eCLIP6.13□□□□□ -1.43
VPS41-203ENST00000395969 SLU7O95391 586 aaKnown RBP6.13□□□□□ -1.43
VPS41-203ENST00000395969 PLA2G4AP47712 749 aa6.13□□□□□ -1.43
VPS41-203ENST00000395969 TYRO3Q06418 890 aa6.13□□□□□ -1.43
VPS41-203ENST00000395969 WTAPQ15007 396 aa6.13□□□□□ -1.43
VPS41-203ENST00000395969 RBM26Q5T8P6 1007 aaKnown RBP6.13□□□□□ -1.43
VPS41-203ENST00000395969 BTNL9Q6UXG8 535 aa6.13□□□□□ -1.43
VPS41-203ENST00000395969 SH3RF1Q7Z6J0 888 aa6.13□□□□□ -1.43
VPS41-203ENST00000395969 LUZP1Q86V48 1076 aa6.13□□□□□ -1.43
VPS41-203ENST00000395969 GMCL1P1Q8NEA9 526 aa6.13□□□□□ -1.43
VPS41-203ENST00000395969 MBOAT7Q96N66 472 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms