RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 RAPGEF4Q8WZA2 1011 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 FMNL2Q96PY5 1086 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 TM6SF1Q9BZW5 370 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 IL25Q9H293 177 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 CYP46A1Q9Y6A2 500 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 A0A1B0GVL5 298 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 OPLAHO14841 1288 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 MYO1BO43795 1136 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 ELF3P78545 371 aaPredicted RBP10.84□□□□□ -0.67
CDRT1-204ENST00000395906 RESTQ13127 1097 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 TBX2Q13207 712 aaPredicted RBP10.84□□□□□ -0.67
CDRT1-204ENST00000395906 RIPK1Q13546 671 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 MYBPC2Q14324 1141 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 MYBPC3Q14896 1274 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 LACTB2Q53H82 288 aaPredicted RBP10.84□□□□□ -0.67
CDRT1-204ENST00000395906 ZNF569Q5MCW4 686 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 Q6ZUG5 572 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 NLRP14Q86W24 1093 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 CNKSR1Q969H4 720 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 CCT8L2Q96SF2 557 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 NAPGQ99747 312 aaPredicted RBP10.84□□□□□ -0.67
CDRT1-204ENST00000395906 PHACTR1Q9C0D0 580 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 LSG1Q9H089 658 aaKnown RBP10.84□□□□□ -0.67
CDRT1-204ENST00000395906 NOP53Q9NZM5 478 aaKnown RBP10.84□□□□□ -0.67
CDRT1-204ENST00000395906 BAIAP2L1Q9UHR4 511 aa10.84□□□□□ -0.67
CDRT1-204ENST00000395906 A0A1B0GVG6 124 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 RASSF10A6NK89 507 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 M0R2C6 588 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 DNM1LO00429 736 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 FAM107AO95990 144 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 NLRP12P59046 1061 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 PTGISQ16647 500 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 AKNAD1Q5T1N1 836 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 SFMBT2Q5VUG0 894 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 NUGGCQ68CJ6 796 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 MSL1Q68DK7 614 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 TEX9Q8N6V9 391 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 MYCBPAPQ8TBZ2 947 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 P3H4Q92791 437 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 DESI2Q9BSY9 194 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 ZSWIM6Q9HCJ5 1215 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 SLC5A4Q9NY91 659 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 KIAA1468Q9P260 1216 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 STAP2Q9UGK3 403 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 RCOR1Q9UKL0 485 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 STXBP3O00186 592 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 CNGA1P29973 690 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 SCTRP47872 440 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 PPP1R15BQ5SWA1 713 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 DDX54Q8TDD1 881 aaKnown RBP10.83□□□□□ -0.68
CDRT1-204ENST00000395906 DPF2Q92785 391 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 SDF4Q9BRK5 362 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 LZTFL1Q9NQ48 299 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 INCENPQ9NQS7 918 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 FANCLQ9NW38 375 aa10.83□□□□□ -0.68
CDRT1-204ENST00000395906 CAMTA1Q9Y6Y1 1673 aa10.82□□□□□ -0.68
CDRT1-204ENST00000395906 CHL1O00533 1208 aa10.82□□□□□ -0.68
CDRT1-204ENST00000395906 CYP27B1O15528 508 aa10.82□□□□□ -0.68
CDRT1-204ENST00000395906 SASH1O94885 1247 aa10.82□□□□□ -0.68
CDRT1-204ENST00000395906 ATP1A3P13637 1013 aa10.82□□□□□ -0.68
CDRT1-204ENST00000395906 EIF2S2P20042 333 aaKnown RBP10.82□□□□□ -0.68
CDRT1-204ENST00000395906 CDC25CP30307 473 aa10.82□□□□□ -0.68
CDRT1-204ENST00000395906 GJA8P48165 433 aa10.82□□□□□ -0.68
CDRT1-204ENST00000395906 HDLBPQ00341 1268 aaKnown RBP10.82□□□□□ -0.68
CDRT1-204ENST00000395906 CCDC15Q0P6D6 951 aa10.82□□□□□ -0.68
CDRT1-204ENST00000395906 MPP3Q13368 585 aa10.82□□□□□ -0.68
CDRT1-204ENST00000395906 DPY19L2Q6NUT2 758 aa10.82□□□□□ -0.68
CDRT1-204ENST00000395906 KDM7AQ6ZMT4 941 aa10.82□□□□□ -0.68
CDRT1-204ENST00000395906 TEKT4Q8WW24 435 aa10.82□□□□□ -0.68
CDRT1-204ENST00000395906 ZCWPW1Q9H0M4 648 aa10.82□□□□□ -0.68
CDRT1-204ENST00000395906 SENP2Q9HC62 589 aa10.82□□□□□ -0.68
CDRT1-204ENST00000395906 WDR35Q9P2L0 1181 aa10.82□□□□□ -0.68
CDRT1-204ENST00000395906 AOX1Q06278 1338 aa10.82□□□□□ -0.68
CDRT1-204ENST00000395906 ALDH3A1P30838 453 aa10.82□□□□□ -0.68
CDRT1-204ENST00000395906 SLC39A6Q13433 755 aa10.82□□□□□ -0.68
CDRT1-204ENST00000395906 CCNI2Q6ZMN8 369 aaPredicted RBP10.82□□□□□ -0.68
CDRT1-204ENST00000395906 SDR16C5Q8N3Y7 309 aa10.82□□□□□ -0.68
CDRT1-204ENST00000395906 TC2NQ8N9U0 490 aa10.82□□□□□ -0.68
CDRT1-204ENST00000395906 FSIP1Q8NA03 581 aa10.82□□□□□ -0.68
CDRT1-204ENST00000395906 L3MBTL3Q96JM7 780 aaPredicted RBP10.82□□□□□ -0.68
CDRT1-204ENST00000395906 ZWILCHQ9H900 591 aa10.82□□□□□ -0.68
CDRT1-204ENST00000395906 ANKIB1Q9P2G1 1089 aa10.82□□□□□ -0.68
CDRT1-204ENST00000395906 PHF24Q9UPV7 400 aa10.82□□□□□ -0.68
CDRT1-204ENST00000395906 LRRD1A4D1F6 860 aa10.81□□□□□ -0.68
CDRT1-204ENST00000395906 PPP1R37O75864 691 aa10.81□□□□□ -0.68
CDRT1-204ENST00000395906 NPTXRO95502 500 aa10.81□□□□□ -0.68
CDRT1-204ENST00000395906 MTX1Q13505 466 aa10.81□□□□□ -0.68
CDRT1-204ENST00000395906 C1orf141Q5JVX7 400 aa10.81□□□□□ -0.68
CDRT1-204ENST00000395906 EMC10Q5UCC4 262 aa10.81□□□□□ -0.68
CDRT1-204ENST00000395906 ARMC9Q7Z3E5 817 aa10.81□□□□□ -0.68
CDRT1-204ENST00000395906 SYCP3Q8IZU3 236 aa10.81□□□□□ -0.68
CDRT1-204ENST00000395906 PDILTQ8N807 584 aa10.81□□□□□ -0.68
CDRT1-204ENST00000395906 GDAP1L1Q96MZ0 367 aa10.81□□□□□ -0.68
CDRT1-204ENST00000395906 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.81□□□□□ -0.68
CDRT1-204ENST00000395906 OSBPL1AQ9BXW6 950 aa10.81□□□□□ -0.68
CDRT1-204ENST00000395906 OSBPL7Q9BZF2 842 aa10.81□□□□□ -0.68
CDRT1-204ENST00000395906 HSD3B7Q9H2F3 369 aa10.81□□□□□ -0.68
CDRT1-204ENST00000395906 ZNF510Q9Y2H8 683 aa10.81□□□□□ -0.68
CDRT1-204ENST00000395906 PRAMEF22A3QJZ6 481 aa10.81□□□□□ -0.68
CDRT1-204ENST00000395906 TMEM232C9JQI7 657 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms