RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 KIAA1468Q9P260 1216 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 NFE2L3Q9Y4A8 694 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 CSADQ9Y600 493 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 USP19O94966 1318 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 GAS7O60861 476 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 A1BGP04217 495 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 TFAP4Q01664 338 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 POTEDQ86YR6 584 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 ZNF594Q96JF6 807 aaPredicted RBP6.03□□□□□ -1.44
VPS13C-204ENST00000395898 TYW1Q9NV66 732 aaKnown RBP6.03□□□□□ -1.44
VPS13C-204ENST00000395898 WWC3Q9ULE0 1092 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 NDUFAB1O14561 156 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 N4BP1O75113 896 aaKnown RBP6.03□□□□□ -1.44
VPS13C-204ENST00000395898 DLGAP5Q15398 846 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 GRK7Q8WTQ7 553 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 PRPF31Q8WWY3 499 aaKnown RBP6.03□□□□□ -1.44
VPS13C-204ENST00000395898 RBSNQ9H1K0 784 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 ZFYVE16Q7Z3T8 1539 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 HSPA1LP34931 641 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 PABPC4Q13310 644 aaKnown RBP eCLIP6.03□□□□□ -1.44
VPS13C-204ENST00000395898 P3H4Q92791 437 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 PTPRTO14522 1441 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 PHBP35232 272 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 IFIH1Q9BYX4 1025 aaKnown RBP6.03□□□□□ -1.44
VPS13C-204ENST00000395898 NCOA5Q9HCD5 579 aaKnown RBP6.03□□□□□ -1.44
VPS13C-204ENST00000395898 AMFRQ9UKV5 643 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 TRPC6Q9Y210 931 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 SMCO2A6NFE2 343 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 LAD1O00515 517 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 NR1I2O75469 434 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 TNNI1P19237 187 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 MAP7Q14244 749 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 MUM1L1Q5H9M0 696 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 ARHGEF16Q5VV41 709 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 SMCR8Q8TEV9 937 aaPredicted RBP6.03□□□□□ -1.44
VPS13C-204ENST00000395898 CBX8Q9HC52 389 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 I3L4J1 428 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 ZAP70P43403 619 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 TCP10Q12799 353 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 TCIRG1Q13488 830 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 CEP85LQ5SZL2 805 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 BEND3Q5T5X7 828 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 TGFBRAP1Q8WUH2 860 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 SUCLG2Q96I99 432 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 PKD2L1Q9P0L9 805 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 TACC3Q9Y6A5 838 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 TTC37Q6PGP7 1564 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 MLH3Q9UHC1 1453 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 FAM135BQ49AJ0 1406 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 HPDP32754 393 aaPredicted RBP6.03□□□□□ -1.44
VPS13C-204ENST00000395898 ZNF75DP51815 510 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 CCDC105Q8IYK2 499 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 CPXCR1Q8N123 301 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 ZSCAN10Q96SZ4 725 aaPredicted RBP6.03□□□□□ -1.44
VPS13C-204ENST00000395898 SAR1BQ9Y6B6 198 aa6.03□□□□□ -1.44
VPS13C-204ENST00000395898 RPS8P62241 208 aaKnown RBP6.02□□□□□ -1.45
VPS13C-204ENST00000395898 IRX4P78413 519 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 IRX3P78415 501 aaPredicted RBP6.02□□□□□ -1.45
VPS13C-204ENST00000395898 PPARAQ07869 468 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 MFSD14BQ5SR56 506 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 GKAP1Q5VSY0 366 aaPredicted RBP6.02□□□□□ -1.45
VPS13C-204ENST00000395898 MAEAQ7L5Y9 396 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 MAGEF1Q9HAY2 307 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 DMP1Q13316 513 aaPredicted RBP6.02□□□□□ -1.45
VPS13C-204ENST00000395898 SH2D4BQ5SQS7 431 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 DCAF15Q66K64 600 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 MCF2L2Q86YR7 1114 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 PFDN4Q9NQP4 134 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 VPS54Q9P1Q0 977 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 CTTNBP2NLQ9P2B4 639 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 EIF4A1P60842 406 aaKnown RBP6.02□□□□□ -1.45
VPS13C-204ENST00000395898 DPY19L2Q6NUT2 758 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 ERBB4Q15303 1308 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 NEO1Q92859 1461 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 SEC24BO95487 1268 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 TBC1D8O95759 1140 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 GABPAQ06546 454 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 ZNF654Q8IZM8 581 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 PSTPIP2Q9H939 334 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 ZHX1Q9UKY1 873 aaPredicted RBP6.02□□□□□ -1.45
VPS13C-204ENST00000395898 DDX39AO00148 427 aaKnown RBP6.02□□□□□ -1.45
VPS13C-204ENST00000395898 MAGEA1P43355 309 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 CTDSPL2Q05D32 466 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 HADHQ16836 314 aaKnown RBP6.02□□□□□ -1.45
VPS13C-204ENST00000395898 CASC4Q6P4E1 433 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 CDC37L1Q7L3B6 337 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 DYMQ7RTS9 669 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 RSAD2Q8WXG1 361 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 LGR6Q9HBX8 967 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 LARSQ9P2J5 1176 aaKnown RBP6.02□□□□□ -1.45
VPS13C-204ENST00000395898 MRPL11Q9Y3B7 192 aaKnown RBP6.02□□□□□ -1.45
VPS13C-204ENST00000395898 CROCC2H7BZ55 1655 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 SLC12A2P55011 1212 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 MAPK8IP2Q13387 824 aaPredicted RBP6.02□□□□□ -1.45
VPS13C-204ENST00000395898 ATP2B4P23634 1241 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 TMOD1P28289 359 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 KRBA2Q6ZNG9 492 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 GINS2Q9Y248 185 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 ZMYM6O95789 1325 aa6.02□□□□□ -1.45
VPS13C-204ENST00000395898 SPHKAPQ2M3C7 1700 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms