RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 ELOA2Q8IYF1 753 aaPredicted RBP3.81□□□□□ -1.8
VPS13C-203ENST00000395896 BLIDQ8IZY5 108 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 RETREG2Q8NC44 543 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 DDX12PQ92771 950 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 IKBKBO14920 756 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 ADCY7P51828 1080 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 STYK1Q6J9G0 422 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 CCDC51Q96ER9 411 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 TAOK3Q9H2K8 898 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 LMBRD1Q9NUN5 540 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 PIM2Q9P1W9 311 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 MYO18AQ92614 2054 aaKnown RBP3.81□□□□□ -1.8
VPS13C-203ENST00000395896 ANKRD12Q6UB98 2062 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 DUOX1Q9NRD9 1551 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 N4BP3O15049 544 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 ERLIN2O94905 339 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 ERFEQ4G0M1 354 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 JPH2Q9BR39 696 aaPredicted RBP3.81□□□□□ -1.8
VPS13C-203ENST00000395896 IDEP14735 1019 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 COPB2P35606 906 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 SCRN1Q12765 414 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 VWA3BQ502W6 1294 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 UBXN4Q92575 508 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 VTI1AQ96AJ9 217 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 NSUN4Q96CB9 384 aaKnown RBP3.81□□□□□ -1.8
VPS13C-203ENST00000395896 KAZALD1Q96I82 304 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 POTEB2H3BUK9 544 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 FMNL1O95466 1100 aaPredicted RBP3.81□□□□□ -1.8
VPS13C-203ENST00000395896 XRCC6P12956 609 aaKnown RBP eCLIP3.81□□□□□ -1.8
VPS13C-203ENST00000395896 PICALMQ13492 652 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 ADCK5Q3MIX3 580 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 PDILTQ8N807 584 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 LPAR1Q92633 364 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 SLC5A4Q9NY91 659 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 ADD3Q9UEY8 706 aaKnown RBP3.81□□□□□ -1.8
VPS13C-203ENST00000395896 PHLPP2Q6ZVD8 1323 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 TULP1O00294 542 aaPredicted RBP3.81□□□□□ -1.8
VPS13C-203ENST00000395896 NTSR2O95665 410 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 PPP4R3CPQ6ZMV5 832 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 RUFY1Q96T51 708 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 LRRC2Q9BYS8 371 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 PUS7LQ9H0K6 701 aaKnown RBP3.81□□□□□ -1.8
VPS13C-203ENST00000395896 MYH15Q9Y2K3 1946 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 MMP1P03956 469 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 CCDC175P0C221 793 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 STAT2P52630 851 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 ANO6Q4KMQ2 910 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 TTC38Q5R3I4 469 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 C15orf52Q6ZUT6 534 aaKnown RBP3.81□□□□□ -1.8
VPS13C-203ENST00000395896 SPZ1Q9BXG8 430 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 CLSTN2Q9H4D0 955 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 STK17AQ9UEE5 414 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 MAFGO15525 162 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 ARHGAP6O43182 974 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 POSTNQ15063 836 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 CAMK4Q16566 473 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 GDPD2Q9HCC8 539 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 MTMR7Q9Y216 660 aa3.81□□□□□ -1.8
VPS13C-203ENST00000395896 SH2B2O14492 632 aaPredicted RBP3.8□□□□□ -1.8
VPS13C-203ENST00000395896 SSBP05455 408 aaKnown RBP eCLIP3.8□□□□□ -1.8
VPS13C-203ENST00000395896 ICA1Q05084 483 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 FAM84BQ96KN1 310 aaPredicted RBP3.8□□□□□ -1.8
VPS13C-203ENST00000395896 RPGRIP1Q96KN7 1286 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 TRIM47Q96LD4 638 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 ALS2CR12Q96Q35 445 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 MXD3Q9BW11 206 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 TANGO6Q9C0B7 1094 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 DCP1AQ9NPI6 582 aaPredicted RBP3.8□□□□□ -1.8
VPS13C-203ENST00000395896 MRPL11Q9Y3B7 192 aaKnown RBP3.8□□□□□ -1.8
VPS13C-203ENST00000395896 FKBP1AP62942 108 aaKnown RBP3.8□□□□□ -1.8
VPS13C-203ENST00000395896 GUCY1B3Q02153 619 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 NSUN7Q8NE18 718 aaKnown RBP3.8□□□□□ -1.8
VPS13C-203ENST00000395896 CSRNP1Q96S65 589 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 IMPG2Q9BZV3 1241 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 MAP3K20Q9NYL2 800 aaKnown RBP3.8□□□□□ -1.8
VPS13C-203ENST00000395896 MYH14Q7Z406 1995 aaKnown RBP3.8□□□□□ -1.8
VPS13C-203ENST00000395896 USP17L8P0C7I0 530 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 NFIXQ14938 502 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 CALCRLQ16602 461 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 ZNF589Q86UQ0 364 aaPredicted RBP3.8□□□□□ -1.8
VPS13C-203ENST00000395896 LINC00301Q8NCQ3 95 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 RBM46Q8TBY0 533 aaKnown RBP3.8□□□□□ -1.8
VPS13C-203ENST00000395896 SPAG5Q96R06 1193 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 NUP88Q99567 741 aaPredicted RBP3.8□□□□□ -1.8
VPS13C-203ENST00000395896 PALD1Q9ULE6 856 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 SAMM50Q9Y512 469 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 MROH7-TTC4A0A0A0MT08 1334 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 FAM205AQ6ZU69 1335 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 FBXO33Q7Z6M2 555 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 FAM160B2Q86V87 743 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 FCHSD1Q86WN1 690 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 CNPY4Q8N129 248 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 SAMD3Q8N6K7 520 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 NEDD1Q8NHV4 660 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 WDR11Q9BZH6 1224 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 MAF1Q9H063 256 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 LUC7L2Q9Y383 392 aaKnown RBP3.8□□□□□ -1.8
VPS13C-203ENST00000395896 CSADQ9Y600 493 aa3.8□□□□□ -1.8
VPS13C-203ENST00000395896 ADD1P35611 737 aaKnown RBP3.8□□□□□ -1.8
VPS13C-203ENST00000395896 EXOSC10Q01780 885 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms