RNA–Protein interactions for RNA: ENST00000395841.6

RAE1-203, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-203ENST00000395841 USP5P45974 858 aa12.88□□□□□ -0.35
RAE1-203ENST00000395841 KCNJ6P48051 423 aa12.88□□□□□ -0.35
RAE1-203ENST00000395841 USP49Q70CQ1 688 aa12.88□□□□□ -0.35
RAE1-203ENST00000395841 ZNF804AQ7Z570 1209 aa12.88□□□□□ -0.35
RAE1-203ENST00000395841 PDILTQ8N807 584 aa12.88□□□□□ -0.35
RAE1-203ENST00000395841 SPATA20Q8TB22 786 aa12.88□□□□□ -0.35
RAE1-203ENST00000395841 FANCLQ9NW38 375 aa12.88□□□□□ -0.35
RAE1-203ENST00000395841 MYH2Q9UKX2 1941 aa12.88□□□□□ -0.35
RAE1-203ENST00000395841 NRDCO43847 1150 aa12.88□□□□□ -0.35
RAE1-203ENST00000395841 BAG3O95817 575 aa12.88□□□□□ -0.35
RAE1-203ENST00000395841 ADRA2BP18089 450 aa12.88□□□□□ -0.35
RAE1-203ENST00000395841 PTPN14Q15678 1187 aa12.88□□□□□ -0.35
RAE1-203ENST00000395841 PFKFB3Q16875 520 aaPredicted RBP12.88□□□□□ -0.35
RAE1-203ENST00000395841 TTC38Q5R3I4 469 aa12.88□□□□□ -0.35
RAE1-203ENST00000395841 DGKHQ86XP1 1220 aa12.88□□□□□ -0.35
RAE1-203ENST00000395841 TSC1Q92574 1164 aa12.88□□□□□ -0.35
RAE1-203ENST00000395841 KAT14Q9H8E8 782 aa12.88□□□□□ -0.35
RAE1-203ENST00000395841 ROBO3Q96MS0 1386 aa12.87□□□□□ -0.35
RAE1-203ENST00000395841 PPP4CP60510 307 aa12.87□□□□□ -0.35
RAE1-203ENST00000395841 CFAP100Q494V2 611 aa12.87□□□□□ -0.35
RAE1-203ENST00000395841 SH3RF3Q8TEJ3 882 aaPredicted RBP12.87□□□□□ -0.35
RAE1-203ENST00000395841 ANKS1AQ92625 1134 aa12.87□□□□□ -0.35
RAE1-203ENST00000395841 PDGFDQ9GZP0 370 aaPredicted RBP12.87□□□□□ -0.35
RAE1-203ENST00000395841 SLFN14P0C7P3 912 aa12.87□□□□□ -0.35
RAE1-203ENST00000395841 TRAPPC10P48553 1259 aa12.87□□□□□ -0.35
RAE1-203ENST00000395841 NLRP5P59047 1200 aa12.87□□□□□ -0.35
RAE1-203ENST00000395841 TFAP4Q01664 338 aa12.87□□□□□ -0.35
RAE1-203ENST00000395841 SLC4A8Q2Y0W8 1093 aa12.87□□□□□ -0.35
RAE1-203ENST00000395841 CCDC178Q5BJE1 867 aa12.87□□□□□ -0.35
RAE1-203ENST00000395841 AMOTL1Q8IY63 956 aa12.87□□□□□ -0.35
RAE1-203ENST00000395841 GRAMD1CQ8IYS0 662 aa12.87□□□□□ -0.35
RAE1-203ENST00000395841 ZNF710Q8N1W2 664 aa12.87□□□□□ -0.35
RAE1-203ENST00000395841 ENOX1Q8TC92 643 aaKnown RBP12.87□□□□□ -0.35
RAE1-203ENST00000395841 DPF2Q92785 391 aa12.87□□□□□ -0.35
RAE1-203ENST00000395841 LDHCP07864 332 aa12.86□□□□□ -0.35
RAE1-203ENST00000395841 ATP2C1P98194 919 aaPredicted RBP12.86□□□□□ -0.35
RAE1-203ENST00000395841 EPSTI1Q96J88 318 aa12.86□□□□□ -0.35
RAE1-203ENST00000395841 CCDC88AQ3V6T2 1871 aa12.86□□□□□ -0.35
RAE1-203ENST00000395841 UBR3Q6ZT12 1888 aa12.86□□□□□ -0.35
RAE1-203ENST00000395841 A0A087X0B3 334 aa12.86□□□□□ -0.35
RAE1-203ENST00000395841 WNT7AO00755 349 aa12.86□□□□□ -0.35
RAE1-203ENST00000395841 EN1Q05925 392 aaPredicted RBP12.86□□□□□ -0.35
RAE1-203ENST00000395841 ZNF174Q15697 407 aa12.86□□□□□ -0.35
RAE1-203ENST00000395841 NOM1Q5C9Z4 860 aaKnown RBP12.86□□□□□ -0.35
RAE1-203ENST00000395841 CT47A1Q5JQC4 288 aaPredicted RBP12.86□□□□□ -0.35
RAE1-203ENST00000395841 SLC27A3Q5K4L6 730 aa12.86□□□□□ -0.35
RAE1-203ENST00000395841 CERS3Q8IU89 383 aa12.86□□□□□ -0.35
RAE1-203ENST00000395841 VSTM4Q8IW00 320 aa12.86□□□□□ -0.35
RAE1-203ENST00000395841 CCDC112Q8NEF3 446 aa12.86□□□□□ -0.35
RAE1-203ENST00000395841 SYMPKQ92797 1274 aaKnown RBP12.86□□□□□ -0.35
RAE1-203ENST00000395841 RPGRQ92834 1020 aaKnown RBP12.86□□□□□ -0.35
RAE1-203ENST00000395841 DHX58Q96C10 678 aa12.86□□□□□ -0.35
RAE1-203ENST00000395841 IL17RBQ9NRM6 502 aa12.86□□□□□ -0.35
RAE1-203ENST00000395841 TRMT1Q9NXH9 659 aaKnown RBP12.86□□□□□ -0.35
RAE1-203ENST00000395841 MYH6P13533 1939 aa12.85□□□□□ -0.35
RAE1-203ENST00000395841 PSDA5PKW4 1024 aaPredicted RBP12.85□□□□□ -0.35
RAE1-203ENST00000395841 KIF2AO00139 706 aaPredicted RBP12.85□□□□□ -0.35
RAE1-203ENST00000395841 CALML3P27482 149 aa12.85□□□□□ -0.35
RAE1-203ENST00000395841 FMR1Q06787 632 aaKnown RBP eCLIP12.85□□□□□ -0.351e-12■■■■■ 44.3
RAE1-203ENST00000395841 SH3RF1Q7Z6J0 888 aa12.85□□□□□ -0.35
RAE1-203ENST00000395841 PNMA1Q8ND90 353 aa12.85□□□□□ -0.35
RAE1-203ENST00000395841 MKNK2Q9HBH9 465 aa12.85□□□□□ -0.35
RAE1-203ENST00000395841 SH3GLB2Q9NR46 395 aa12.85□□□□□ -0.35
RAE1-203ENST00000395841 ZNF18P17022 549 aa12.85□□□□□ -0.35
RAE1-203ENST00000395841 ERCC5P28715 1186 aaPredicted RBP12.85□□□□□ -0.35
RAE1-203ENST00000395841 GPSM2P81274 684 aa12.85□□□□□ -0.35
RAE1-203ENST00000395841 PTGDRQ13258 359 aa12.85□□□□□ -0.35
RAE1-203ENST00000395841 DIXDC1Q155Q3 683 aa12.85□□□□□ -0.35
RAE1-203ENST00000395841 GRIK5Q16478 980 aa12.85□□□□□ -0.35
RAE1-203ENST00000395841 CRY2Q49AN0 593 aa12.85□□□□□ -0.35
RAE1-203ENST00000395841 E4F1Q66K89 784 aaPredicted RBP12.85□□□□□ -0.35
RAE1-203ENST00000395841 DYNLL2Q96FJ2 89 aa12.85□□□□□ -0.35
RAE1-203ENST00000395841 PAGE5Q96GU1 130 aa12.85□□□□□ -0.35
RAE1-203ENST00000395841 TCP11L1Q9NUJ3 509 aa12.85□□□□□ -0.35
RAE1-203ENST00000395841 NFE2L3Q9Y4A8 694 aa12.85□□□□□ -0.35
RAE1-203ENST00000395841 POLRMTO00411 1230 aaKnown RBP12.84□□□□□ -0.35
RAE1-203ENST00000395841 GNAQP50148 359 aa12.84□□□□□ -0.35
RAE1-203ENST00000395841 PLCD1P51178 756 aa12.84□□□□□ -0.35
RAE1-203ENST00000395841 GRM4Q14833 912 aa12.84□□□□□ -0.35
RAE1-203ENST00000395841 SYCP1Q15431 976 aa12.84□□□□□ -0.35
RAE1-203ENST00000395841 EZH2Q15910 746 aaKnown RBP12.84□□□□□ -0.35
RAE1-203ENST00000395841 PIK3AP1Q6ZUJ8 805 aa12.84□□□□□ -0.35
RAE1-203ENST00000395841 ZNF592Q92610 1267 aa12.84□□□□□ -0.35
RAE1-203ENST00000395841 TOP1P11387 765 aaKnown RBP12.84□□□□□ -0.35
RAE1-203ENST00000395841 ATP2B4P23634 1241 aa12.84□□□□□ -0.35
RAE1-203ENST00000395841 TGFBRAP1Q8WUH2 860 aa12.84□□□□□ -0.35
RAE1-203ENST00000395841 RTFDC1Q9BY42 306 aaPredicted RBP12.84□□□□□ -0.35
RAE1-203ENST00000395841 ZNF219Q9P2Y4 722 aaPredicted RBP12.84□□□□□ -0.35
RAE1-203ENST00000395841 VWA3AA6NCI4 1184 aa12.83□□□□□ -0.36
RAE1-203ENST00000395841 TSPY3P0CV98 308 aa12.83□□□□□ -0.36
RAE1-203ENST00000395841 TSPY8P0CW00 308 aa12.83□□□□□ -0.36
RAE1-203ENST00000395841 VEGFAP15692 232 aaPredicted RBP12.83□□□□□ -0.36
RAE1-203ENST00000395841 ST5P78524 1137 aa12.83□□□□□ -0.36
RAE1-203ENST00000395841 ZNF444Q8N0Y2 327 aaPredicted RBP12.83□□□□□ -0.36
RAE1-203ENST00000395841 GSDMAQ96QA5 445 aa12.83□□□□□ -0.36
RAE1-203ENST00000395841 PYM1Q9BRP8 204 aaKnown RBP12.83□□□□□ -0.36
RAE1-203ENST00000395841 CD209Q9NNX6 404 aa12.83□□□□□ -0.36
RAE1-203ENST00000395841 INTS13Q9NVM9 706 aa12.83□□□□□ -0.36
RAE1-203ENST00000395841 TMEM232C9JQI7 657 aa12.83□□□□□ -0.36
RAE1-203ENST00000395841 UFL1O94874 794 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms