RNA–Protein interactions for RNA: ENST00000395736.7

TOM1-202, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-202ENST00000395736 USP17L18D6R9N7 530 aa13.25□□□□□ -0.29
TOM1-202ENST00000395736 USP17L22D6RA61 530 aa13.25□□□□□ -0.29
TOM1-202ENST00000395736 USP17L17D6RBQ6 530 aa13.25□□□□□ -0.29
TOM1-202ENST00000395736 USP17L19D6RCP7 530 aa13.25□□□□□ -0.29
TOM1-202ENST00000395736 USP17L20D6RJB6 530 aa13.25□□□□□ -0.29
TOM1-202ENST00000395736 MPHOSPH10O00566 681 aaKnown RBP13.25□□□□□ -0.29
TOM1-202ENST00000395736 PLA2G5P39877 138 aa13.25□□□□□ -0.29
TOM1-202ENST00000395736 USP14P54578 494 aa13.25□□□□□ -0.29
TOM1-202ENST00000395736 USP17L24Q0WX57 530 aa13.25□□□□□ -0.29
TOM1-202ENST00000395736 TRIM32Q13049 653 aa13.25□□□□□ -0.29
TOM1-202ENST00000395736 CTR9Q6PD62 1173 aa13.25□□□□□ -0.29
TOM1-202ENST00000395736 TMEM179Q6ZVK1 233 aa13.25□□□□□ -0.29
TOM1-202ENST00000395736 C16orf86Q6ZW13 317 aa13.25□□□□□ -0.29
TOM1-202ENST00000395736 GPRC5AQ8NFJ5 357 aa13.25□□□□□ -0.29
TOM1-202ENST00000395736 GPATCH3Q96I76 525 aa13.25□□□□□ -0.29
TOM1-202ENST00000395736 PAGR1Q9BTK6 254 aa13.25□□□□□ -0.29
TOM1-202ENST00000395736 RPAP3Q9H6T3 665 aaPredicted RBP13.25□□□□□ -0.29
TOM1-202ENST00000395736 EPB41L4AQ9HCS5 686 aaPredicted RBP13.25□□□□□ -0.29
TOM1-202ENST00000395736 PAK6Q9NQU5 681 aaPredicted RBP13.25□□□□□ -0.29
TOM1-202ENST00000395736 SWAP70Q9UH65 585 aa13.25□□□□□ -0.29
TOM1-202ENST00000395736 TAOK2Q9UL54 1235 aa13.25□□□□□ -0.29
TOM1-202ENST00000395736 ROBO3Q96MS0 1386 aa13.24□□□□□ -0.29
TOM1-202ENST00000395736 TTC41PQ6P2S7 1318 aa13.24□□□□□ -0.29
TOM1-202ENST00000395736 SPDYE16A6NNV3 312 aaPredicted RBP13.24□□□□□ -0.29
TOM1-202ENST00000395736 GSG1L2A8MUP6 293 aa13.24□□□□□ -0.29
TOM1-202ENST00000395736 POTEB2H3BUK9 544 aa13.24□□□□□ -0.29
TOM1-202ENST00000395736 M0R2C6 588 aa13.24□□□□□ -0.29
TOM1-202ENST00000395736 SGPL1O95470 568 aa13.24□□□□□ -0.29
TOM1-202ENST00000395736 CDK8P49336 464 aa13.24□□□□□ -0.29
TOM1-202ENST00000395736 LBX2Q6XYB7 198 aa13.24□□□□□ -0.29
TOM1-202ENST00000395736 TDHQ8IZJ6 230 aa13.24□□□□□ -0.29
TOM1-202ENST00000395736 GTF3C2Q8WUA4 911 aaPredicted RBP13.24□□□□□ -0.29
TOM1-202ENST00000395736 TRIB2Q92519 343 aa13.24□□□□□ -0.29
TOM1-202ENST00000395736 APPBP2Q92624 585 aa13.24□□□□□ -0.29
TOM1-202ENST00000395736 USP6NLQ92738 828 aa13.24□□□□□ -0.29
TOM1-202ENST00000395736 BTBD7Q9P203 1132 aa13.24□□□□□ -0.29
TOM1-202ENST00000395736 ZMYND8Q9ULU4 1186 aaPredicted RBP13.24□□□□□ -0.29
TOM1-202ENST00000395736 ZNF236Q9UL36 1845 aa13.24□□□□□ -0.29
TOM1-202ENST00000395736 COL11A1P12107 1806 aaPredicted RBP13.23□□□□□ -0.29
TOM1-202ENST00000395736 FRMPD3Q5JV73 1810 aa13.23□□□□□ -0.29
TOM1-202ENST00000395736 RNF113AO15541 343 aaKnown RBP13.23□□□□□ -0.29
TOM1-202ENST00000395736 HMGCRP04035 888 aa13.23□□□□□ -0.29
TOM1-202ENST00000395736 MAGEA10P43363 369 aaPredicted RBP13.23□□□□□ -0.29
TOM1-202ENST00000395736 GPR142Q7Z601 462 aa13.23□□□□□ -0.29
TOM1-202ENST00000395736 DIS3LQ8TF46 1054 aaKnown RBP13.23□□□□□ -0.29
TOM1-202ENST00000395736 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.23□□□□□ -0.29
TOM1-202ENST00000395736 ARPP21Q9UBL0 812 aaPredicted RBP13.23□□□□□ -0.29
TOM1-202ENST00000395736 RABGAP1Q9Y3P9 1069 aa13.23□□□□□ -0.29
TOM1-202ENST00000395736 GPAA1O43292 621 aa13.22□□□□□ -0.29
TOM1-202ENST00000395736 SYN1P17600 705 aa13.22□□□□□ -0.29
TOM1-202ENST00000395736 MX1P20591 662 aa13.22□□□□□ -0.29
TOM1-202ENST00000395736 CYP2B6P20813 491 aa13.22□□□□□ -0.29
TOM1-202ENST00000395736 MAPK4P31152 587 aa13.22□□□□□ -0.29
TOM1-202ENST00000395736 HOXD11P31277 338 aaPredicted RBP13.22□□□□□ -0.29
TOM1-202ENST00000395736 ICA1Q05084 483 aa13.22□□□□□ -0.29
TOM1-202ENST00000395736 SBK1Q52WX2 424 aa13.22□□□□□ -0.29
TOM1-202ENST00000395736 MORN1Q5T089 497 aa13.22□□□□□ -0.29
TOM1-202ENST00000395736 C7orf61Q8IZ16 206 aa13.22□□□□□ -0.29
TOM1-202ENST00000395736 SOCS4Q8WXH5 440 aa13.22□□□□□ -0.29
TOM1-202ENST00000395736 PAWRQ96IZ0 340 aaKnown RBP13.22□□□□□ -0.29
TOM1-202ENST00000395736 FAM161BQ96MY7 647 aa13.22□□□□□ -0.29
TOM1-202ENST00000395736 DEFB118Q96PH6 123 aa13.22□□□□□ -0.29
TOM1-202ENST00000395736 SEC62Q99442 399 aaKnown RBP13.22□□□□□ -0.29
TOM1-202ENST00000395736 CRISPLD2Q9H0B8 497 aa13.22□□□□□ -0.29
TOM1-202ENST00000395736 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.22□□□□□ -0.29
TOM1-202ENST00000395736 TMX2Q9Y320 296 aa13.22□□□□□ -0.29
TOM1-202ENST00000395736 GLRX3O76003 335 aaKnown RBP13.21□□□□□ -0.29
TOM1-202ENST00000395736 ZFYP08048 801 aaPredicted RBP13.21□□□□□ -0.29
TOM1-202ENST00000395736 HDAC1Q13547 482 aaPredicted RBP13.21□□□□□ -0.29
TOM1-202ENST00000395736 CCL14Q16627 93 aa13.21□□□□□ -0.29
TOM1-202ENST00000395736 MAP3K21Q5TCX8 1036 aa13.21□□□□□ -0.29
TOM1-202ENST00000395736 PLEKHH3Q7Z736 793 aa13.21□□□□□ -0.29
TOM1-202ENST00000395736 CCDC17Q96LX7 622 aa13.21□□□□□ -0.29
TOM1-202ENST00000395736 NUDT12Q9BQG2 462 aa13.21□□□□□ -0.29
TOM1-202ENST00000395736 FOXP2O15409 715 aa13.2□□□□□ -0.3
TOM1-202ENST00000395736 XRCC5P13010 732 aaKnown RBP13.2□□□□□ -0.3
TOM1-202ENST00000395736 EEF2P13639 858 aaKnown RBP13.2□□□□□ -0.3
TOM1-202ENST00000395736 RASA1P20936 1047 aa13.2□□□□□ -0.3
TOM1-202ENST00000395736 GIMAP6Q6P9H5 292 aa13.2□□□□□ -0.3
TOM1-202ENST00000395736 AMOTL1Q8IY63 956 aa13.2□□□□□ -0.3
TOM1-202ENST00000395736 SPICE1Q8N0Z3 855 aa13.2□□□□□ -0.3
TOM1-202ENST00000395736 DDRGK1Q96HY6 314 aa13.2□□□□□ -0.3
TOM1-202ENST00000395736 TANGO6Q9C0B7 1094 aa13.2□□□□□ -0.3
TOM1-202ENST00000395736 VCPKMTQ9H867 229 aa13.2□□□□□ -0.3
TOM1-202ENST00000395736 MYH4Q9Y623 1939 aa13.19□□□□□ -0.3
TOM1-202ENST00000395736 ERC2O15083 957 aa13.19□□□□□ -0.3
TOM1-202ENST00000395736 ZMYM1Q5SVZ6 1142 aa13.19□□□□□ -0.3
TOM1-202ENST00000395736 ANKRD45Q5TZF3 282 aa13.19□□□□□ -0.3
TOM1-202ENST00000395736 STK11IPQ8N1F8 1099 aa13.19□□□□□ -0.3
TOM1-202ENST00000395736 LPAR1Q92633 364 aa13.19□□□□□ -0.3
TOM1-202ENST00000395736 APBA2Q99767 749 aa13.19□□□□□ -0.3
TOM1-202ENST00000395736 FSD1Q9BTV5 496 aa13.19□□□□□ -0.3
TOM1-202ENST00000395736 ARHGEF10LQ9HCE6 1279 aa13.19□□□□□ -0.3
TOM1-202ENST00000395736 FLRT1Q9NZU1 646 aa13.19□□□□□ -0.3
TOM1-202ENST00000395736 MINDY4BA8MYZ0 360 aa13.18□□□□□ -0.3
TOM1-202ENST00000395736 PRKAR2AP13861 404 aaKnown RBP13.18□□□□□ -0.3
TOM1-202ENST00000395736 ZKSCAN1P17029 563 aaPredicted RBP13.18□□□□□ -0.3
TOM1-202ENST00000395736 PTPREP23469 700 aa13.18□□□□□ -0.3
TOM1-202ENST00000395736 DSG3P32926 999 aa13.18□□□□□ -0.3
TOM1-202ENST00000395736 RGS2P41220 211 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms