RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 CDC27P30260 824 aa22.4■■□□□ 1.18
LMNB1-202ENST00000395354 ADD1P35611 737 aaKnown RBP22.4■■□□□ 1.18
LMNB1-202ENST00000395354 UBE2HP62256 183 aa22.4■■□□□ 1.18
LMNB1-202ENST00000395354 NTRK3Q16288 839 aa22.4■■□□□ 1.18
LMNB1-202ENST00000395354 ZNF444Q8N0Y2 327 aaPredicted RBP22.4■■□□□ 1.18
LMNB1-202ENST00000395354 ZKSCAN3Q9BRR0 538 aa22.4■■□□□ 1.18
LMNB1-202ENST00000395354 SCAND2PQ9GZW5 306 aaPredicted RBP22.4■■□□□ 1.18
LMNB1-202ENST00000395354 IFNAR1P17181 557 aa22.39■■□□□ 1.18
LMNB1-202ENST00000395354 CERKLQ49MI3 558 aaPredicted RBP22.39■■□□□ 1.18
LMNB1-202ENST00000395354 CCDC178Q5BJE1 867 aa22.39■■□□□ 1.18
LMNB1-202ENST00000395354 RAB11FIP4Q86YS3 637 aa22.39■■□□□ 1.18
LMNB1-202ENST00000395354 ZNF654Q8IZM8 581 aa22.39■■□□□ 1.18
LMNB1-202ENST00000395354 ENAHQ8N8S7 591 aaPredicted RBP22.39■■□□□ 1.18
LMNB1-202ENST00000395354 C8orf76Q96K31 380 aa22.39■■□□□ 1.18
LMNB1-202ENST00000395354 GDPD2Q9HCC8 539 aa22.39■■□□□ 1.18
LMNB1-202ENST00000395354 PHF20L1A8MW92 1017 aa22.38■■□□□ 1.17
LMNB1-202ENST00000395354 CELF2O95319 508 aaKnown RBP22.38■■□□□ 1.17
LMNB1-202ENST00000395354 CALM1P0DP23 149 aa22.38■■□□□ 1.17
LMNB1-202ENST00000395354 CALM2P0DP24 149 aa22.38■■□□□ 1.17
LMNB1-202ENST00000395354 CALM3P0DP25 149 aa22.38■■□□□ 1.17
LMNB1-202ENST00000395354 RASA1P20936 1047 aa22.38■■□□□ 1.17
LMNB1-202ENST00000395354 TTLL12Q14166 644 aaPredicted RBP22.38■■□□□ 1.17
LMNB1-202ENST00000395354 RTN1Q16799 776 aa22.38■■□□□ 1.17
LMNB1-202ENST00000395354 FIBPO43427 364 aa22.38■■□□□ 1.17
LMNB1-202ENST00000395354 FSTL1Q12841 308 aa22.38■■□□□ 1.17
LMNB1-202ENST00000395354 RRP1BQ14684 758 aaKnown RBP22.38■■□□□ 1.17
LMNB1-202ENST00000395354 IFIT1BQ5T764 474 aaKnown RBP22.38■■□□□ 1.17
LMNB1-202ENST00000395354 FBXO18Q8NFZ0 1043 aa22.38■■□□□ 1.17
LMNB1-202ENST00000395354 WASF1Q92558 559 aa22.38■■□□□ 1.17
LMNB1-202ENST00000395354 SYAP1Q96A49 352 aaPredicted RBP22.38■■□□□ 1.17
LMNB1-202ENST00000395354 KLRG1Q96E93 195 aa22.38■■□□□ 1.17
LMNB1-202ENST00000395354 ZNF112Q9UJU3 913 aa22.38■■□□□ 1.17
LMNB1-202ENST00000395354 CFAP45Q9UL16 551 aa22.38■■□□□ 1.17
LMNB1-202ENST00000395354 PASKQ96RG2 1323 aa22.37■■□□□ 1.17
LMNB1-202ENST00000395354 TCHHQ07283 1943 aa22.37■■□□□ 1.17
LMNB1-202ENST00000395354 FSD2A1L4K1 749 aa22.37■■□□□ 1.17
LMNB1-202ENST00000395354 CST9Q5W186 159 aa22.37■■□□□ 1.17
LMNB1-202ENST00000395354 CAVIN1Q6NZI2 390 aaKnown RBP22.37■■□□□ 1.17
LMNB1-202ENST00000395354 FANCBQ8NB91 859 aa22.37■■□□□ 1.17
LMNB1-202ENST00000395354 CCDC17Q96LX7 622 aa22.37■■□□□ 1.17
LMNB1-202ENST00000395354 WRNIP1Q96S55 665 aa22.37■■□□□ 1.17
LMNB1-202ENST00000395354 DDAH1O94760 285 aa22.36■■□□□ 1.17
LMNB1-202ENST00000395354 FMNL1O95466 1100 aaPredicted RBP22.36■■□□□ 1.17
LMNB1-202ENST00000395354 RXRAP19793 462 aa22.36■■□□□ 1.17
LMNB1-202ENST00000395354 IREB2P48200 963 aaKnown RBP22.36■■□□□ 1.17
LMNB1-202ENST00000395354 SSRP1Q08945 709 aaKnown RBP22.36■■□□□ 1.17
LMNB1-202ENST00000395354 FAM47AQ5JRC9 791 aa22.36■■□□□ 1.17
LMNB1-202ENST00000395354 L1TD1Q5T7N2 865 aaKnown RBP22.36■■□□□ 1.17
LMNB1-202ENST00000395354 MOB2Q70IA6 237 aa22.36■■□□□ 1.17
LMNB1-202ENST00000395354 ARMC9Q7Z3E5 817 aa22.36■■□□□ 1.17
LMNB1-202ENST00000395354 CATIPQ7Z7H3 387 aa22.36■■□□□ 1.17
LMNB1-202ENST00000395354 MYL10Q9BUA6 226 aa22.36■■□□□ 1.17
LMNB1-202ENST00000395354 GBA2Q9HCG7 927 aaPredicted RBP22.36■■□□□ 1.17
LMNB1-202ENST00000395354 GOLGA6L3A6NEY3 463 aa22.35■■□□□ 1.17
LMNB1-202ENST00000395354 CTNND1O60716 968 aaKnown RBP22.35■■□□□ 1.17
LMNB1-202ENST00000395354 GADD45BO75293 160 aaPredicted RBP22.35■■□□□ 1.17
LMNB1-202ENST00000395354 AKR1B1P15121 316 aa22.35■■□□□ 1.17
LMNB1-202ENST00000395354 INPP5BP32019 993 aa22.35■■□□□ 1.17
LMNB1-202ENST00000395354 CAP2P40123 477 aa22.35■■□□□ 1.17
LMNB1-202ENST00000395354 ZNF445P59923 1031 aa22.35■■□□□ 1.17
LMNB1-202ENST00000395354 MAP3K9P80192 1104 aa22.35■■□□□ 1.17
LMNB1-202ENST00000395354 TFAP4Q01664 338 aa22.35■■□□□ 1.17
LMNB1-202ENST00000395354 C2orf69Q8N8R5 385 aa22.35■■□□□ 1.17
LMNB1-202ENST00000395354 ANKS1AQ92625 1134 aa22.35■■□□□ 1.17
LMNB1-202ENST00000395354 TCP11L1Q9NUJ3 509 aa22.35■■□□□ 1.17
LMNB1-202ENST00000395354 RBM28Q9NW13 759 aaKnown RBP22.35■■□□□ 1.17
LMNB1-202ENST00000395354 MYH8P13535 1937 aa22.35■■□□□ 1.17
LMNB1-202ENST00000395354 TSPY2A6NKD2 308 aa22.34■■□□□ 1.17
LMNB1-202ENST00000395354 MPHOSPH10O00566 681 aaKnown RBP22.34■■□□□ 1.17
LMNB1-202ENST00000395354 GDF11O95390 407 aa22.34■■□□□ 1.17
LMNB1-202ENST00000395354 TSPY3P0CV98 308 aa22.34■■□□□ 1.17
LMNB1-202ENST00000395354 TSPY8P0CW00 308 aa22.34■■□□□ 1.17
LMNB1-202ENST00000395354 FKBP1BP68106 108 aa22.34■■□□□ 1.17
LMNB1-202ENST00000395354 MAP3K11Q16584 847 aa22.34■■□□□ 1.17
LMNB1-202ENST00000395354 ABCB5Q2M3G0 1257 aa22.34■■□□□ 1.17
LMNB1-202ENST00000395354 TRIM22Q8IYM9 498 aa22.34■■□□□ 1.17
LMNB1-202ENST00000395354 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.34■■□□□ 1.17
LMNB1-202ENST00000395354 ZKSCAN4Q969J2 545 aaPredicted RBP22.34■■□□□ 1.17
LMNB1-202ENST00000395354 ZNF396Q96N95 335 aaPredicted RBP22.34■■□□□ 1.17
LMNB1-202ENST00000395354 ALG1Q9BT22 464 aa22.34■■□□□ 1.17
LMNB1-202ENST00000395354 JAG1P78504 1218 aa22.33■■□□□ 1.17
LMNB1-202ENST00000395354 BRAPQ7Z569 592 aa22.33■■□□□ 1.17
LMNB1-202ENST00000395354 DGKHQ86XP1 1220 aa22.33■■□□□ 1.17
LMNB1-202ENST00000395354 CCDC144CPQ8IYA2 1237 aa22.33■■□□□ 1.17
LMNB1-202ENST00000395354 CABP5Q9NP86 173 aa22.33■■□□□ 1.17
LMNB1-202ENST00000395354 UBE2Q2LH0YL09 131 aa22.33■■□□□ 1.16
LMNB1-202ENST00000395354 SHROOM1Q2M3G4 852 aaPredicted RBP22.33■■□□□ 1.16
LMNB1-202ENST00000395354 ZSCAN23Q3MJ62 389 aa22.33■■□□□ 1.16
LMNB1-202ENST00000395354 FAM173BQ6P4H8 233 aa22.33■■□□□ 1.16
LMNB1-202ENST00000395354 NEDD1Q8NHV4 660 aa22.33■■□□□ 1.16
LMNB1-202ENST00000395354 SPATA32Q96LK8 384 aa22.33■■□□□ 1.16
LMNB1-202ENST00000395354 TRPM7Q96QT4 1865 aa22.32■■□□□ 1.16
LMNB1-202ENST00000395354 GH2P01242 217 aa22.32■■□□□ 1.16
LMNB1-202ENST00000395354 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.32■■□□□ 1.16
LMNB1-202ENST00000395354 ANKRD13AQ8IZ07 590 aa22.32■■□□□ 1.16
LMNB1-202ENST00000395354 NUP133Q8WUM0 1156 aa22.32■■□□□ 1.16
LMNB1-202ENST00000395354 LEO1Q8WVC0 666 aaPredicted RBP22.32■■□□□ 1.16
LMNB1-202ENST00000395354 PPFIA3O75145 1194 aa22.31■■□□□ 1.16
LMNB1-202ENST00000395354 FOSBP53539 338 aa22.31■■□□□ 1.16
LMNB1-202ENST00000395354 TROAPQ12815 778 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms