RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 TMEM232C9JQI7 657 aa11.78□□□□□ -0.52
HIF1A-203ENST00000394997 PPP2R5BQ15173 497 aa11.78□□□□□ -0.52
HIF1A-203ENST00000394997 PFKFB3Q16875 520 aaPredicted RBP11.78□□□□□ -0.52
HIF1A-203ENST00000394997 CDKAL1Q5VV42 579 aa11.78□□□□□ -0.52
HIF1A-203ENST00000394997 PALM3A6NDB9 673 aaPredicted RBP11.77□□□□□ -0.52
HIF1A-203ENST00000394997 TEX35Q5T0J7 233 aa11.77□□□□□ -0.52
HIF1A-203ENST00000394997 TAF3Q5VWG9 929 aa11.77□□□□□ -0.52
HIF1A-203ENST00000394997 GRAMD1CQ8IYS0 662 aa11.77□□□□□ -0.52
HIF1A-203ENST00000394997 FAM177A1Q8N128 213 aaPredicted RBP11.77□□□□□ -0.52
HIF1A-203ENST00000394997 STAG2Q8N3U4 1231 aa11.77□□□□□ -0.52
HIF1A-203ENST00000394997 AKT1S1Q96B36 256 aa11.77□□□□□ -0.52
HIF1A-203ENST00000394997 CHMP4CQ96CF2 233 aa11.77□□□□□ -0.52
HIF1A-203ENST00000394997 PHIPQ8WWQ0 1821 aa11.77□□□□□ -0.53
HIF1A-203ENST00000394997 RLFQ13129 1914 aa11.77□□□□□ -0.53
HIF1A-203ENST00000394997 GPR75-ASB3A0A0A6YYF3 556 aa11.77□□□□□ -0.53
HIF1A-203ENST00000394997 PPP1R3GB7ZBB8 358 aa11.77□□□□□ -0.53
HIF1A-203ENST00000394997 RASA1P20936 1047 aa11.77□□□□□ -0.53
HIF1A-203ENST00000394997 HIBADHP31937 336 aaKnown RBP11.77□□□□□ -0.53
HIF1A-203ENST00000394997 SPECC1Q5M775 1068 aa11.77□□□□□ -0.53
HIF1A-203ENST00000394997 DAGLBQ8NCG7 672 aa11.77□□□□□ -0.53
HIF1A-203ENST00000394997 CLIP2Q9UDT6 1046 aa11.77□□□□□ -0.53
HIF1A-203ENST00000394997 CCNL1Q9UK58 526 aaPredicted RBP11.77□□□□□ -0.53
HIF1A-203ENST00000394997 USP21Q9UK80 565 aa11.77□□□□□ -0.53
HIF1A-203ENST00000394997 MNS1Q8NEH6 495 aa11.77□□□□□ -0.53
HIF1A-203ENST00000394997 VPS54Q9P1Q0 977 aa11.77□□□□□ -0.53
HIF1A-203ENST00000394997 KCNH3Q9ULD8 1083 aa11.77□□□□□ -0.53
HIF1A-203ENST00000394997 TOM1O60784 492 aa11.76□□□□□ -0.53
HIF1A-203ENST00000394997 SNHG28P0DPA3 235 aa11.76□□□□□ -0.53
HIF1A-203ENST00000394997 TMTC2Q8N394 836 aa11.76□□□□□ -0.53
HIF1A-203ENST00000394997 CERS5Q8N5B7 392 aa11.76□□□□□ -0.53
HIF1A-203ENST00000394997 EPSTI1Q96J88 318 aa11.76□□□□□ -0.53
HIF1A-203ENST00000394997 LRP2BPQ9P2M1 347 aa11.76□□□□□ -0.53
HIF1A-203ENST00000394997 ADRA2BP18089 450 aa11.76□□□□□ -0.53
HIF1A-203ENST00000394997 GRM4Q14833 912 aa11.76□□□□□ -0.53
HIF1A-203ENST00000394997 KRI1Q8N9T8 703 aaKnown RBP11.76□□□□□ -0.53
HIF1A-203ENST00000394997 ANKRD2Q9GZV1 360 aa11.76□□□□□ -0.53
HIF1A-203ENST00000394997 ARPP21Q9UBL0 812 aaPredicted RBP11.76□□□□□ -0.53
HIF1A-203ENST00000394997 hCG_1642624A0A1W2PR95 340 aa11.75□□□□□ -0.53
HIF1A-203ENST00000394997 TDO2P48775 406 aa11.75□□□□□ -0.53
HIF1A-203ENST00000394997 RILPL1Q5EBL4 403 aa11.75□□□□□ -0.53
HIF1A-203ENST00000394997 REXO1L1PQ8IX06 675 aa11.75□□□□□ -0.53
HIF1A-203ENST00000394997 LRRN4CLQ8ND94 238 aa11.75□□□□□ -0.53
HIF1A-203ENST00000394997 IMPACTQ9P2X3 320 aa11.75□□□□□ -0.53
HIF1A-203ENST00000394997 LCTP09848 1927 aa11.75□□□□□ -0.53
HIF1A-203ENST00000394997 SYKP43405 635 aa11.75□□□□□ -0.53
HIF1A-203ENST00000394997 TRDNQ13061 729 aa11.75□□□□□ -0.53
HIF1A-203ENST00000394997 STK38Q15208 465 aa11.75□□□□□ -0.53
HIF1A-203ENST00000394997 FAM196AQ6ZSG2 479 aa11.75□□□□□ -0.53
HIF1A-203ENST00000394997 C16orf86Q6ZW13 317 aa11.75□□□□□ -0.53
HIF1A-203ENST00000394997 ESR2Q92731 530 aa11.75□□□□□ -0.53
HIF1A-203ENST00000394997 DYNLL2Q96FJ2 89 aa11.75□□□□□ -0.53
HIF1A-203ENST00000394997 SETDB2Q96T68 719 aa11.75□□□□□ -0.53
HIF1A-203ENST00000394997 RNF41Q9H4P4 317 aaPredicted RBP11.75□□□□□ -0.53
HIF1A-203ENST00000394997 LEMD3Q9Y2U8 911 aa11.75□□□□□ -0.53
HIF1A-203ENST00000394997 KLRC4O43908 158 aa11.75□□□□□ -0.53
HIF1A-203ENST00000394997 KINO60870 393 aaKnown RBP11.75□□□□□ -0.53
HIF1A-203ENST00000394997 APPP05067 770 aa11.75□□□□□ -0.53
HIF1A-203ENST00000394997 ZNF827Q17R98 1081 aa11.75□□□□□ -0.53
HIF1A-203ENST00000394997 FAM47AQ5JRC9 791 aa11.75□□□□□ -0.53
HIF1A-203ENST00000394997 VSTM4Q8IW00 320 aa11.75□□□□□ -0.53
HIF1A-203ENST00000394997 L2HGDHQ9H9P8 463 aa11.75□□□□□ -0.53
HIF1A-203ENST00000394997 NR1I3Q14994 352 aa11.74□□□□□ -0.53
HIF1A-203ENST00000394997 DIXDC1Q155Q3 683 aa11.74□□□□□ -0.53
HIF1A-203ENST00000394997 PTPN14Q15678 1187 aa11.74□□□□□ -0.53
HIF1A-203ENST00000394997 PPP1R1BQ9UD71 204 aaPredicted RBP11.74□□□□□ -0.53
HIF1A-203ENST00000394997 SERTAD1Q9UHV2 236 aa11.74□□□□□ -0.53
HIF1A-203ENST00000394997 STXBP3O00186 592 aa11.74□□□□□ -0.53
HIF1A-203ENST00000394997 NKRFO15226 690 aaKnown RBP eCLIP11.74□□□□□ -0.53
HIF1A-203ENST00000394997 ZSCAN20P17040 1043 aaPredicted RBP11.74□□□□□ -0.53
HIF1A-203ENST00000394997 NCBP1Q09161 790 aaKnown RBP11.74□□□□□ -0.53
HIF1A-203ENST00000394997 IRF2BP1Q8IU81 584 aa11.74□□□□□ -0.53
HIF1A-203ENST00000394997 CCDC69A6NI79 296 aa11.74□□□□□ -0.53
HIF1A-203ENST00000394997 SLC3A2P08195 630 aaKnown RBP11.74□□□□□ -0.53
HIF1A-203ENST00000394997 CCDC73Q6ZRK6 1079 aa11.74□□□□□ -0.53
HIF1A-203ENST00000394997 NLRP3Q96P20 1036 aa11.74□□□□□ -0.53
HIF1A-203ENST00000394997 AFF2P51816 1311 aa11.73□□□□□ -0.53
HIF1A-203ENST00000394997 CASP1P29466 404 aa11.73□□□□□ -0.53
HIF1A-203ENST00000394997 BICDL1Q6ZP65 573 aa11.73□□□□□ -0.53
HIF1A-203ENST00000394997 KRT222Q8N1A0 295 aa11.73□□□□□ -0.53
HIF1A-203ENST00000394997 TC2NQ8N9U0 490 aa11.73□□□□□ -0.53
HIF1A-203ENST00000394997 SLC44A5Q8NCS7 719 aa11.73□□□□□ -0.53
HIF1A-203ENST00000394997 RBM28Q9NW13 759 aaKnown RBP11.73□□□□□ -0.53
HIF1A-203ENST00000394997 NBPF5PQ86XG9 351 aaPredicted RBP11.73□□□□□ -0.53
HIF1A-203ENST00000394997 DGKHQ86XP1 1220 aa11.73□□□□□ -0.53
HIF1A-203ENST00000394997 PAGE5Q96GU1 130 aa11.73□□□□□ -0.53
HIF1A-203ENST00000394997 TRIM34Q9BYJ4 488 aa11.73□□□□□ -0.53
HIF1A-203ENST00000394997 CD209Q9NNX6 404 aa11.73□□□□□ -0.53
HIF1A-203ENST00000394997 RTCBQ9Y3I0 505 aaKnown RBP11.73□□□□□ -0.53
HIF1A-203ENST00000394997 A0A1B0GTH6 734 aa11.73□□□□□ -0.53
HIF1A-203ENST00000394997 RNF225M0QZC1 329 aaPredicted RBP11.73□□□□□ -0.53
HIF1A-203ENST00000394997 POSTNQ15063 836 aa11.73□□□□□ -0.53
HIF1A-203ENST00000394997 UTP14CQ5TAP6 766 aaKnown RBP11.73□□□□□ -0.53
HIF1A-203ENST00000394997 NACAP1Q9BZK3 213 aa11.73□□□□□ -0.53
HIF1A-203ENST00000394997 ABCF2Q9UG63 623 aa11.73□□□□□ -0.53
HIF1A-203ENST00000394997 PCDHA6Q9UN73 950 aa11.73□□□□□ -0.53
HIF1A-203ENST00000394997 PCDHA8Q9Y5H6 950 aa11.73□□□□□ -0.53
HIF1A-203ENST00000394997 LRRC10BA6NIK2 292 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 RASSF10A6NK89 507 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 CPLX1O14810 134 aa11.72□□□□□ -0.53
HIF1A-203ENST00000394997 NT5C2P49902 561 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms