RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 LRRC47Q8N1G4 583 aaKnown RBP11.51□□□□□ -0.57
COL4A6-203ENST00000394872 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.51□□□□□ -0.57
COL4A6-203ENST00000394872 PALM3A6NDB9 673 aaPredicted RBP11.51□□□□□ -0.57
COL4A6-203ENST00000394872 ATP5JP18859 108 aa11.51□□□□□ -0.57
COL4A6-203ENST00000394872 CASC4Q6P4E1 433 aa11.51□□□□□ -0.57
COL4A6-203ENST00000394872 FAM173BQ6P4H8 233 aa11.51□□□□□ -0.57
COL4A6-203ENST00000394872 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.51□□□□□ -0.57
COL4A6-203ENST00000394872 ZNF654Q8IZM8 581 aa11.51□□□□□ -0.57
COL4A6-203ENST00000394872 PSTPIP2Q9H939 334 aa11.51□□□□□ -0.57
COL4A6-203ENST00000394872 ASIC3Q9UHC3 531 aa11.51□□□□□ -0.57
COL4A6-203ENST00000394872 CIB2O75838 187 aa11.51□□□□□ -0.57
COL4A6-203ENST00000394872 BTDP43251 543 aa11.51□□□□□ -0.57
COL4A6-203ENST00000394872 BCAMP50895 628 aa11.51□□□□□ -0.57
COL4A6-203ENST00000394872 FYB2Q5VWT5 728 aa11.51□□□□□ -0.57
COL4A6-203ENST00000394872 ZBTB8OSQ8IWT0 167 aa11.51□□□□□ -0.57
COL4A6-203ENST00000394872 ZBTB38Q8NAP3 1195 aaPredicted RBP11.51□□□□□ -0.57
COL4A6-203ENST00000394872 CCDC110Q8TBZ0 833 aa11.51□□□□□ -0.57
COL4A6-203ENST00000394872 TRIM31Q9BZY9 425 aa11.51□□□□□ -0.57
COL4A6-203ENST00000394872 STIM2Q9P246 746 aa11.51□□□□□ -0.57
COL4A6-203ENST00000394872 KLHL30Q0D2K2 578 aa11.51□□□□□ -0.57
COL4A6-203ENST00000394872 PRR16Q569H4 304 aa11.51□□□□□ -0.57
COL4A6-203ENST00000394872 SFMBT2Q5VUG0 894 aa11.51□□□□□ -0.57
COL4A6-203ENST00000394872 FAM184BQ9ULE4 1060 aa11.51□□□□□ -0.57
COL4A6-203ENST00000394872 CFAP43Q8NDM7 1665 aa11.51□□□□□ -0.57
COL4A6-203ENST00000394872 EVCP57679 992 aa11.5□□□□□ -0.57
COL4A6-203ENST00000394872 ANKRD35Q8N283 1001 aa11.5□□□□□ -0.57
COL4A6-203ENST00000394872 STAMQ92783 540 aa11.5□□□□□ -0.57
COL4A6-203ENST00000394872 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.5□□□□□ -0.57
COL4A6-203ENST00000394872 LONRF3Q496Y0 759 aa11.5□□□□□ -0.57
COL4A6-203ENST00000394872 GPBP1Q86WP2 473 aa11.5□□□□□ -0.57
COL4A6-203ENST00000394872 AFAP1L2Q8N4X5 818 aa11.5□□□□□ -0.57
COL4A6-203ENST00000394872 SDR42E1Q8WUS8 393 aa11.5□□□□□ -0.57
COL4A6-203ENST00000394872 UNC13AQ9UPW8 1703 aa11.5□□□□□ -0.57
COL4A6-203ENST00000394872 HPDP32754 393 aaPredicted RBP11.5□□□□□ -0.57
COL4A6-203ENST00000394872 CYP2J2P51589 502 aa11.5□□□□□ -0.57
COL4A6-203ENST00000394872 CMTR1Q8N1G2 835 aaKnown RBP11.5□□□□□ -0.57
COL4A6-203ENST00000394872 KDRP35968 1356 aa11.5□□□□□ -0.57
COL4A6-203ENST00000394872 CFAP65Q6ZU64 1925 aaKnown RBP11.5□□□□□ -0.57
COL4A6-203ENST00000394872 ABL1P00519 1130 aa11.5□□□□□ -0.57
COL4A6-203ENST00000394872 ERCC6LQ2NKX8 1250 aa11.5□□□□□ -0.57
COL4A6-203ENST00000394872 MCF2L2Q86YR7 1114 aa11.5□□□□□ -0.57
COL4A6-203ENST00000394872 CNKSR1Q969H4 720 aa11.5□□□□□ -0.57
COL4A6-203ENST00000394872 FAM193BQ96PV7 902 aaPredicted RBP11.5□□□□□ -0.57
COL4A6-203ENST00000394872 QTRT2Q9H974 415 aaKnown RBP11.5□□□□□ -0.57
COL4A6-203ENST00000394872 JAK2O60674 1132 aa11.5□□□□□ -0.57
COL4A6-203ENST00000394872 FLOT1O75955 427 aa11.5□□□□□ -0.57
COL4A6-203ENST00000394872 LIG4P49917 911 aa11.5□□□□□ -0.57
COL4A6-203ENST00000394872 GTF2A1P52655 376 aaPredicted RBP11.5□□□□□ -0.57
COL4A6-203ENST00000394872 TTLL7Q6ZT98 887 aa11.5□□□□□ -0.57
COL4A6-203ENST00000394872 SYCE1Q8N0S2 351 aa11.5□□□□□ -0.57
COL4A6-203ENST00000394872 PCDHB13Q9Y5F0 798 aa11.5□□□□□ -0.57
COL4A6-203ENST00000394872 CEP104O60308 925 aa11.49□□□□□ -0.57
COL4A6-203ENST00000394872 CDC37L1Q7L3B6 337 aa11.49□□□□□ -0.57
COL4A6-203ENST00000394872 IFNL3Q8IZI9 196 aa11.49□□□□□ -0.57
COL4A6-203ENST00000394872 PLXNC1O60486 1568 aa11.49□□□□□ -0.57
COL4A6-203ENST00000394872 IWS1Q96ST2 819 aa11.49□□□□□ -0.57
COL4A6-203ENST00000394872 ST7Q9NRC1 585 aa11.49□□□□□ -0.57
COL4A6-203ENST00000394872 FAM170AA1A519 330 aa11.49□□□□□ -0.57
COL4A6-203ENST00000394872 PPEF1O14829 653 aaPredicted RBP11.49□□□□□ -0.57
COL4A6-203ENST00000394872 GNA14O95837 355 aa11.49□□□□□ -0.57
COL4A6-203ENST00000394872 CLCN1P35523 988 aa11.49□□□□□ -0.57
COL4A6-203ENST00000394872 TECP42680 631 aa11.49□□□□□ -0.57
COL4A6-203ENST00000394872 XKR9Q5GH70 373 aa11.49□□□□□ -0.57
COL4A6-203ENST00000394872 USPL1Q5W0Q7 1092 aa11.49□□□□□ -0.57
COL4A6-203ENST00000394872 FBXO11Q86XK2 927 aa11.49□□□□□ -0.57
COL4A6-203ENST00000394872 AFG3L2Q9Y4W6 797 aa11.49□□□□□ -0.57
COL4A6-203ENST00000394872 KCNQ3O43525 872 aa11.49□□□□□ -0.57
COL4A6-203ENST00000394872 CHRNDQ07001 517 aa11.49□□□□□ -0.57
COL4A6-203ENST00000394872 CCDC89Q8N998 374 aa11.49□□□□□ -0.57
COL4A6-203ENST00000394872 MAGEA1P43355 309 aa11.49□□□□□ -0.57
COL4A6-203ENST00000394872 ICA1Q05084 483 aa11.49□□□□□ -0.57
COL4A6-203ENST00000394872 MCTP2Q6DN12 878 aa11.49□□□□□ -0.57
COL4A6-203ENST00000394872 EDC3Q96F86 508 aaKnown RBP11.49□□□□□ -0.57
COL4A6-203ENST00000394872 LSM14BQ9BX40 385 aaKnown RBP11.49□□□□□ -0.57
COL4A6-203ENST00000394872 DNMT1P26358 1616 aaKnown RBP11.49□□□□□ -0.57
COL4A6-203ENST00000394872 TNNC2P02585 160 aa11.49□□□□□ -0.57
COL4A6-203ENST00000394872 SRGAP1Q7Z6B7 1085 aa11.49□□□□□ -0.57
COL4A6-203ENST00000394872 IFT20Q8IY31 132 aa11.49□□□□□ -0.57
COL4A6-203ENST00000394872 SLFN12Q8IYM2 578 aa11.49□□□□□ -0.57
COL4A6-203ENST00000394872 CUL4BQ13620 913 aa11.48□□□□□ -0.57
COL4A6-203ENST00000394872 CEP57Q86XR8 500 aa11.48□□□□□ -0.57
COL4A6-203ENST00000394872 BLIDQ8IZY5 108 aa11.48□□□□□ -0.57
COL4A6-203ENST00000394872 STMN2Q93045 179 aa11.48□□□□□ -0.57
COL4A6-203ENST00000394872 MMS19Q96T76 1030 aa11.48□□□□□ -0.57
COL4A6-203ENST00000394872 GIGYF1O75420 1035 aaPredicted RBP11.48□□□□□ -0.57
COL4A6-203ENST00000394872 TUBB2AQ13885 445 aa11.48□□□□□ -0.57
COL4A6-203ENST00000394872 HS1BP3Q53T59 392 aa11.48□□□□□ -0.57
COL4A6-203ENST00000394872 TAOK1Q7L7X3 1001 aa11.48□□□□□ -0.57
COL4A6-203ENST00000394872 ADPGKQ9BRR6 497 aa11.48□□□□□ -0.57
COL4A6-203ENST00000394872 TUBB2BQ9BVA1 445 aa11.48□□□□□ -0.57
COL4A6-203ENST00000394872 TMEM2Q9UHN6 1383 aa11.48□□□□□ -0.57
COL4A6-203ENST00000394872 KLHL7Q8IXQ5 586 aa11.48□□□□□ -0.57
COL4A6-203ENST00000394872 TEKT3Q9BXF9 490 aa11.48□□□□□ -0.57
COL4A6-203ENST00000394872 KDM2BQ8NHM5 1336 aa11.48□□□□□ -0.57
COL4A6-203ENST00000394872 K7ENM7 598 aa11.48□□□□□ -0.57
COL4A6-203ENST00000394872 PNOCQ13519 176 aa11.48□□□□□ -0.57
COL4A6-203ENST00000394872 SESTD1Q86VW0 696 aa11.48□□□□□ -0.57
COL4A6-203ENST00000394872 NBPF3Q9H094 633 aa11.48□□□□□ -0.57
COL4A6-203ENST00000394872 CBX8Q9HC52 389 aa11.48□□□□□ -0.57
COL4A6-203ENST00000394872 SERTAD1Q9UHV2 236 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms