RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 USP17L15C9J2P7 530 aa10.18□□□□□ -0.78
APLF-202ENST00000394342 USP17L13C9JLJ4 530 aa10.18□□□□□ -0.78
APLF-202ENST00000394342 USP17L11C9JVI0 530 aa10.18□□□□□ -0.78
APLF-202ENST00000394342 USP17L18D6R9N7 530 aa10.18□□□□□ -0.78
APLF-202ENST00000394342 USP17L22D6RA61 530 aa10.18□□□□□ -0.78
APLF-202ENST00000394342 USP17L17D6RBQ6 530 aa10.18□□□□□ -0.78
APLF-202ENST00000394342 USP17L19D6RCP7 530 aa10.18□□□□□ -0.78
APLF-202ENST00000394342 USP17L20D6RJB6 530 aa10.18□□□□□ -0.78
APLF-202ENST00000394342 NEFLP07196 543 aa10.18□□□□□ -0.78
APLF-202ENST00000394342 HSPD1P10809 573 aaKnown RBP10.18□□□□□ -0.78
APLF-202ENST00000394342 GSPT1P15170 499 aaKnown RBP10.18□□□□□ -0.78
APLF-202ENST00000394342 CAP1Q01518 475 aa10.18□□□□□ -0.78
APLF-202ENST00000394342 USP17L24Q0WX57 530 aa10.18□□□□□ -0.78
APLF-202ENST00000394342 FAM110CQ1W6H9 321 aa10.18□□□□□ -0.78
APLF-202ENST00000394342 VPS53Q5VIR6 699 aa10.18□□□□□ -0.78
APLF-202ENST00000394342 ZNF589Q86UQ0 364 aaPredicted RBP10.18□□□□□ -0.78
APLF-202ENST00000394342 ZNF444Q8N0Y2 327 aaPredicted RBP10.18□□□□□ -0.78
APLF-202ENST00000394342 SP7Q8TDD2 431 aaPredicted RBP10.18□□□□□ -0.78
APLF-202ENST00000394342 GTF3C2Q8WUA4 911 aaPredicted RBP10.18□□□□□ -0.78
APLF-202ENST00000394342 KANSL2Q9H9L4 492 aa10.18□□□□□ -0.78
APLF-202ENST00000394342 ANAPC4Q9UJX5 808 aa10.18□□□□□ -0.78
APLF-202ENST00000394342 PTPN22Q9Y2R2 807 aa10.18□□□□□ -0.78
APLF-202ENST00000394342 FRMPD3Q5JV73 1810 aa10.17□□□□□ -0.78
APLF-202ENST00000394342 ZNF236Q9UL36 1845 aa10.17□□□□□ -0.78
APLF-202ENST00000394342 A0A1W2PRG0 241 aa10.17□□□□□ -0.78
APLF-202ENST00000394342 CENPBP07199 599 aaPredicted RBP10.17□□□□□ -0.78
APLF-202ENST00000394342 VCAM1P19320 739 aa10.17□□□□□ -0.78
APLF-202ENST00000394342 PSMC4P43686 418 aa10.17□□□□□ -0.78
APLF-202ENST00000394342 PRMT2P55345 433 aa10.17□□□□□ -0.78
APLF-202ENST00000394342 HERVK_113P62684 666 aa10.17□□□□□ -0.78
APLF-202ENST00000394342 ZYXQ15942 572 aaKnown RBP10.17□□□□□ -0.78
APLF-202ENST00000394342 CWC27Q6UX04 472 aaKnown RBP10.17□□□□□ -0.78
APLF-202ENST00000394342 CATSPERGQ6ZRH7 1159 aa10.17□□□□□ -0.78
APLF-202ENST00000394342 STK11IPQ8N1F8 1099 aa10.17□□□□□ -0.78
APLF-202ENST00000394342 LPAR1Q92633 364 aa10.17□□□□□ -0.78
APLF-202ENST00000394342 HPS5Q9UPZ3 1129 aa10.17□□□□□ -0.78
APLF-202ENST00000394342 TMX2Q9Y320 296 aa10.17□□□□□ -0.78
APLF-202ENST00000394342 BAZ2BQ9UIF8 2168 aaKnown RBP10.16□□□□□ -0.78
APLF-202ENST00000394342 RAD50Q92878 1312 aa10.16□□□□□ -0.78
APLF-202ENST00000394342 IGKV6D-41A0A0C4DH26 115 aa10.16□□□□□ -0.78
APLF-202ENST00000394342 FMNL1O95466 1100 aaPredicted RBP10.16□□□□□ -0.78
APLF-202ENST00000394342 FGAP02671 866 aa10.16□□□□□ -0.78
APLF-202ENST00000394342 EEF2P13639 858 aaKnown RBP10.16□□□□□ -0.78
APLF-202ENST00000394342 HOXD10P28358 340 aa10.16□□□□□ -0.78
APLF-202ENST00000394342 CTGFP29279 349 aa10.16□□□□□ -0.78
APLF-202ENST00000394342 FCGRTP55899 365 aa10.16□□□□□ -0.78
APLF-202ENST00000394342 CLEC10AQ8IUN9 316 aa10.16□□□□□ -0.78
APLF-202ENST00000394342 SIAH1Q8IUQ4 282 aa10.16□□□□□ -0.78
APLF-202ENST00000394342 ANKRD13CQ8N6S4 541 aa10.16□□□□□ -0.78
APLF-202ENST00000394342 TRIM47Q96LD4 638 aa10.16□□□□□ -0.78
APLF-202ENST00000394342 P2RX7Q99572 595 aaKnown RBP10.16□□□□□ -0.78
APLF-202ENST00000394342 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.16□□□□□ -0.78
APLF-202ENST00000394342 ARHGAP39Q9C0H5 1083 aa10.16□□□□□ -0.78
APLF-202ENST00000394342 VCPKMTQ9H867 229 aa10.16□□□□□ -0.78
APLF-202ENST00000394342 GOPCQ9HD26 462 aa10.16□□□□□ -0.78
APLF-202ENST00000394342 MORF4L1Q9UBU8 362 aa10.16□□□□□ -0.78
APLF-202ENST00000394342 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.16□□□□□ -0.78
APLF-202ENST00000394342 CCDC85CA6NKD9 419 aa10.15□□□□□ -0.78
APLF-202ENST00000394342 WDR46O15213 610 aaKnown RBP10.15□□□□□ -0.78
APLF-202ENST00000394342 ORC4O43929 436 aa10.15□□□□□ -0.78
APLF-202ENST00000394342 PRDM1O75626 825 aa10.15□□□□□ -0.78
APLF-202ENST00000394342 FGRP09769 529 aa10.15□□□□□ -0.78
APLF-202ENST00000394342 TSPY3P0CV98 308 aa10.15□□□□□ -0.78
APLF-202ENST00000394342 TSPY8P0CW00 308 aa10.15□□□□□ -0.78
APLF-202ENST00000394342 PCP11498 1178 aaKnown RBP10.15□□□□□ -0.78
APLF-202ENST00000394342 ATP2B2Q01814 1243 aa10.15□□□□□ -0.78
APLF-202ENST00000394342 CTDSPL2Q05D32 466 aa10.15□□□□□ -0.78
APLF-202ENST00000394342 PPP4R3BQ5MIZ7 849 aa10.15□□□□□ -0.78
APLF-202ENST00000394342 LBX2Q6XYB7 198 aa10.15□□□□□ -0.78
APLF-202ENST00000394342 NEDD1Q8NHV4 660 aa10.15□□□□□ -0.78
APLF-202ENST00000394342 RUFY2Q8WXA3 655 aa10.15□□□□□ -0.78
APLF-202ENST00000394342 CCDC136Q96JN2 1154 aa10.15□□□□□ -0.78
APLF-202ENST00000394342 DSCC1Q9BVC3 393 aa10.15□□□□□ -0.78
APLF-202ENST00000394342 RPAP3Q9H6T3 665 aaPredicted RBP10.15□□□□□ -0.78
APLF-202ENST00000394342 NYAP2Q9P242 653 aa10.15□□□□□ -0.78
APLF-202ENST00000394342 SRRDQ9UH36 339 aa10.15□□□□□ -0.78
APLF-202ENST00000394342 SYNPO2Q9UMS6 1093 aa10.15□□□□□ -0.78
APLF-202ENST00000394342 DNAH12Q6ZR08 3092 aa10.15□□□□□ -0.79
APLF-202ENST00000394342 MYPNQ86TC9 1320 aa10.14□□□□□ -0.79
APLF-202ENST00000394342 TTLL1O95922 423 aa10.14□□□□□ -0.79
APLF-202ENST00000394342 CHMLP26374 656 aa10.14□□□□□ -0.79
APLF-202ENST00000394342 NT5C2P49902 561 aa10.14□□□□□ -0.79
APLF-202ENST00000394342 ERVK-9P63128 1117 aa10.14□□□□□ -0.79
APLF-202ENST00000394342 ERVK-24P63145 666 aa10.14□□□□□ -0.79
APLF-202ENST00000394342 TFAP4Q01664 338 aa10.14□□□□□ -0.79
APLF-202ENST00000394342 KIAA1755Q5JYT7 1200 aa10.14□□□□□ -0.79
APLF-202ENST00000394342 GPRC5AQ8NFJ5 357 aa10.14□□□□□ -0.79
APLF-202ENST00000394342 MKL1Q969V6 931 aa10.14□□□□□ -0.79
APLF-202ENST00000394342 CEP95Q96GE4 821 aa10.14□□□□□ -0.79
APLF-202ENST00000394342 TANGO6Q9C0B7 1094 aa10.14□□□□□ -0.79
APLF-202ENST00000394342 MTMR4Q9NYA4 1195 aa10.14□□□□□ -0.79
APLF-202ENST00000394342 RABGAP1Q9Y3P9 1069 aa10.14□□□□□ -0.79
APLF-202ENST00000394342 PTCH2Q9Y6C5 1203 aa10.14□□□□□ -0.79
APLF-202ENST00000394342 TSPY2A6NKD2 308 aa10.13□□□□□ -0.79
APLF-202ENST00000394342 SPDYE16A6NNV3 312 aaPredicted RBP10.13□□□□□ -0.79
APLF-202ENST00000394342 TNPO2O14787 897 aaKnown RBP10.13□□□□□ -0.79
APLF-202ENST00000394342 COG2Q14746 738 aa10.13□□□□□ -0.79
APLF-202ENST00000394342 FAM47AQ5JRC9 791 aa10.13□□□□□ -0.79
APLF-202ENST00000394342 ERICH6BQ5W0A0 696 aa10.13□□□□□ -0.79
APLF-202ENST00000394342 NBPF11Q86T75 865 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms