RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 LONRF3Q496Y0 759 aa8.22□□□□□ -1.09
SMAD1-202ENST00000394092 SLC27A3Q5K4L6 730 aa8.22□□□□□ -1.09
SMAD1-202ENST00000394092 NT5DC1Q5TFE4 455 aa8.22□□□□□ -1.09
SMAD1-202ENST00000394092 PTF1AQ7RTS3 328 aa8.22□□□□□ -1.09
SMAD1-202ENST00000394092 TMC4Q7Z404 712 aa8.22□□□□□ -1.09
SMAD1-202ENST00000394092 FILIP1Q7Z7B0 1213 aa8.22□□□□□ -1.09
SMAD1-202ENST00000394092 CMTR1Q8N1G2 835 aaKnown RBP8.22□□□□□ -1.09
SMAD1-202ENST00000394092 MLKLQ8NB16 471 aa8.22□□□□□ -1.09
SMAD1-202ENST00000394092 CCDC148Q8NFR7 591 aa8.22□□□□□ -1.09
SMAD1-202ENST00000394092 RBM17Q96I25 401 aaKnown RBP8.22□□□□□ -1.09
SMAD1-202ENST00000394092 XPO4Q9C0E2 1151 aaKnown RBP8.22□□□□□ -1.09
SMAD1-202ENST00000394092 SH3GLB2Q9NR46 395 aa8.22□□□□□ -1.09
SMAD1-202ENST00000394092 KCND1Q9NSA2 647 aa8.22□□□□□ -1.09
SMAD1-202ENST00000394092 IFNKQ9P0W0 207 aa8.22□□□□□ -1.09
SMAD1-202ENST00000394092 TRPC5Q9UL62 973 aaPredicted RBP8.22□□□□□ -1.09
SMAD1-202ENST00000394092 PCDHB6Q9Y5E3 794 aa8.22□□□□□ -1.09
SMAD1-202ENST00000394092 V9GY48 417 aaPredicted RBP8.22□□□□□ -1.09
SMAD1-202ENST00000394092 A0A087WWV3 80 aa8.21□□□□□ -1.09
SMAD1-202ENST00000394092 WTIPA6NIX2 430 aaPredicted RBP8.21□□□□□ -1.09
SMAD1-202ENST00000394092 POLR2DO15514 142 aaKnown RBP8.21□□□□□ -1.09
SMAD1-202ENST00000394092 ONECUT3O60422 494 aaPredicted RBP8.21□□□□□ -1.09
SMAD1-202ENST00000394092 SERPINC1P01008 464 aa8.21□□□□□ -1.09
SMAD1-202ENST00000394092 SKILP12757 684 aa8.21□□□□□ -1.09
SMAD1-202ENST00000394092 NLRP5P59047 1200 aa8.21□□□□□ -1.09
SMAD1-202ENST00000394092 FANCCQ00597 558 aa8.21□□□□□ -1.09
SMAD1-202ENST00000394092 NCAPHQ15003 741 aa8.21□□□□□ -1.09
SMAD1-202ENST00000394092 PFKFB3Q16875 520 aaPredicted RBP8.21□□□□□ -1.09
SMAD1-202ENST00000394092 CRY2Q49AN0 593 aa8.21□□□□□ -1.09
SMAD1-202ENST00000394092 TTC38Q5R3I4 469 aa8.21□□□□□ -1.09
SMAD1-202ENST00000394092 C12orf60Q5U649 245 aa8.21□□□□□ -1.09
SMAD1-202ENST00000394092 PRR5LQ6MZQ0 368 aa8.21□□□□□ -1.09
SMAD1-202ENST00000394092 TMC6Q7Z403 805 aa8.21□□□□□ -1.09
SMAD1-202ENST00000394092 CCDC112Q8NEF3 446 aa8.21□□□□□ -1.09
SMAD1-202ENST00000394092 OXER1Q8TDS5 423 aa8.21□□□□□ -1.09
SMAD1-202ENST00000394092 TBC1D22AQ8WUA7 517 aa8.21□□□□□ -1.09
SMAD1-202ENST00000394092 ANKS1AQ92625 1134 aa8.21□□□□□ -1.09
SMAD1-202ENST00000394092 MKNK2Q9HBH9 465 aa8.21□□□□□ -1.09
SMAD1-202ENST00000394092 TCP11L1Q9NUJ3 509 aa8.21□□□□□ -1.09
SMAD1-202ENST00000394092 GGA1Q9UJY5 639 aa8.21□□□□□ -1.09
SMAD1-202ENST00000394092 PAXBP1Q9Y5B6 917 aa8.21□□□□□ -1.09
SMAD1-202ENST00000394092 PCDHA5Q9Y5H7 936 aa8.21□□□□□ -1.09
SMAD1-202ENST00000394092 AFF2P51816 1311 aa8.21□□□□□ -1.09
SMAD1-202ENST00000394092 LTBP1Q14766 1721 aa8.21□□□□□ -1.1
SMAD1-202ENST00000394092 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.21□□□□□ -1.1
SMAD1-202ENST00000394092 UFL1O94874 794 aa8.21□□□□□ -1.1
SMAD1-202ENST00000394092 TUBB4AP04350 444 aa8.21□□□□□ -1.1
SMAD1-202ENST00000394092 TSPY3P0CV98 308 aa8.21□□□□□ -1.1
SMAD1-202ENST00000394092 TSPY8P0CW00 308 aa8.21□□□□□ -1.1
SMAD1-202ENST00000394092 GALNT17Q6IS24 598 aa8.21□□□□□ -1.1
SMAD1-202ENST00000394092 SMIM5Q71RC9 77 aa8.21□□□□□ -1.1
SMAD1-202ENST00000394092 TXNRD3Q86VQ6 643 aa8.21□□□□□ -1.1
SMAD1-202ENST00000394092 CCDC24Q8N4L8 307 aa8.21□□□□□ -1.1
SMAD1-202ENST00000394092 SRBD1Q8N5C6 995 aaKnown RBP8.21□□□□□ -1.1
SMAD1-202ENST00000394092 PNMA1Q8ND90 353 aa8.21□□□□□ -1.1
SMAD1-202ENST00000394092 MS4A3Q96HJ5 214 aa8.21□□□□□ -1.1
SMAD1-202ENST00000394092 LZTS2Q9BRK4 669 aa8.21□□□□□ -1.1
SMAD1-202ENST00000394092 CSRNP2Q9H175 543 aa8.21□□□□□ -1.1
SMAD1-202ENST00000394092 PDCL3Q9H2J4 239 aa8.21□□□□□ -1.1
SMAD1-202ENST00000394092 SERTAD1Q9UHV2 236 aa8.21□□□□□ -1.1
SMAD1-202ENST00000394092 QSER1Q2KHR3 1735 aa8.2□□□□□ -1.1
SMAD1-202ENST00000394092 BAZ2BQ9UIF8 2168 aaKnown RBP8.2□□□□□ -1.1
SMAD1-202ENST00000394092 ACTN4O43707 911 aaKnown RBP8.2□□□□□ -1.1
SMAD1-202ENST00000394092 BBOX1O75936 387 aa8.2□□□□□ -1.1
SMAD1-202ENST00000394092 CYP2D6P10635 497 aa8.2□□□□□ -1.1
SMAD1-202ENST00000394092 TNNT1P13805 278 aa8.2□□□□□ -1.1
SMAD1-202ENST00000394092 ATP2B1P20020 1258 aa8.2□□□□□ -1.1
SMAD1-202ENST00000394092 ERCC5P28715 1186 aaPredicted RBP8.2□□□□□ -1.1
SMAD1-202ENST00000394092 LMOD1P29536 600 aaPredicted RBP8.2□□□□□ -1.1
SMAD1-202ENST00000394092 TXLNAP40222 546 aa8.2□□□□□ -1.1
SMAD1-202ENST00000394092 UBASH3AP57075 661 aa8.2□□□□□ -1.1
SMAD1-202ENST00000394092 CCZ1BP86790 482 aa8.2□□□□□ -1.1
SMAD1-202ENST00000394092 CCZ1P86791 482 aaPredicted RBP8.2□□□□□ -1.1
SMAD1-202ENST00000394092 ATP2C1P98194 919 aaPredicted RBP8.2□□□□□ -1.1
SMAD1-202ENST00000394092 MDM2Q00987 491 aaPredicted RBP8.2□□□□□ -1.1
SMAD1-202ENST00000394092 TFAP4Q01664 338 aa8.2□□□□□ -1.1
SMAD1-202ENST00000394092 GRM4Q14833 912 aa8.2□□□□□ -1.1
SMAD1-202ENST00000394092 CFAP100Q494V2 611 aa8.2□□□□□ -1.1
SMAD1-202ENST00000394092 FAM47AQ5JRC9 791 aa8.2□□□□□ -1.1
SMAD1-202ENST00000394092 ARL6IP4Q66PJ3 421 aaKnown RBP8.2□□□□□ -1.1
SMAD1-202ENST00000394092 AMIGO3Q86WK7 504 aa8.2□□□□□ -1.1
SMAD1-202ENST00000394092 ZNF444Q8N0Y2 327 aaPredicted RBP8.2□□□□□ -1.1
SMAD1-202ENST00000394092 CCDC12Q8WUD4 166 aaPredicted RBP8.2□□□□□ -1.1
SMAD1-202ENST00000394092 TNFRSF25Q93038 417 aa8.2□□□□□ -1.1
SMAD1-202ENST00000394092 C16orf45Q96MC5 204 aaPredicted RBP8.2□□□□□ -1.1
SMAD1-202ENST00000394092 PODXL2Q9NZ53 605 aa8.2□□□□□ -1.1
SMAD1-202ENST00000394092 MKRN1Q9UHC7 482 aaKnown RBP8.2□□□□□ -1.1
SMAD1-202ENST00000394092 MAN1B1Q9UKM7 699 aa8.2□□□□□ -1.1
SMAD1-202ENST00000394092 BRWD3Q6RI45 1802 aa8.19□□□□□ -1.1
SMAD1-202ENST00000394092 PSDA5PKW4 1024 aaPredicted RBP8.19□□□□□ -1.1
SMAD1-202ENST00000394092 SMIM22K7EJ46 135 aa8.19□□□□□ -1.1
SMAD1-202ENST00000394092 SERPINB2P05120 415 aa8.19□□□□□ -1.1
SMAD1-202ENST00000394092 USP17L8P0C7I0 530 aa8.19□□□□□ -1.1
SMAD1-202ENST00000394092 SLFN14P0C7P3 912 aa8.19□□□□□ -1.1
SMAD1-202ENST00000394092 GYS1P13807 737 aa8.19□□□□□ -1.1
SMAD1-202ENST00000394092 IL1R1P14778 569 aa8.19□□□□□ -1.1
SMAD1-202ENST00000394092 SARSP49591 514 aaKnown RBP8.19□□□□□ -1.1
SMAD1-202ENST00000394092 PLCD1P51178 756 aa8.19□□□□□ -1.1
SMAD1-202ENST00000394092 MORC3Q14149 939 aa8.19□□□□□ -1.1
SMAD1-202ENST00000394092 SYCP1Q15431 976 aa8.19□□□□□ -1.1
SMAD1-202ENST00000394092 PTPN14Q15678 1187 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms