RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 RRAGDQ9NQL2 400 aaPredicted RBP6.84□□□□□ -1.31
NPM1-203ENST00000393820 CNTN3Q9P232 1028 aa6.84□□□□□ -1.31
NPM1-203ENST00000393820 PRR12Q9ULL5 1215 aa6.84□□□□□ -1.31
NPM1-203ENST00000393820 TTC21BQ7Z4L5 1316 aa6.84□□□□□ -1.31
NPM1-203ENST00000393820 NUP188Q5SRE5 1749 aa6.84□□□□□ -1.31
NPM1-203ENST00000393820 CPSF1Q10570 1443 aaKnown RBP6.84□□□□□ -1.31
NPM1-203ENST00000393820 QRICH2Q9H0J4 1663 aa6.83□□□□□ -1.32
NPM1-203ENST00000393820 PEAK1Q9H792 1746 aa6.83□□□□□ -1.32
NPM1-203ENST00000393820 NFKB1P19838 968 aa6.83□□□□□ -1.32
NPM1-203ENST00000393820 AMPD1P23109 780 aa6.83□□□□□ -1.32
NPM1-203ENST00000393820 DDIT3P35638 169 aa6.83□□□□□ -1.32
NPM1-203ENST00000393820 CCINQ13939 588 aa6.83□□□□□ -1.32
NPM1-203ENST00000393820 GLIPR1L2Q4G1C9 344 aa6.83□□□□□ -1.32
NPM1-203ENST00000393820 C1orf229Q6ZS94 237 aaPredicted RBP6.83□□□□□ -1.32
NPM1-203ENST00000393820 SYT9Q86SS6 491 aa6.83□□□□□ -1.32
NPM1-203ENST00000393820 KIAA0825Q8IV33 1275 aa6.83□□□□□ -1.32
NPM1-203ENST00000393820 HSCBQ8IWL3 235 aa6.83□□□□□ -1.32
NPM1-203ENST00000393820 GOLGA6L1Q8N7Z2 621 aa6.83□□□□□ -1.32
NPM1-203ENST00000393820 SPON2Q9BUD6 331 aa6.83□□□□□ -1.32
NPM1-203ENST00000393820 RSRP1Q9BUV0 290 aa6.83□□□□□ -1.32
NPM1-203ENST00000393820 ABI2Q9NYB9 513 aaPredicted RBP6.83□□□□□ -1.32
NPM1-203ENST00000393820 NOP53Q9NZM5 478 aaKnown RBP6.83□□□□□ -1.32
NPM1-203ENST00000393820 ADAMTS1Q9UHI8 967 aa6.83□□□□□ -1.32
NPM1-203ENST00000393820 TTF2Q9UNY4 1162 aaKnown RBP6.83□□□□□ -1.32
NPM1-203ENST00000393820 KIF16BQ96L93 1317 aa6.83□□□□□ -1.32
NPM1-203ENST00000393820 NSD3Q9BZ95 1437 aa6.83□□□□□ -1.32
NPM1-203ENST00000393820 KRTAP4-8A0A0G2JLE6 195 aa6.82□□□□□ -1.32
NPM1-203ENST00000393820 EGFRP00533 1210 aa6.82□□□□□ -1.32
NPM1-203ENST00000393820 YY1P25490 414 aa6.82□□□□□ -1.32
NPM1-203ENST00000393820 CHRNA4P43681 627 aa6.82□□□□□ -1.32
NPM1-203ENST00000393820 TCEAL1Q15170 157 aa6.82□□□□□ -1.32
NPM1-203ENST00000393820 ALDH1L2Q3SY69 923 aa6.82□□□□□ -1.32
NPM1-203ENST00000393820 ATF7IPQ6VMQ6 1270 aa6.82□□□□□ -1.32
NPM1-203ENST00000393820 CKAP2LQ8IYA6 745 aa6.82□□□□□ -1.32
NPM1-203ENST00000393820 MARCH10Q8NA82 808 aaPredicted RBP6.82□□□□□ -1.32
NPM1-203ENST00000393820 SLC12A5Q9H2X9 1139 aa6.82□□□□□ -1.32
NPM1-203ENST00000393820 ZNF408Q9H9D4 720 aa6.82□□□□□ -1.32
NPM1-203ENST00000393820 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.82□□□□□ -1.32
NPM1-203ENST00000393820 UTRNP46939 3433 aa6.82□□□□□ -1.32
NPM1-203ENST00000393820 TBC1D8BQ0IIM8 1120 aa6.82□□□□□ -1.32
NPM1-203ENST00000393820 NFE2L2Q16236 605 aa6.82□□□□□ -1.32
NPM1-203ENST00000393820 GBP4Q96PP9 640 aa6.82□□□□□ -1.32
NPM1-203ENST00000393820 PNMA5Q96PV4 448 aa6.82□□□□□ -1.32
NPM1-203ENST00000393820 GRPEL1Q9HAV7 217 aa6.82□□□□□ -1.32
NPM1-203ENST00000393820 ZBTB40Q9NUA8 1239 aa6.82□□□□□ -1.32
NPM1-203ENST00000393820 STK32BQ9NY57 414 aa6.82□□□□□ -1.32
NPM1-203ENST00000393820 RRP7AQ9Y3A4 280 aaKnown RBP6.82□□□□□ -1.32
NPM1-203ENST00000393820 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.82□□□□□ -1.32
NPM1-203ENST00000393820 MRPL42Q9Y6G3 142 aaKnown RBP6.82□□□□□ -1.32
NPM1-203ENST00000393820 COL18A1P39060 1754 aa6.82□□□□□ -1.32
NPM1-203ENST00000393820 PIK3C2AO00443 1686 aa6.81□□□□□ -1.32
NPM1-203ENST00000393820 LRRC37A3O60309 1634 aa6.81□□□□□ -1.32
NPM1-203ENST00000393820 ANKRD36BQ8N2N9 1353 aa6.81□□□□□ -1.32
NPM1-203ENST00000393820 NEURL1BA8MQ27 555 aa6.81□□□□□ -1.32
NPM1-203ENST00000393820 RRP9O43818 475 aaKnown RBP6.81□□□□□ -1.32
NPM1-203ENST00000393820 U2AF1L5P0DN76 240 aaPredicted RBP6.81□□□□□ -1.32
NPM1-203ENST00000393820 RARAP10276 462 aa6.81□□□□□ -1.32
NPM1-203ENST00000393820 U2AF1Q01081 240 aaKnown RBP eCLIP6.81□□□□□ -1.32
NPM1-203ENST00000393820 NUCB1Q02818 461 aa6.81□□□□□ -1.32
NPM1-203ENST00000393820 SLC15A2Q16348 729 aa6.81□□□□□ -1.32
NPM1-203ENST00000393820 TXNRD1Q16881 649 aa6.81□□□□□ -1.32
NPM1-203ENST00000393820 KIAA0319Q5VV43 1072 aa6.81□□□□□ -1.32
NPM1-203ENST00000393820 PRPF40BQ6NWY9 871 aaKnown RBP6.81□□□□□ -1.32
NPM1-203ENST00000393820 CLEC17AQ6ZS10 378 aa6.81□□□□□ -1.32
NPM1-203ENST00000393820 SPACA7Q96KW9 195 aa6.81□□□□□ -1.32
NPM1-203ENST00000393820 PLEKHF1Q96S99 279 aa6.81□□□□□ -1.32
NPM1-203ENST00000393820 TRIM56Q9BRZ2 755 aaKnown RBP6.81□□□□□ -1.32
NPM1-203ENST00000393820 MTFR1LQ9H019 292 aa6.81□□□□□ -1.32
NPM1-203ENST00000393820 ZFP64Q9NPA5 681 aa6.81□□□□□ -1.32
NPM1-203ENST00000393820 LATS2Q9NRM7 1088 aa6.81□□□□□ -1.32
NPM1-203ENST00000393820 TERF2IPQ9NYB0 399 aa6.81□□□□□ -1.32
NPM1-203ENST00000393820 GGA1Q9UJY5 639 aa6.81□□□□□ -1.32
NPM1-203ENST00000393820 SBF2Q86WG5 1849 aa6.8□□□□□ -1.32
NPM1-203ENST00000393820 F6X3S4 739 aa6.8□□□□□ -1.32
NPM1-203ENST00000393820 MMP20O60882 483 aa6.8□□□□□ -1.32
NPM1-203ENST00000393820 TRIM27P14373 513 aa6.8□□□□□ -1.32
NPM1-203ENST00000393820 HOXB4P17483 251 aaPredicted RBP6.8□□□□□ -1.32
NPM1-203ENST00000393820 TMPOP42166 694 aaKnown RBP6.8□□□□□ -1.32
NPM1-203ENST00000393820 NASPP49321 788 aaPredicted RBP6.8□□□□□ -1.32
NPM1-203ENST00000393820 PWP1Q13610 501 aa6.8□□□□□ -1.32
NPM1-203ENST00000393820 CCDC85BQ15834 202 aaPredicted RBP6.8□□□□□ -1.32
NPM1-203ENST00000393820 BMP2KLQ5H9B9 411 aa6.8□□□□□ -1.32
NPM1-203ENST00000393820 ZNF468Q5VIY5 522 aaPredicted RBP6.8□□□□□ -1.32
NPM1-203ENST00000393820 PEAR1Q5VY43 1037 aaPredicted RBP6.8□□□□□ -1.32
NPM1-203ENST00000393820 HDGFL2Q7Z4V5 671 aaPredicted RBP6.8□□□□□ -1.32
NPM1-203ENST00000393820 ANKRD24Q8TF21 1146 aa6.8□□□□□ -1.32
NPM1-203ENST00000393820 ARHGAP45Q92619 1136 aa6.8□□□□□ -1.32
NPM1-203ENST00000393820 GCC1Q96CN9 775 aa6.8□□□□□ -1.32
NPM1-203ENST00000393820 GPATCH3Q96I76 525 aa6.8□□□□□ -1.32
NPM1-203ENST00000393820 TMEM74Q96NL1 305 aa6.8□□□□□ -1.32
NPM1-203ENST00000393820 SMC4Q9NTJ3 1288 aa6.8□□□□□ -1.32
NPM1-203ENST00000393820 PPM1HQ9ULR3 514 aa6.8□□□□□ -1.32
NPM1-203ENST00000393820 TNNQ9UQP3 1299 aa6.8□□□□□ -1.32
NPM1-203ENST00000393820 NFAT5O94916 1531 aa6.8□□□□□ -1.32
NPM1-203ENST00000393820 TNS2Q63HR2 1409 aa6.79□□□□□ -1.32
NPM1-203ENST00000393820 MAP3K5Q99683 1374 aa6.79□□□□□ -1.32
NPM1-203ENST00000393820 A0A1W2PP55 124 aa6.79□□□□□ -1.32
NPM1-203ENST00000393820 CYP2E1P05181 493 aaPredicted RBP6.79□□□□□ -1.32
NPM1-203ENST00000393820 SSBP05455 408 aaKnown RBP eCLIP6.79□□□□□ -1.32
NPM1-203ENST00000393820 XRCC5P13010 732 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms