RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 PPFIA1Q13136 1202 aa12.73□□□□□ -0.37
LAMB1-203ENST00000393560 TCERG1LQ5VWI1 586 aa12.73□□□□□ -0.37
LAMB1-203ENST00000393560 CEP295NLQ96MC4 621 aa12.73□□□□□ -0.37
LAMB1-203ENST00000393560 NR1H4Q96RI1 486 aaPredicted RBP12.73□□□□□ -0.37
LAMB1-203ENST00000393560 TNMDQ9H2S6 317 aa12.73□□□□□ -0.37
LAMB1-203ENST00000393560 DNAJC5Q9H3Z4 198 aa12.73□□□□□ -0.37
LAMB1-203ENST00000393560 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.73□□□□□ -0.37
LAMB1-203ENST00000393560 IFIT2P09913 472 aaKnown RBP12.73□□□□□ -0.37
LAMB1-203ENST00000393560 RHOXF2BP0C7M4 288 aa12.73□□□□□ -0.37
LAMB1-203ENST00000393560 IL4RP24394 825 aa12.73□□□□□ -0.37
LAMB1-203ENST00000393560 ALDH3A1P30838 453 aa12.73□□□□□ -0.37
LAMB1-203ENST00000393560 VSNL1P62760 191 aa12.73□□□□□ -0.37
LAMB1-203ENST00000393560 IMMTQ16891 758 aaKnown RBP12.73□□□□□ -0.37
LAMB1-203ENST00000393560 HVCN1Q96D96 273 aa12.73□□□□□ -0.37
LAMB1-203ENST00000393560 RHOXF2Q9BQY4 288 aa12.73□□□□□ -0.37
LAMB1-203ENST00000393560 SEL1LQ9UBV2 794 aa12.73□□□□□ -0.37
LAMB1-203ENST00000393560 MSH6P52701 1360 aa12.73□□□□□ -0.37
LAMB1-203ENST00000393560 RIMS1Q86UR5 1692 aaKnown RBP12.73□□□□□ -0.37
LAMB1-203ENST00000393560 hCG_2014768A0A024R1R8 64 aa12.72□□□□□ -0.37
LAMB1-203ENST00000393560 LRRD1A4D1F6 860 aa12.72□□□□□ -0.37
LAMB1-203ENST00000393560 PALM3A6NDB9 673 aaPredicted RBP12.72□□□□□ -0.37
LAMB1-203ENST00000393560 AKR1B10O60218 316 aa12.72□□□□□ -0.37
LAMB1-203ENST00000393560 CHMP4BP1P59074 171 aa12.72□□□□□ -0.37
LAMB1-203ENST00000393560 YTHDF3Q7Z739 585 aaKnown RBP12.72□□□□□ -0.37
LAMB1-203ENST00000393560 MYO1HQ8N1T3 1032 aa12.72□□□□□ -0.37
LAMB1-203ENST00000393560 NGDNQ8NEJ9 315 aaKnown RBP12.72□□□□□ -0.37
LAMB1-203ENST00000393560 SRPK1Q96SB4 655 aaKnown RBP12.72□□□□□ -0.37
LAMB1-203ENST00000393560 ABCF3Q9NUQ8 709 aa12.72□□□□□ -0.37
LAMB1-203ENST00000393560 EXOC1Q9NV70 894 aa12.72□□□□□ -0.37
LAMB1-203ENST00000393560 RAB21Q9UL25 225 aa12.72□□□□□ -0.37
LAMB1-203ENST00000393560 MED14O60244 1454 aa12.72□□□□□ -0.37
LAMB1-203ENST00000393560 ARHGAP23Q9P227 1491 aa12.72□□□□□ -0.37
LAMB1-203ENST00000393560 TRIM43BA6NCK2 446 aa12.72□□□□□ -0.37
LAMB1-203ENST00000393560 IFFO1Q0D2I5 559 aa12.72□□□□□ -0.37
LAMB1-203ENST00000393560 TMCO4Q5TGY1 634 aa12.72□□□□□ -0.37
LAMB1-203ENST00000393560 GINM1Q9NU53 330 aa12.72□□□□□ -0.37
LAMB1-203ENST00000393560 TIMM22Q9Y584 194 aa12.72□□□□□ -0.37
LAMB1-203ENST00000393560 TTC21BQ7Z4L5 1316 aa12.72□□□□□ -0.37
LAMB1-203ENST00000393560 COL3A1P02461 1466 aaPredicted RBP12.71□□□□□ -0.37
LAMB1-203ENST00000393560 ATP9BO43861 1147 aa12.71□□□□□ -0.37
LAMB1-203ENST00000393560 ATP6V1G2O95670 118 aa12.71□□□□□ -0.37
LAMB1-203ENST00000393560 ATL3Q6DD88 541 aa12.71□□□□□ -0.37
LAMB1-203ENST00000393560 GBP7Q8N8V2 638 aaPredicted RBP12.71□□□□□ -0.37
LAMB1-203ENST00000393560 ANKK1Q8NFD2 765 aa12.71□□□□□ -0.37
LAMB1-203ENST00000393560 DHX58Q96C10 678 aa12.71□□□□□ -0.37
LAMB1-203ENST00000393560 SH3GL1Q99961 368 aa12.71□□□□□ -0.37
LAMB1-203ENST00000393560 SEZ6LQ9BYH1 1024 aa12.71□□□□□ -0.37
LAMB1-203ENST00000393560 LRRCC1Q9C099 1032 aa12.71□□□□□ -0.37
LAMB1-203ENST00000393560 AASDHPPTQ9NRN7 309 aa12.71□□□□□ -0.37
LAMB1-203ENST00000393560 DIS3Q9Y2L1 958 aaKnown RBP12.71□□□□□ -0.37
LAMB1-203ENST00000393560 SLIT1O75093 1534 aa12.71□□□□□ -0.37
LAMB1-203ENST00000393560 DIAPH2O60879 1101 aa12.71□□□□□ -0.37
LAMB1-203ENST00000393560 GSPT1P15170 499 aaKnown RBP12.71□□□□□ -0.37
LAMB1-203ENST00000393560 GNG11P61952 73 aa12.71□□□□□ -0.37
LAMB1-203ENST00000393560 PLOD1Q02809 727 aaPredicted RBP12.71□□□□□ -0.37
LAMB1-203ENST00000393560 ME3Q16798 604 aa12.71□□□□□ -0.37
LAMB1-203ENST00000393560 RC3H1Q5TC82 1133 aaKnown RBP12.71□□□□□ -0.37
LAMB1-203ENST00000393560 ANKLE2Q86XL3 938 aa12.71□□□□□ -0.37
LAMB1-203ENST00000393560 C8orf58Q8NAV2 365 aa12.71□□□□□ -0.37
LAMB1-203ENST00000393560 ANKRD24Q8TF21 1146 aa12.71□□□□□ -0.37
LAMB1-203ENST00000393560 WDR24Q96S15 920 aa12.71□□□□□ -0.37
LAMB1-203ENST00000393560 MPHOSPH6Q99547 160 aaKnown RBP12.71□□□□□ -0.37
LAMB1-203ENST00000393560 NDNQ99608 321 aa12.71□□□□□ -0.37
LAMB1-203ENST00000393560 MYL6BP14649 208 aa12.7□□□□□ -0.38
LAMB1-203ENST00000393560 SFPQP23246 707 aaKnown RBP eCLIP12.7□□□□□ -0.38
LAMB1-203ENST00000393560 YY1P25490 414 aa12.7□□□□□ -0.38
LAMB1-203ENST00000393560 CUL4AQ13619 759 aa12.7□□□□□ -0.38
LAMB1-203ENST00000393560 SLMAPQ14BN4 828 aa12.7□□□□□ -0.38
LAMB1-203ENST00000393560 SARM1Q6SZW1 724 aa12.7□□□□□ -0.38
LAMB1-203ENST00000393560 C3orf67Q6ZVT6 689 aa12.7□□□□□ -0.38
LAMB1-203ENST00000393560 MPHOSPH8Q99549 860 aa12.7□□□□□ -0.38
LAMB1-203ENST00000393560 KIF20BQ96Q89 1820 aa12.7□□□□□ -0.38
LAMB1-203ENST00000393560 SH3BP5O60239 455 aa12.7□□□□□ -0.38
LAMB1-203ENST00000393560 MCM3P25205 808 aa12.7□□□□□ -0.38
LAMB1-203ENST00000393560 MATR3P43243 847 aaKnown RBP eCLIP12.7□□□□□ -0.38
LAMB1-203ENST00000393560 AARSP49588 968 aaKnown RBP eCLIP12.7□□□□□ -0.38
LAMB1-203ENST00000393560 ARMCX5Q6P1M9 558 aa12.7□□□□□ -0.38
LAMB1-203ENST00000393560 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.7□□□□□ -0.38
LAMB1-203ENST00000393560 KNDC1Q76NI1 1749 aa12.7□□□□□ -0.38
LAMB1-203ENST00000393560 TMEM247A6NEH6 219 aa12.7□□□□□ -0.38
LAMB1-203ENST00000393560 POTEB2H3BUK9 544 aa12.7□□□□□ -0.38
LAMB1-203ENST00000393560 N4BP3O15049 544 aa12.7□□□□□ -0.38
LAMB1-203ENST00000393560 TMCC1O94876 653 aa12.7□□□□□ -0.38
LAMB1-203ENST00000393560 NFKBIAP25963 317 aa12.7□□□□□ -0.38
LAMB1-203ENST00000393560 MLH1P40692 756 aa12.7□□□□□ -0.38
LAMB1-203ENST00000393560 TUFMP49411 452 aaKnown RBP12.7□□□□□ -0.38
LAMB1-203ENST00000393560 CLEC4GQ6UXB4 293 aa12.7□□□□□ -0.38
LAMB1-203ENST00000393560 SPATA17Q96L03 361 aa12.7□□□□□ -0.38
LAMB1-203ENST00000393560 TCHPQ9BT92 498 aa12.7□□□□□ -0.38
LAMB1-203ENST00000393560 EFR3BQ9Y2G0 817 aa12.7□□□□□ -0.38
LAMB1-203ENST00000393560 MAP2P11137 1827 aaKnown RBP12.69□□□□□ -0.38
LAMB1-203ENST00000393560 PNPLA6Q8IY17 1366 aa12.69□□□□□ -0.38
LAMB1-203ENST00000393560 ENPP1P22413 925 aa12.69□□□□□ -0.38
LAMB1-203ENST00000393560 ALDH1L2Q3SY69 923 aa12.69□□□□□ -0.38
LAMB1-203ENST00000393560 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.69□□□□□ -0.38
LAMB1-203ENST00000393560 NBPF14Q5TI25 921 aa12.69□□□□□ -0.38
LAMB1-203ENST00000393560 TMEM53Q6P2H8 277 aa12.69□□□□□ -0.38
LAMB1-203ENST00000393560 ARHGAP18Q8N392 663 aa12.69□□□□□ -0.38
LAMB1-203ENST00000393560 CCDC155Q8N6L0 562 aa12.69□□□□□ -0.38
LAMB1-203ENST00000393560 IWS1Q96ST2 819 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms