RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 MIGA2Q7L4E1 593 aa12.61□□□□□ -0.39
PDGFD-202ENST00000393158 WNT7AO00755 349 aa12.61□□□□□ -0.39
PDGFD-202ENST00000393158 F13A1P00488 732 aa12.61□□□□□ -0.39
PDGFD-202ENST00000393158 ECE1P42892 770 aa12.61□□□□□ -0.39
PDGFD-202ENST00000393158 EARS2Q5JPH6 523 aaKnown RBP12.61□□□□□ -0.39
PDGFD-202ENST00000393158 FAM173BQ6P4H8 233 aa12.61□□□□□ -0.39
PDGFD-202ENST00000393158 UBAC1Q9BSL1 405 aa12.61□□□□□ -0.39
PDGFD-202ENST00000393158 MKNK2Q9HBH9 465 aa12.61□□□□□ -0.39
PDGFD-202ENST00000393158 GLTPD2A6NH11 291 aa12.61□□□□□ -0.39
PDGFD-202ENST00000393158 DGKZQ13574 1117 aa12.61□□□□□ -0.39
PDGFD-202ENST00000393158 NOM1Q5C9Z4 860 aaKnown RBP12.61□□□□□ -0.39
PDGFD-202ENST00000393158 POTEEQ6S8J3 1075 aa12.61□□□□□ -0.39
PDGFD-202ENST00000393158 IQCA1Q86XH1 822 aa12.61□□□□□ -0.39
PDGFD-202ENST00000393158 TMTC2Q8N394 836 aa12.61□□□□□ -0.39
PDGFD-202ENST00000393158 EEF2P13639 858 aaKnown RBP12.6□□□□□ -0.39
PDGFD-202ENST00000393158 FBXO18Q8NFZ0 1043 aa12.6□□□□□ -0.39
PDGFD-202ENST00000393158 GGA3Q9NZ52 723 aa12.6□□□□□ -0.39
PDGFD-202ENST00000393158 RBM26Q5T8P6 1007 aaKnown RBP12.6□□□□□ -0.39
PDGFD-202ENST00000393158 SMC3Q9UQE7 1217 aa12.6□□□□□ -0.39
PDGFD-202ENST00000393158 WDR81Q562E7 1941 aa12.6□□□□□ -0.39
PDGFD-202ENST00000393158 hCG_1642624A0A1W2PR95 340 aa12.6□□□□□ -0.39
PDGFD-202ENST00000393158 GOLGA8AA7E2F4 631 aa12.6□□□□□ -0.39
PDGFD-202ENST00000393158 CAP2P40123 477 aa12.6□□□□□ -0.39
PDGFD-202ENST00000393158 USP17L2Q6R6M4 530 aa12.6□□□□□ -0.39
PDGFD-202ENST00000393158 ACER1Q8TDN7 264 aa12.6□□□□□ -0.39
PDGFD-202ENST00000393158 TOMM22Q9NS69 142 aa12.6□□□□□ -0.39
PDGFD-202ENST00000393158 GH2P01242 217 aa12.59□□□□□ -0.39
PDGFD-202ENST00000393158 RTN1Q16799 776 aa12.59□□□□□ -0.39
PDGFD-202ENST00000393158 CERKLQ49MI3 558 aaPredicted RBP12.59□□□□□ -0.39
PDGFD-202ENST00000393158 CCDC84Q86UT8 332 aaPredicted RBP12.59□□□□□ -0.39
PDGFD-202ENST00000393158 LRRC47Q8N1G4 583 aaKnown RBP12.59□□□□□ -0.39
PDGFD-202ENST00000393158 RIOX1Q9H6W3 641 aa12.59□□□□□ -0.39
PDGFD-202ENST00000393158 VEZTQ9HBM0 779 aa12.59□□□□□ -0.39
PDGFD-202ENST00000393158 NYAP2Q9P242 653 aa12.59□□□□□ -0.39
PDGFD-202ENST00000393158 SLC3A2P08195 630 aaKnown RBP12.59□□□□□ -0.39
PDGFD-202ENST00000393158 GOLGA8HP0CJ92 632 aa12.59□□□□□ -0.39
PDGFD-202ENST00000393158 ADARB2Q9NS39 739 aaKnown RBP12.59□□□□□ -0.39
PDGFD-202ENST00000393158 LMBRD1Q9NUN5 540 aa12.59□□□□□ -0.39
PDGFD-202ENST00000393158 ZBTB21Q9ULJ3 1066 aa12.59□□□□□ -0.39
PDGFD-202ENST00000393158 CCDC69A6NI79 296 aa12.59□□□□□ -0.39
PDGFD-202ENST00000393158 PRPF3O43395 683 aaKnown RBP12.59□□□□□ -0.39
PDGFD-202ENST00000393158 TTLL1O95922 423 aa12.59□□□□□ -0.39
PDGFD-202ENST00000393158 ZNF444Q8N0Y2 327 aaPredicted RBP12.59□□□□□ -0.39
PDGFD-202ENST00000393158 GMCL1P1Q8NEA9 526 aa12.59□□□□□ -0.39
PDGFD-202ENST00000393158 FTOQ9C0B1 505 aaKnown RBP eCLIP12.59□□□□□ -0.39
PDGFD-202ENST00000393158 U2AF2P26368 475 aaKnown RBP eCLIP12.58□□□□□ -0.4
PDGFD-202ENST00000393158 PHF20Q9BVI0 1012 aa12.58□□□□□ -0.4
PDGFD-202ENST00000393158 RNF26Q9BY78 433 aaPredicted RBP12.58□□□□□ -0.4
PDGFD-202ENST00000393158 TOP1P11387 765 aaKnown RBP12.58□□□□□ -0.4
PDGFD-202ENST00000393158 TTBK2Q6IQ55 1244 aa12.58□□□□□ -0.4
PDGFD-202ENST00000393158 TMEM87AQ8NBN3 555 aa12.58□□□□□ -0.4
PDGFD-202ENST00000393158 MCM4P33991 863 aa12.58□□□□□ -0.4
PDGFD-202ENST00000393158 TOB1P50616 345 aaPredicted RBP12.58□□□□□ -0.4
PDGFD-202ENST00000393158 TMEM179Q6ZVK1 233 aa12.58□□□□□ -0.4
PDGFD-202ENST00000393158 DHX37Q8IY37 1157 aaKnown RBP12.58□□□□□ -0.4
PDGFD-202ENST00000393158 OXER1Q8TDS5 423 aa12.58□□□□□ -0.4
PDGFD-202ENST00000393158 ADM5C9JUS6 153 aa12.57□□□□□ -0.4
PDGFD-202ENST00000393158 HLA-DOAP06340 250 aa12.57□□□□□ -0.4
PDGFD-202ENST00000393158 NUCB2P80303 420 aa12.57□□□□□ -0.4
PDGFD-202ENST00000393158 KIF23Q02241 960 aaPredicted RBP12.57□□□□□ -0.4
PDGFD-202ENST00000393158 CCDC17Q96LX7 622 aa12.57□□□□□ -0.4
PDGFD-202ENST00000393158 P2RX7Q99572 595 aaKnown RBP12.57□□□□□ -0.4
PDGFD-202ENST00000393158 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.57□□□□□ -0.4
PDGFD-202ENST00000393158 USP2O75604 605 aaPredicted RBP12.57□□□□□ -0.4
PDGFD-202ENST00000393158 INPP5BP32019 993 aa12.57□□□□□ -0.4
PDGFD-202ENST00000393158 ZNF543Q08ER8 600 aa12.57□□□□□ -0.4
PDGFD-202ENST00000393158 LARP1BQ659C4 914 aaKnown RBP12.57□□□□□ -0.4
PDGFD-202ENST00000393158 KLRG1Q96E93 195 aa12.57□□□□□ -0.4
PDGFD-202ENST00000393158 SPZ1Q9BXG8 430 aa12.57□□□□□ -0.4
PDGFD-202ENST00000393158 TAF1DQ9H5J8 278 aaPredicted RBP12.57□□□□□ -0.4
PDGFD-202ENST00000393158 STX8Q9UNK0 236 aa12.57□□□□□ -0.4
PDGFD-202ENST00000393158 OPLAHO14841 1288 aa12.57□□□□□ -0.4
PDGFD-202ENST00000393158 FMR1Q06787 632 aaKnown RBP eCLIP12.57□□□□□ -0.4
PDGFD-202ENST00000393158 SART3Q15020 963 aaKnown RBP12.57□□□□□ -0.4
PDGFD-202ENST00000393158 FOXD4L5Q5VV16 416 aaPredicted RBP12.57□□□□□ -0.4
PDGFD-202ENST00000393158 FOXD4L4Q8WXT5 416 aaPredicted RBP12.57□□□□□ -0.4
PDGFD-202ENST00000393158 ORC3Q9UBD5 711 aaPredicted RBP12.57□□□□□ -0.4
PDGFD-202ENST00000393158 CLIP2Q9UDT6 1046 aa12.57□□□□□ -0.4
PDGFD-202ENST00000393158 HMGN5P82970 282 aaKnown RBP12.56□□□□□ -0.4
PDGFD-202ENST00000393158 PPP2R5BQ15173 497 aa12.56□□□□□ -0.4
PDGFD-202ENST00000393158 PFKFB3Q16875 520 aaPredicted RBP12.56□□□□□ -0.4
PDGFD-202ENST00000393158 ABCB5Q2M3G0 1257 aa12.56□□□□□ -0.4
PDGFD-202ENST00000393158 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.56□□□□□ -0.4
PDGFD-202ENST00000393158 GPT2Q8TD30 523 aa12.56□□□□□ -0.4
PDGFD-202ENST00000393158 ARID3AQ99856 593 aa12.56□□□□□ -0.4
PDGFD-202ENST00000393158 TMX2Q9Y320 296 aa12.56□□□□□ -0.4
PDGFD-202ENST00000393158 NFXL1Q6ZNB6 911 aa12.56□□□□□ -0.4
PDGFD-202ENST00000393158 CATIPQ7Z7H3 387 aa12.56□□□□□ -0.4
PDGFD-202ENST00000393158 WDR33Q9C0J8 1336 aaKnown RBP12.56□□□□□ -0.4
PDGFD-202ENST00000393158 FAM205CA6NFA0 338 aa12.56□□□□□ -0.4
PDGFD-202ENST00000393158 CCDC82Q8N4S0 544 aa12.56□□□□□ -0.4
PDGFD-202ENST00000393158 NUP133Q8WUM0 1156 aa12.56□□□□□ -0.4
PDGFD-202ENST00000393158 NAP1L5Q96NT1 182 aaPredicted RBP12.56□□□□□ -0.4
PDGFD-202ENST00000393158 SYNPO2Q9UMS6 1093 aa12.56□□□□□ -0.4
PDGFD-202ENST00000393158 MMP1P03956 469 aa12.55□□□□□ -0.4
PDGFD-202ENST00000393158 DNM1Q05193 864 aaKnown RBP12.55□□□□□ -0.4
PDGFD-202ENST00000393158 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.55□□□□□ -0.4
PDGFD-202ENST00000393158 GMCL1Q96IK5 515 aa12.55□□□□□ -0.4
PDGFD-202ENST00000393158 JMJD4Q9H9V9 463 aa12.55□□□□□ -0.4
PDGFD-202ENST00000393158 RBM28Q9NW13 759 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms